RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 EPHB3P54753 998 aa16.21■□□□□ 0.19
SS18L1-202ENST00000370848 CSTF1Q05048 431 aaKnown RBP16.21■□□□□ 0.19
SS18L1-202ENST00000370848 LRRC63Q05C16 580 aa16.21■□□□□ 0.19
SS18L1-202ENST00000370848 SPOPLQ6IQ16 392 aa16.21■□□□□ 0.19
SS18L1-202ENST00000370848 THEM5Q8N1Q8 247 aa16.21■□□□□ 0.19
SS18L1-202ENST00000370848 GPR161Q8N6U8 529 aaKnown RBP16.21■□□□□ 0.19
SS18L1-202ENST00000370848 C2orf15Q8WU43 125 aaKnown RBP16.21■□□□□ 0.19
SS18L1-202ENST00000370848 MMS19Q96T76 1030 aa16.21■□□□□ 0.19
SS18L1-202ENST00000370848 GTPBP4Q9BZE4 634 aaKnown RBP16.21■□□□□ 0.19
SS18L1-202ENST00000370848 SMYD3Q9H7B4 428 aa16.21■□□□□ 0.19
SS18L1-202ENST00000370848 DDX43Q9NXZ2 648 aaKnown RBP16.21■□□□□ 0.19
SS18L1-202ENST00000370848 NXF1Q9UBU9 619 aaKnown RBP16.21■□□□□ 0.19
SS18L1-202ENST00000370848 ZMYM5Q9UJ78 669 aa16.21■□□□□ 0.19
SS18L1-202ENST00000370848 PIAS3Q9Y6X2 628 aa16.21■□□□□ 0.19
SS18L1-202ENST00000370848 A0A1W2PRU2 124 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 GABRDO14764 452 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 ZNF263O14978 683 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 CLSTN1O94985 981 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 HLA-DRAP01903 254 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 GJA1P17302 382 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 LMO2P25791 158 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 RAP1GAPP47736 663 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 ALDH1A3P47895 512 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 AP3M2P53677 418 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 FKBP3Q00688 224 aaKnown RBP16.2■□□□□ 0.18
SS18L1-202ENST00000370848 ZNF699Q32M78 642 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 WDR72Q3MJ13 1102 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 SCARA5Q6ZMJ2 495 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 ITIH5Q86UX2 942 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 TMEM86AQ8N2M4 240 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 TRIML1Q8N9V2 468 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 TAS1R2Q8TE23 839 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 FAM3CQ92520 227 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 MED15Q96RN5 788 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 PI4K2AQ9BTU6 479 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 C8orf33Q9H7E9 229 aaPredicted RBP16.2■□□□□ 0.18
SS18L1-202ENST00000370848 IL21Q9HBE4 155 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 OBSL1O75147 1896 aa16.2■□□□□ 0.18
SS18L1-202ENST00000370848 MYBPHLA2RUH7 354 aa16.19■□□□□ 0.18
SS18L1-202ENST00000370848 SOBPA7XYQ1 873 aa16.19■□□□□ 0.18
SS18L1-202ENST00000370848 IKBKBO14920 756 aa16.19■□□□□ 0.18
SS18L1-202ENST00000370848 SLC16A3O15427 465 aaKnown RBP16.19■□□□□ 0.18
SS18L1-202ENST00000370848 ATP2C2O75185 946 aa16.19■□□□□ 0.18
SS18L1-202ENST00000370848 STAU1O95793 577 aaKnown RBP16.19■□□□□ 0.18
SS18L1-202ENST00000370848 ATF6P18850 670 aa16.19■□□□□ 0.18
SS18L1-202ENST00000370848 TGM1P22735 817 aa16.19■□□□□ 0.18
SS18L1-202ENST00000370848 PIK3CAP42336 1068 aa16.19■□□□□ 0.18
SS18L1-202ENST00000370848 TUFMP49411 452 aaKnown RBP16.19■□□□□ 0.18
SS18L1-202ENST00000370848 CCR3P51677 355 aa16.19■□□□□ 0.18
SS18L1-202ENST00000370848 NRLP54845 237 aa16.19■□□□□ 0.18
SS18L1-202ENST00000370848 PSMC1P62191 440 aaKnown RBP16.19■□□□□ 0.18
SS18L1-202ENST00000370848 TNNC1P63316 161 aa16.19■□□□□ 0.18
SS18L1-202ENST00000370848 PAK1Q13153 545 aa16.19■□□□□ 0.18
SS18L1-202ENST00000370848 PUM1Q14671 1186 aaKnown RBP eCLIP16.19■□□□□ 0.18
SS18L1-202ENST00000370848 DCAF17Q5H9S7 520 aaPredicted RBP16.19■□□□□ 0.18
SS18L1-202ENST00000370848 INTS6LQ5JSJ4 861 aaKnown RBP16.19■□□□□ 0.18
SS18L1-202ENST00000370848 DNAJB7Q7Z6W7 309 aaPredicted RBP16.19■□□□□ 0.18
SS18L1-202ENST00000370848 KIAA2013Q8IYS2 634 aa16.19■□□□□ 0.18
SS18L1-202ENST00000370848 SPPL2BQ8TCT7 592 aa16.19■□□□□ 0.18
SS18L1-202ENST00000370848 ATRIPQ8WXE1 791 aa16.19■□□□□ 0.18
SS18L1-202ENST00000370848 SYAP1Q96A49 352 aaPredicted RBP16.19■□□□□ 0.18
SS18L1-202ENST00000370848 PKMYT1Q99640 499 aa16.19■□□□□ 0.18
SS18L1-202ENST00000370848 LPIN3Q9BQK8 851 aa16.19■□□□□ 0.18
SS18L1-202ENST00000370848 SDCBP2Q9H190 292 aa16.19■□□□□ 0.18
SS18L1-202ENST00000370848 ABI2Q9NYB9 513 aaPredicted RBP16.19■□□□□ 0.18
SS18L1-202ENST00000370848 SMG5Q9UPR3 1016 aaKnown RBP16.19■□□□□ 0.18
SS18L1-202ENST00000370848 NCOR2Q9Y618 2525 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 PDGFRBP09619 1106 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 WARSP23381 471 aaKnown RBP16.18■□□□□ 0.18
SS18L1-202ENST00000370848 HOXA6P31267 233 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 ATICP31939 592 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 PPP1R2P41236 205 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 GPR15P49685 360 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 CDH8P55286 799 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 MCCD1P59942 119 aaPredicted RBP16.18■□□□□ 0.18
SS18L1-202ENST00000370848 MYL7Q01449 175 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 TSPY1Q01534 308 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 GAS6Q14393 721 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 PPP2R5DQ14738 602 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 CBWD6Q4V339 395 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 ARHGAP29Q52LW3 1261 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 WDR44Q5JSH3 913 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 CBWD3Q5JTY5 395 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 CBWD5Q5RIA9 395 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 STXBP5Q5T5C0 1151 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 TCERG1LQ5VWI1 586 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 RALGPS2Q86X27 583 aaPredicted RBP16.18■□□□□ 0.18
SS18L1-202ENST00000370848 ARID3BQ8IVW6 561 aaPredicted RBP16.18■□□□□ 0.18
SS18L1-202ENST00000370848 DCLK2Q8N568 766 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 SEMA4DQ92854 862 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 LRRC3BQ96PB8 259 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 SEPT5Q99719 369 aaPredicted RBP16.18■□□□□ 0.18
SS18L1-202ENST00000370848 SYT15Q9BQS2 421 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 ACBD6Q9BR61 282 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 DPEP3Q9H4B8 488 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 VRTNQ9H8Y1 702 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 APOBEC3GQ9HC16 384 aaKnown RBP16.18■□□□□ 0.18
SS18L1-202ENST00000370848 TMEM8AQ9HCN3 771 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 CRTAC1Q9NQ79 661 aa16.18■□□□□ 0.18
SS18L1-202ENST00000370848 GTF3C4Q9UKN8 822 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms