RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 H3BNC9 293 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 I3L4J1 428 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 ATMINO43313 823 aaPredicted RBP16.97■□□□□ 0.31
C9orf78-201ENST00000372447 CALCAP01258 141 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 SCN1AP35498 2009 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 TNNT3P45378 269 aaPredicted RBP16.97■□□□□ 0.31
C9orf78-201ENST00000372447 TAF6P49848 677 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 KRT17Q04695 432 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 GPS2Q13227 327 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 FUT10Q6P4F1 479 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 TAS1R1Q7RTX1 841 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 SPPL3Q8TCT6 385 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 AENQ8WTP8 325 aaKnown RBP16.97■□□□□ 0.31
C9orf78-201ENST00000372447 C11orf84Q9BUA3 381 aaPredicted RBP16.97■□□□□ 0.31
C9orf78-201ENST00000372447 NUP85Q9BW27 656 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 IMPG2Q9BZV3 1241 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 XYLT2Q9H1B5 865 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 CARD9Q9H257 536 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 VIPAS39Q9H9C1 493 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 UVRAGQ9P2Y5 699 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 CHORDC1Q9UHD1 332 aaPredicted RBP16.97■□□□□ 0.31
C9orf78-201ENST00000372447 PCDHB4Q9Y5E5 795 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 KPNA7A9QM74 516 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 MIF4GDA9UHW6 222 aaKnown RBP16.97■□□□□ 0.31
C9orf78-201ENST00000372447 GLI1P08151 1106 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 UNGP13051 313 aaPredicted RBP16.97■□□□□ 0.31
C9orf78-201ENST00000372447 PNPLA4P41247 253 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 AARSP49588 968 aaKnown RBP eCLIP16.97■□□□□ 0.31
C9orf78-201ENST00000372447 GPM6BQ13491 265 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 DDX53Q86TM3 631 aaKnown RBP16.97■□□□□ 0.31
C9orf78-201ENST00000372447 IFT20Q8IY31 132 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 RNF168Q8IYW5 571 aaPredicted RBP16.97■□□□□ 0.31
C9orf78-201ENST00000372447 ZNF564Q8TBZ8 553 aaPredicted RBP16.97■□□□□ 0.31
C9orf78-201ENST00000372447 UBE2Q2Q8WVN8 375 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 ZNF560Q96MR9 790 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 GDF3Q9NR23 364 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 CNTN6Q9UQ52 1028 aa16.97■□□□□ 0.31
C9orf78-201ENST00000372447 NLRC5Q86WI3 1866 aa16.96■□□□□ 0.31
C9orf78-201ENST00000372447 TMEM265A0A087WTH1 108 aa16.96■□□□□ 0.31
C9orf78-201ENST00000372447 CCDC188H7C350 402 aa16.96■□□□□ 0.31
C9orf78-201ENST00000372447 RFXAPO00287 272 aa16.96■□□□□ 0.31
C9orf78-201ENST00000372447 KRIT1O00522 736 aa16.96■□□□□ 0.31
C9orf78-201ENST00000372447 GRM6O15303 877 aa16.96■□□□□ 0.31
C9orf78-201ENST00000372447 CLSTN1O94985 981 aa16.96■□□□□ 0.31
C9orf78-201ENST00000372447 HEXIM1O94992 359 aaKnown RBP16.96■□□□□ 0.31
C9orf78-201ENST00000372447 ASS1P00966 412 aaKnown RBP16.96■□□□□ 0.31
C9orf78-201ENST00000372447 DNAJB1P25685 340 aa16.96■□□□□ 0.31
C9orf78-201ENST00000372447 MYO1EQ12965 1108 aa16.96■□□□□ 0.31
C9orf78-201ENST00000372447 DCAF12L1Q5VU92 463 aa16.96■□□□□ 0.31
C9orf78-201ENST00000372447 TMEM270Q6UE05 265 aa16.96■□□□□ 0.31
C9orf78-201ENST00000372447 KLHL7Q8IXQ5 586 aa16.96■□□□□ 0.31
C9orf78-201ENST00000372447 SUSD3Q96L08 255 aa16.96■□□□□ 0.31
C9orf78-201ENST00000372447 AP1M1Q9BXS5 423 aa16.96■□□□□ 0.31
C9orf78-201ENST00000372447 SF3B1O75533 1304 aaKnown RBP eCLIP16.96■□□□□ 0.3
C9orf78-201ENST00000372447 TMEM110-MUSTN1A8MSY1 372 aa16.95■□□□□ 0.3
C9orf78-201ENST00000372447 RAD51CO43502 376 aa16.95■□□□□ 0.3
C9orf78-201ENST00000372447 TRAPPC3O43617 180 aa16.95■□□□□ 0.3
C9orf78-201ENST00000372447 OAS2P29728 719 aaKnown RBP16.95■□□□□ 0.3
C9orf78-201ENST00000372447 ATICP31939 592 aa16.95■□□□□ 0.3
C9orf78-201ENST00000372447 GABPB1Q06547 395 aaPredicted RBP16.95■□□□□ 0.3
C9orf78-201ENST00000372447 CAMK1Q14012 370 aa16.95■□□□□ 0.3
C9orf78-201ENST00000372447 MESDQ14696 234 aa16.95■□□□□ 0.3
C9orf78-201ENST00000372447 SGSM1Q2NKQ1 1148 aa16.95■□□□□ 0.3
C9orf78-201ENST00000372447 SV2CQ496J9 727 aa16.95■□□□□ 0.3
C9orf78-201ENST00000372447 GLIPR1L2Q4G1C9 344 aa16.95■□□□□ 0.3
C9orf78-201ENST00000372447 FAM171A1Q5VUB5 890 aa16.95■□□□□ 0.3
C9orf78-201ENST00000372447 VPS52Q8N1B4 723 aa16.95■□□□□ 0.3
C9orf78-201ENST00000372447 UBL4BQ8N7F7 174 aa16.95■□□□□ 0.3
C9orf78-201ENST00000372447 POF1BQ8WVV4 589 aa16.95■□□□□ 0.3
C9orf78-201ENST00000372447 B3GALT6Q96L58 329 aa16.95■□□□□ 0.3
C9orf78-201ENST00000372447 SENP8Q96LD8 212 aa16.95■□□□□ 0.3
C9orf78-201ENST00000372447 ACBD3Q9H3P7 528 aa16.95■□□□□ 0.3
C9orf78-201ENST00000372447 VRTNQ9H8Y1 702 aa16.95■□□□□ 0.3
C9orf78-201ENST00000372447 CNOT8Q9UFF9 292 aaKnown RBP16.95■□□□□ 0.3
C9orf78-201ENST00000372447 LZTS1Q9Y250 596 aa16.95■□□□□ 0.3
C9orf78-201ENST00000372447 MYO9BQ13459 2157 aa16.95■□□□□ 0.3
C9orf78-201ENST00000372447 M0QZQ0 153 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 STAU1O95793 577 aaKnown RBP16.94■□□□□ 0.3
C9orf78-201ENST00000372447 FGGP02679 453 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 SOD2P04179 222 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 CYP1A1P04798 512 aaPredicted RBP16.94■□□□□ 0.3
C9orf78-201ENST00000372447 COMTP21964 271 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 GUCY2DQ02846 1103 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 ELAVL2Q12926 359 aaKnown RBP16.94■□□□□ 0.3
C9orf78-201ENST00000372447 ZNF699Q32M78 642 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 WDR72Q3MJ13 1102 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 DSTYKQ6XUX3 929 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 MCOLN2Q8IZK6 566 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 RBBP8NLQ8NC74 664 aaPredicted RBP16.94■□□□□ 0.3
C9orf78-201ENST00000372447 GDPD5Q8WTR4 605 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 ALG3Q92685 438 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 EPB41L5Q9HCM4 733 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 GDAP2Q9NXN4 497 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 SNX9Q9Y5X1 595 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 CYB561D2O14569 222 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 LPXNO60711 386 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 MYBL1P10243 752 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 PAX3P23760 479 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 TKTP29401 623 aaKnown RBP16.94■□□□□ 0.3
C9orf78-201ENST00000372447 GNA15P30679 374 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms