RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 BARX2Q9UMQ3 279 aaPredicted RBP30.39■■■□□ 2.46
SSBP3-204ENST00000371320 RBP5P82980 135 aa30.38■■■□□ 2.45
SSBP3-204ENST00000371320 MPP2Q14168 576 aa30.38■■■□□ 2.45
SSBP3-204ENST00000371320 HP1BP3Q5SSJ5 553 aaPredicted RBP30.38■■■□□ 2.45
SSBP3-204ENST00000371320 LDLRAD1Q5T700 205 aa30.38■■■□□ 2.45
SSBP3-204ENST00000371320 DPY19L2Q6NUT2 758 aa30.38■■■□□ 2.45
SSBP3-204ENST00000371320 CNPY4Q8N129 248 aa30.38■■■□□ 2.45
SSBP3-204ENST00000371320 UBA3Q8TBC4 463 aa30.38■■■□□ 2.45
SSBP3-204ENST00000371320 ADPGKQ9BRR6 497 aa30.38■■■□□ 2.45
SSBP3-204ENST00000371320 KDM4CQ9H3R0 1056 aa30.38■■■□□ 2.45
SSBP3-204ENST00000371320 TMEM51Q9NW97 253 aa30.38■■■□□ 2.45
SSBP3-204ENST00000371320 DPP3Q9NY33 737 aa30.38■■■□□ 2.45
SSBP3-204ENST00000371320 EURLQ9NYK6 297 aa30.38■■■□□ 2.45
SSBP3-204ENST00000371320 ACTL7BQ9Y614 415 aa30.38■■■□□ 2.45
SSBP3-204ENST00000371320 RBM47A0AV96 593 aaKnown RBP30.38■■■□□ 2.45
SSBP3-204ENST00000371320 TSPAN1O60635 241 aa30.38■■■□□ 2.45
SSBP3-204ENST00000371320 MIPP30301 263 aa30.38■■■□□ 2.45
SSBP3-204ENST00000371320 SF3A3Q12874 501 aaKnown RBP eCLIP30.38■■■□□ 2.456e-12■■■■■ 79.1
SSBP3-204ENST00000371320 FASTKD3Q14CZ7 662 aaKnown RBP30.38■■■□□ 2.45
SSBP3-204ENST00000371320 ACAP1Q15027 740 aa30.38■■■□□ 2.45
SSBP3-204ENST00000371320 LACTB2Q53H82 288 aaPredicted RBP30.38■■■□□ 2.45
SSBP3-204ENST00000371320 FAM102AQ5T9C2 384 aaPredicted RBP30.38■■■□□ 2.45
SSBP3-204ENST00000371320 MAP1SQ66K74 1059 aaPredicted RBP30.38■■■□□ 2.45
SSBP3-204ENST00000371320 CENPUQ71F23 418 aa30.38■■■□□ 2.45
SSBP3-204ENST00000371320 PCGF5Q86SE9 256 aa30.38■■■□□ 2.45
SSBP3-204ENST00000371320 MLXIPLQ9NP71 852 aa30.38■■■□□ 2.45
SSBP3-204ENST00000371320 C2CD2Q9Y426 696 aa30.38■■■□□ 2.45
SSBP3-204ENST00000371320 CCT8L1PA6NM43 557 aa30.37■■■□□ 2.45
SSBP3-204ENST00000371320 H3BRB1 525 aa30.37■■■□□ 2.45
SSBP3-204ENST00000371320 CD48P09326 243 aa30.37■■■□□ 2.45
SSBP3-204ENST00000371320 NDST1P52848 882 aa30.37■■■□□ 2.45
SSBP3-204ENST00000371320 TMED2Q15363 201 aa30.37■■■□□ 2.45
SSBP3-204ENST00000371320 CCDC142Q17RM4 750 aa30.37■■■□□ 2.45
SSBP3-204ENST00000371320 PRCCQ92733 491 aaPredicted RBP30.37■■■□□ 2.45
SSBP3-204ENST00000371320 TUT1Q9H6E5 874 aaKnown RBP30.37■■■□□ 2.45
SSBP3-204ENST00000371320 ASNSD1Q9NWL6 643 aa30.37■■■□□ 2.45
SSBP3-204ENST00000371320 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.37■■■□□ 2.45
SSBP3-204ENST00000371320 TCP11X1B4DZS4 312 aa30.37■■■□□ 2.45
SSBP3-204ENST00000371320 DNM1LO00429 736 aa30.37■■■□□ 2.45
SSBP3-204ENST00000371320 ALOX15BO15296 676 aa30.37■■■□□ 2.45
SSBP3-204ENST00000371320 INCA1Q0VD86 236 aa30.37■■■□□ 2.45
SSBP3-204ENST00000371320 SPRED3Q2MJR0 410 aa30.37■■■□□ 2.45
SSBP3-204ENST00000371320 RFX6Q8HWS3 928 aa30.37■■■□□ 2.45
SSBP3-204ENST00000371320 ZBED8Q8IZ13 594 aa30.37■■■□□ 2.45
SSBP3-204ENST00000371320 CMASQ8NFW8 434 aaPredicted RBP30.37■■■□□ 2.45
SSBP3-204ENST00000371320 HSPH1Q92598 858 aa30.37■■■□□ 2.45
SSBP3-204ENST00000371320 C10orf88Q9H8K7 445 aa30.37■■■□□ 2.45
SSBP3-204ENST00000371320 VPS37BQ9H9H4 285 aa30.37■■■□□ 2.45
SSBP3-204ENST00000371320 NKIRAS1Q9NYS0 192 aa30.37■■■□□ 2.45
SSBP3-204ENST00000371320 USP18Q9UMW8 372 aa30.37■■■□□ 2.45
SSBP3-204ENST00000371320 RASA4BC9J798 803 aa30.36■■■□□ 2.45
SSBP3-204ENST00000371320 RASA4O43374 803 aa30.36■■■□□ 2.45
SSBP3-204ENST00000371320 TRUB2O95900 331 aaKnown RBP30.36■■■□□ 2.45
SSBP3-204ENST00000371320 CKAP2Q8WWK9 683 aa30.36■■■□□ 2.45
SSBP3-204ENST00000371320 RSAD2Q8WXG1 361 aa30.36■■■□□ 2.45
SSBP3-204ENST00000371320 MAML1Q92585 1016 aa30.36■■■□□ 2.45
SSBP3-204ENST00000371320 ZSWIM8A7E2V4 1837 aa30.35■■■□□ 2.45
SSBP3-204ENST00000371320 A0A1B0GUA9 196 aa30.35■■■□□ 2.45
SSBP3-204ENST00000371320 GDF10P55107 478 aa30.35■■■□□ 2.45
SSBP3-204ENST00000371320 PDIA2Q13087 525 aaKnown RBP30.35■■■□□ 2.45
SSBP3-204ENST00000371320 ARHGEF18Q6ZSZ5 1173 aa30.35■■■□□ 2.45
SSBP3-204ENST00000371320 GDAP1Q8TB36 358 aa30.35■■■□□ 2.45
SSBP3-204ENST00000371320 CTCFP49711 727 aaPredicted RBP30.35■■■□□ 2.45
SSBP3-204ENST00000371320 TAF5Q15542 800 aa30.35■■■□□ 2.45
SSBP3-204ENST00000371320 KIF12Q96FN5 646 aa30.35■■■□□ 2.45
SSBP3-204ENST00000371320 L3MBTL3Q96JM7 780 aaPredicted RBP30.35■■■□□ 2.45
SSBP3-204ENST00000371320 FARP1Q9Y4F1 1045 aaPredicted RBP30.35■■■□□ 2.45
SSBP3-204ENST00000371320 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.34■■■□□ 2.45
SSBP3-204ENST00000371320 GOLGA8MH3BSY2 632 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 ATP2C2O75185 946 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 STAU1O95793 577 aaKnown RBP30.34■■■□□ 2.45
SSBP3-204ENST00000371320 GHRP10912 638 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 GCAP28676 217 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 RDXP35241 583 aaKnown RBP30.34■■■□□ 2.45
SSBP3-204ENST00000371320 ZNF143P52747 638 aaPredicted RBP30.34■■■□□ 2.45
SSBP3-204ENST00000371320 NR1H3Q13133 447 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 GRIK4Q16099 956 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 NT5DC4Q86YG4 428 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 TDRPQ86YL5 185 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 PPIL6Q8IXY8 311 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 TTC39CQ8N584 583 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 CALN1Q9BXU9 219 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 KIAA1257Q9ULG3 409 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 PDHXO00330 501 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 STX2P32856 288 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 PCK1P35558 622 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 ADCY1Q08828 1119 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 HIF1AQ16665 826 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 LCLAT1Q6UWP7 414 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 CAPN12Q6ZSI9 719 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 NT5C1AQ9BXI3 368 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 KATNBL1Q9H079 304 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 FGFR1OP2Q9NVK5 253 aa30.34■■■□□ 2.45
SSBP3-204ENST00000371320 POC1B-GALNT4F8VUJ3 575 aa30.33■■■□□ 2.45
SSBP3-204ENST00000371320 SNX3O60493 162 aa30.33■■■□□ 2.45
SSBP3-204ENST00000371320 CYP3A5P20815 502 aa30.33■■■□□ 2.45
SSBP3-204ENST00000371320 SCTRP47872 440 aa30.33■■■□□ 2.45
SSBP3-204ENST00000371320 PPP1R21Q6ZMI0 780 aa30.33■■■□□ 2.45
SSBP3-204ENST00000371320 FAM124BQ9H5Z6 455 aaPredicted RBP30.33■■■□□ 2.45
SSBP3-204ENST00000371320 TSPAN16Q9UKR8 245 aa30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms