RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 TXNDC9O14530 226 aa10.52□□□□□ -0.73
KDM4A-201ENST00000372396 SGPL1O95470 568 aa10.52□□□□□ -0.73
KDM4A-201ENST00000372396 MCF2P10911 925 aa10.52□□□□□ -0.73
KDM4A-201ENST00000372396 HOXD12P35452 270 aa10.52□□□□□ -0.73
KDM4A-201ENST00000372396 ZNF211Q13398 564 aaPredicted RBP10.52□□□□□ -0.73
KDM4A-201ENST00000372396 PPP1R21Q6ZMI0 780 aa10.52□□□□□ -0.73
KDM4A-201ENST00000372396 CAPN12Q6ZSI9 719 aa10.52□□□□□ -0.73
KDM4A-201ENST00000372396 BRSK2Q8IWQ3 736 aa10.52□□□□□ -0.73
KDM4A-201ENST00000372396 VPS52Q8N1B4 723 aa10.52□□□□□ -0.73
KDM4A-201ENST00000372396 SLC30A5Q8TAD4 765 aa10.52□□□□□ -0.73
KDM4A-201ENST00000372396 STK32AQ8WU08 396 aa10.52□□□□□ -0.73
KDM4A-201ENST00000372396 AGAP3Q96P47 875 aa10.52□□□□□ -0.73
KDM4A-201ENST00000372396 MED15Q96RN5 788 aa10.52□□□□□ -0.73
KDM4A-201ENST00000372396 VPS37BQ9H9H4 285 aa10.52□□□□□ -0.73
KDM4A-201ENST00000372396 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.52□□□□□ -0.733e-7■■■■■ 35.6
KDM4A-201ENST00000372396 ANAPC5Q9UJX4 755 aa10.52□□□□□ -0.73
KDM4A-201ENST00000372396 DUSP10Q9Y6W6 482 aa10.52□□□□□ -0.73
KDM4A-201ENST00000372396 C17orf102A2RUQ5 167 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 GLRA2P23416 452 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 FLT3P36888 993 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 CAV1Q03135 178 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 TFDP2Q14188 446 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 CCDC153Q494R4 210 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 CBWD6Q4V339 395 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 CBWD3Q5JTY5 395 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 CBWD5Q5RIA9 395 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 LGSNQ5TDP6 509 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 SCUBE1Q8IWY4 988 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 SOCS4Q8WXH5 440 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 PPP2R3CQ969Q6 453 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 NMD3Q96D46 503 aaKnown RBP10.51□□□□□ -0.73
KDM4A-201ENST00000372396 FGFBP2Q9BYJ0 223 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 DDX47Q9H0S4 455 aaKnown RBP10.51□□□□□ -0.73
KDM4A-201ENST00000372396 UBR3Q6ZT12 1888 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 FARP2O94887 1054 aaPredicted RBP10.51□□□□□ -0.73
KDM4A-201ENST00000372396 RARBP10826 455 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 ARL4AP40617 200 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 AGBL2Q5U5Z8 902 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 ASAP3Q8TDY4 903 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 CPA5Q8WXQ8 436 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 C18orf8Q96DM3 657 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 TNIP3Q96KP6 325 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 IL1RAPL1Q9NZN1 696 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 USP15Q9Y4E8 981 aaPredicted RBP10.51□□□□□ -0.73
KDM4A-201ENST00000372396 ALG6Q9Y672 507 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 LGALS2P05162 132 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 OXCT1P55809 520 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 AGGF1Q8N302 714 aaeCLIP10.51□□□□□ -0.73
KDM4A-201ENST00000372396 USP38Q8NB14 1042 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 POP1Q99575 1024 aaKnown RBP10.51□□□□□ -0.73
KDM4A-201ENST00000372396 CALN1Q9BXU9 219 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 THAP2Q9H0W7 228 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 PALMDQ9NP74 551 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 LAMB1P07942 1786 aa10.51□□□□□ -0.73
KDM4A-201ENST00000372396 A8MXQ7 604 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 S100BP04271 92 aaPredicted RBP10.5□□□□□ -0.73
KDM4A-201ENST00000372396 ITIH3Q06033 890 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 ACVR2BQ13705 512 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 ZNF410Q86VK4 478 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 PACSIN1Q9BY11 444 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 LRFN2Q9ULH4 789 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 ARIH1Q9Y4X5 557 aaPredicted RBP10.5□□□□□ -0.73
KDM4A-201ENST00000372396 A0A0U1RQJ8 604 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 EPHB6O15197 1021 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 ALDH1A1P00352 501 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 ATICP31939 592 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 CARSP49589 748 aaKnown RBP10.5□□□□□ -0.73
KDM4A-201ENST00000372396 RNASELQ05823 741 aaKnown RBP10.5□□□□□ -0.73
KDM4A-201ENST00000372396 DCTN2Q13561 401 aaKnown RBP10.5□□□□□ -0.73
KDM4A-201ENST00000372396 GRIK4Q16099 956 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 APTXQ7Z2E3 356 aaKnown RBP10.5□□□□□ -0.73
KDM4A-201ENST00000372396 PALM2Q8IXS6 379 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 PPP1R14CQ8TAE6 165 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 MTMR12Q9C0I1 747 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 PYGMP11217 842 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 ETS2P15036 469 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 SDC4P31431 198 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 HDAC4P56524 1084 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 PIGHQ14442 188 aaPredicted RBP10.5□□□□□ -0.73
KDM4A-201ENST00000372396 THEM5Q8N1Q8 247 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 RSPH1Q8WYR4 309 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 HPDLQ96IR7 371 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 MS4A14Q96JA4 679 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 SMC6Q96SB8 1091 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 ZNF518BQ9C0D4 1074 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 MRGBPQ9NV56 204 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 SLC38A7Q9NVC3 462 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 NDUFA13Q9P0J0 144 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 UBQLN1Q9UMX0 589 aaKnown RBP10.5□□□□□ -0.73
KDM4A-201ENST00000372396 A0A087WZ62 844 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 STAG3L1P0CL83 205 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 KRT3P12035 628 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 COMTP21964 271 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 PNPLA4P41247 253 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 AMPD2Q01433 879 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 PPP3CAQ08209 521 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 GNASQ5JWF2 1037 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 MEI1Q5TIA1 1274 aa10.5□□□□□ -0.73
KDM4A-201ENST00000372396 SYDE1Q6ZW31 735 aaPredicted RBP10.5□□□□□ -0.73
KDM4A-201ENST00000372396 ARHGEF19Q8IW93 802 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms