RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 TIGD5Q53EQ6 642 aa14.88□□□□□ -0.03
LDB3-204ENST00000372066 EMC10Q5UCC4 262 aa14.88□□□□□ -0.03
LDB3-204ENST00000372066 PTCRAQ6ISU1 281 aaPredicted RBP14.88□□□□□ -0.03
LDB3-204ENST00000372066 RHOT1Q8IXI2 618 aa14.88□□□□□ -0.03
LDB3-204ENST00000372066 GJD3Q8N144 294 aa14.88□□□□□ -0.03
LDB3-204ENST00000372066 GRK7Q8WTQ7 553 aa14.88□□□□□ -0.03
LDB3-204ENST00000372066 TRIM51Q9BSJ1 452 aa14.88□□□□□ -0.03
LDB3-204ENST00000372066 PLEKHA4Q9H4M7 779 aa14.88□□□□□ -0.03
LDB3-204ENST00000372066 ASB7Q9H672 318 aa14.88□□□□□ -0.03
LDB3-204ENST00000372066 CWC15Q9P013 229 aaKnown RBP14.88□□□□□ -0.03
LDB3-204ENST00000372066 MTRF1LQ9UGC7 380 aaKnown RBP14.88□□□□□ -0.03
LDB3-204ENST00000372066 IP6K2Q9UHH9 426 aa14.88□□□□□ -0.03
LDB3-204ENST00000372066 FEZ2Q9UHY8 353 aaPredicted RBP14.88□□□□□ -0.03
LDB3-204ENST00000372066 PLAAQ9Y263 795 aa14.88□□□□□ -0.03
LDB3-204ENST00000372066 NR2E1Q9Y466 385 aa14.88□□□□□ -0.03
LDB3-204ENST00000372066 PTPRSQ13332 1948 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 FAM86C2PA6NEL3 165 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 PI4K2BG5E9Z4 385 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 H3BQ06 376 aaPredicted RBP14.87□□□□□ -0.03
LDB3-204ENST00000372066 MED7O43513 233 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 INSRRP14616 1297 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 IL9P15248 144 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 EIF4BP23588 611 aaKnown RBP14.87□□□□□ -0.03
LDB3-204ENST00000372066 ATICP31939 592 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 SSTR3P32745 418 aaPredicted RBP14.87□□□□□ -0.03
LDB3-204ENST00000372066 CETN2P41208 172 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 MYL6P60660 151 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 SIX1Q15475 284 aaPredicted RBP14.87□□□□□ -0.03
LDB3-204ENST00000372066 TRADDQ15628 312 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 SEZ6Q53EL9 994 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 TCEAL5Q5H9L2 206 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 TAF2Q6P1X5 1199 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 CROCCP2Q86T23 111 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 RSPH3Q86UC2 560 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 DDX42Q86XP3 938 aaKnown RBP eCLIP14.87□□□□□ -0.03
LDB3-204ENST00000372066 NT5DC4Q86YG4 428 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 FIBCD1Q8N539 461 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 BTBD6Q96KE9 485 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 FAM84AQ96KN4 292 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 C11orf70Q9BRQ4 267 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 NEUROG2Q9H2A3 272 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 DPH5Q9H2P9 285 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 CISHQ9NSE2 258 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 STRIP2Q9ULQ0 834 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 HCN4Q9Y3Q4 1203 aa14.87□□□□□ -0.03
LDB3-204ENST00000372066 GRXCR2A6NFK2 248 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 GPR37L1O60883 481 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 ECEL1O95672 775 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 CST3P01034 146 aaPredicted RBP14.86□□□□□ -0.03
LDB3-204ENST00000372066 PAEPP09466 180 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 TFAMQ00059 246 aaKnown RBP14.86□□□□□ -0.03
LDB3-204ENST00000372066 MAMLD1Q13495 774 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 PUS10Q3MIT2 529 aaKnown RBP14.86□□□□□ -0.03
LDB3-204ENST00000372066 TTMPQ5BVD1 217 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 APBB1IPQ7Z5R6 666 aaPredicted RBP14.86□□□□□ -0.03
LDB3-204ENST00000372066 ADAT2Q7Z6V5 191 aaKnown RBP14.86□□□□□ -0.03
LDB3-204ENST00000372066 RPAINQ86UA6 219 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 THNSL1Q8IYQ7 743 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 KATNAL2Q8IYT4 538 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 TTC39CQ8N584 583 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 ARFGAP2Q8N6H7 521 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 FEZF2Q8TBJ5 459 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 TRAPPC12Q8WVT3 735 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 ELMO3Q96BJ8 720 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 C18orf8Q96DM3 657 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 FAM212AQ96EL1 285 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 ATP6V1G3Q96LB4 118 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 BCO2Q9BYV7 579 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 TXLNGYQ9BZA5 131 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 VRTNQ9H8Y1 702 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 ZDHHC18Q9NUE0 388 aa14.86□□□□□ -0.03
LDB3-204ENST00000372066 ERICH4A6NGS2 130 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 ENPP3O14638 875 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 MYZAPP0CAP1 466 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 RARAP10276 462 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 P4HA1P13674 534 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 POLR2BP30876 1174 aaKnown RBP14.85□□□□□ -0.03
LDB3-204ENST00000372066 CTNNB1P35222 781 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 GRIK4Q16099 956 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 ZNF667Q5HYK9 610 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 AGBL2Q5U5Z8 902 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 LRRC38Q5VT99 294 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 EEF1DP3Q658K8 133 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 KDM7AQ6ZMT4 941 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 ZNF410Q86VK4 478 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 CCDC105Q8IYK2 499 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 EXD1Q8NHP7 514 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 DNAJB3Q8WWF6 145 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 DDX27Q96GQ7 796 aaKnown RBP14.85□□□□□ -0.03
LDB3-204ENST00000372066 XYLT2Q9H1B5 865 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 NSUN3Q9H649 340 aaKnown RBP14.85□□□□□ -0.03
LDB3-204ENST00000372066 CYP3A43Q9HB55 503 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 IFT122Q9HBG6 1241 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 TMBIM4Q9HC24 238 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 CHORDC1Q9UHD1 332 aaPredicted RBP14.85□□□□□ -0.03
LDB3-204ENST00000372066 STAU1O95793 577 aaKnown RBP14.85□□□□□ -0.03
LDB3-204ENST00000372066 KRT14P02533 472 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 BMPR1AP36894 532 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 ASPAP45381 313 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 GSCP56915 257 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms