RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 CHSY1Q86X52 802 aa10.11□□□□□ -0.79
LRRC40-201ENST00000370952 NCAPG2Q86XI2 1143 aa10.11□□□□□ -0.79
LRRC40-201ENST00000370952 IGDCC3Q8IVU1 814 aa10.11□□□□□ -0.79
LRRC40-201ENST00000370952 STKLD1Q8NE28 680 aa10.11□□□□□ -0.79
LRRC40-201ENST00000370952 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.11□□□□□ -0.79
LRRC40-201ENST00000370952 ALKBH8Q96BT7 664 aaKnown RBP10.11□□□□□ -0.79
LRRC40-201ENST00000370952 EBF4Q9BQW3 602 aa10.11□□□□□ -0.79
LRRC40-201ENST00000370952 S100A14Q9HCY8 104 aa10.11□□□□□ -0.79
LRRC40-201ENST00000370952 KCND2Q9NZV8 630 aa10.11□□□□□ -0.79
LRRC40-201ENST00000370952 PCDHAC2Q9Y5I4 1007 aa10.11□□□□□ -0.79
LRRC40-201ENST00000370952 ZNF335Q9H4Z2 1342 aaPredicted RBP10.11□□□□□ -0.79
LRRC40-201ENST00000370952 F8VP50 259 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 C6orf222P0C671 652 aaPredicted RBP10.1□□□□□ -0.79
LRRC40-201ENST00000370952 UQCRBP14927 111 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 CEP55Q53EZ4 464 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 RALGPS1Q5JS13 557 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 TMCO4Q5TGY1 634 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 C12orf56Q8IXR9 622 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 FAM172AQ8WUF8 416 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 LENG1Q96BZ8 264 aaPredicted RBP10.1□□□□□ -0.79
LRRC40-201ENST00000370952 TEKT3Q9BXF9 490 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 IQCGQ9H095 443 aaKnown RBP10.1□□□□□ -0.79
LRRC40-201ENST00000370952 PPCSQ9HAB8 311 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 TMEM165Q9HC07 324 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 PCDH9Q9HC56 1237 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 COQ4Q9Y3A0 265 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 FARP1Q9Y4F1 1045 aaPredicted RBP10.1□□□□□ -0.79
LRRC40-201ENST00000370952 A0A088AWK7 358 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 I3L4J1 428 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 IPO5O00410 1097 aaKnown RBP10.1□□□□□ -0.79
LRRC40-201ENST00000370952 IMPDH2P12268 514 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 VCLP18206 1134 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 TPP2P29144 1249 aaPredicted RBP10.1□□□□□ -0.79
LRRC40-201ENST00000370952 PSMC5P62195 406 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 KBTBD12Q3ZCT8 623 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 MMEL1Q495T6 779 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 FBXL19Q6PCT2 694 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 KCTD17Q8N5Z5 321 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 GDPD5Q8WTR4 605 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 ABTB1Q969K4 478 aaPredicted RBP10.1□□□□□ -0.79
LRRC40-201ENST00000370952 TRIM11Q96F44 468 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 AGBL1Q96MI9 1066 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 PLEKHG4BQ96PX9 1271 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 SRPK1Q96SB4 655 aaKnown RBP10.1□□□□□ -0.79
LRRC40-201ENST00000370952 CCDC28BQ9BUN5 200 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 MIS12Q9H081 205 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 PICK1Q9NRD5 415 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 CNTN3Q9P232 1028 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 IKBKGQ9Y6K9 419 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 NRAPQ86VF7 1730 aa10.1□□□□□ -0.79
LRRC40-201ENST00000370952 DDTLA6NHG4 134 aaPredicted RBP10.09□□□□□ -0.79
LRRC40-201ENST00000370952 COPEO14579 308 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 INHBAP08476 426 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 ATP2B4P23634 1241 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 RARRES1P49788 294 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 NOMO3P69849 1222 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 GTF2BQ00403 316 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 HNRNPDQ14103 355 aaKnown RBP10.09□□□□□ -0.79
LRRC40-201ENST00000370952 PDK3Q15120 406 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 TRIP10Q15642 601 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 CHI3L2Q15782 390 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 DNAL1Q4LDG9 190 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 RBM44Q6ZP01 1051 aaKnown RBP10.09□□□□□ -0.79
LRRC40-201ENST00000370952 ZCCHC23Q6ZST2 131 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 C15orf52Q6ZUT6 534 aaKnown RBP10.09□□□□□ -0.79
LRRC40-201ENST00000370952 MIER3Q7Z3K6 550 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 PPIL6Q8IXY8 311 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 RCOR2Q8IZ40 523 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 PHF12Q96QT6 1004 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 SLC13A1Q9BZW2 595 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 C20orf27Q9GZN8 174 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 CYP4F11Q9HBI6 524 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 MRPL47Q9HD33 250 aaKnown RBP10.09□□□□□ -0.79
LRRC40-201ENST00000370952 C1orf112Q9NSG2 853 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 KCNK4Q9NYG8 393 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 NYAP2Q9P242 653 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 PRR12Q9ULL5 1215 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 PCDHB2Q9Y5E7 798 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 SNCAIPQ9Y6H5 919 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 ZHX2Q9Y6X8 837 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 hCG_1818297A0A087WSY0 165 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 IQANK1A0A1B0GTG1 560 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 MYOCOSA0A1B0GUC4 107 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 FKBP6O75344 327 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 ATP6V1G1O75348 118 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 STIP1P31948 543 aaKnown RBP10.09□□□□□ -0.79
LRRC40-201ENST00000370952 ELK3P41970 407 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 SOX10P56693 466 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 YWHAGP61981 247 aaKnown RBP eCLIP10.09□□□□□ -0.79
LRRC40-201ENST00000370952 IRX4P78413 519 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 BASP1P80723 227 aaKnown RBP10.09□□□□□ -0.79
LRRC40-201ENST00000370952 OTUD4Q01804 1114 aaKnown RBP10.09□□□□□ -0.79
LRRC40-201ENST00000370952 ZNF252P-AS1Q0IIN9 211 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 HIC1Q14526 733 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 GRAMD1BQ3KR37 738 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 EFHC1Q5JVL4 640 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 FAM102BQ5T8I3 360 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 CIAPIN1Q6FI81 312 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 CTAGE3PQ8IX95 158 aa10.09□□□□□ -0.79
LRRC40-201ENST00000370952 RBM12BQ8IXT5 1001 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms