RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 PSMA4P25789 261 aaKnown RBP17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 SREBF1P36956 1147 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 RECQLP46063 649 aaPredicted RBP17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 DEFA1P59665 94 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 DEFA3P59666 94 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 ITGB3BPQ13352 177 aaPredicted RBP17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 COG2Q14746 738 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 OASLQ15646 514 aaKnown RBP17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 SMIM5Q71RC9 77 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 MICU2Q8IYU8 434 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 CENPTQ96BT3 561 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 GPRC5CQ9NQ84 441 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 SCN3BQ9NY72 215 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 MYBL2P10244 700 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 RARAP10276 462 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 TGM2P21980 687 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 IPMKQ8NFU5 416 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 NINJ2Q9NZG7 142 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 V9GYQ6 96 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 TCRBV5S4A2TA0A5A2 114 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 FCHO1O14526 889 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 WDR47O94967 919 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 MYBPC2Q14324 1141 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 TAGAPQ8N103 731 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 RDM1Q8NG50 284 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 USP6NLQ92738 828 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 ASIC4Q96FT7 647 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 PNMA5Q96PV4 448 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 MYLK2Q9H1R3 596 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 PCDH9Q9HC56 1237 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 LRRC4BQ9NT99 713 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 MYO1GB0I1T2 1018 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 RALBP11234 206 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 CLEC16AQ2KHT3 1053 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 GOLGA7BQ2TAP0 167 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 DCAF6Q58WW2 860 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 MREGQ8N565 214 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 VPS50Q96JG6 964 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 NAT9Q9BTE0 207 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 NRXN1Q9ULB1 1477 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 TXNP10599 105 aaKnown RBP17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 TFE3P19532 575 aaPredicted RBP17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 FAM83EQ2M2I3 478 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 TRIM60Q495X7 471 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 SPDYAQ5MJ70 313 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 IRGCQ6NXR0 463 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 TMC2Q8TDI7 906 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 PPP1R2P1Q96PQ5 205 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 SIK3Q9Y2K2 1263 aa17.78■□□□□ 0.44
PTP4A1-201ENST00000370651 SDR42E2A6NKP2 422 aa17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 H2AFYO75367 372 aaKnown RBP17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 NDUFS3O75489 264 aa17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 MAP3K6O95382 1288 aa17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 KLRK1P26718 216 aa17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 R3HDM1Q15032 1099 aaKnown RBP17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 KIZQ2M2Z5 673 aa17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 ACTL9Q8TC94 416 aa17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 CHD1O14646 1710 aa17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 ADGRA3Q8IWK6 1321 aa17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 ZNF263O14978 683 aa17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 CBX6O95503 412 aa17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 KRT72Q14CN4 511 aa17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 LRRC74BQ6ZQY2 392 aa17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 TCP10LQ8TDR4 215 aa17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 SLC35C1Q96A29 364 aa17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 SLC10A4Q96EP9 437 aa17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 MMP19Q99542 508 aa17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 VCAM1P19320 739 aa17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 DENND1BQ6P3S1 775 aa17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 PRCCQ92733 491 aaPredicted RBP17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 FAM162AQ96A26 154 aa17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 PABPC5Q96DU9 382 aaKnown RBP17.77■□□□□ 0.44
PTP4A1-201ENST00000370651 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.77■□□□□ 0.442e-10■■□□□ 13.2
PTP4A1-201ENST00000370651 SUPT3HB4E1H0 165 aa17.77■□□□□ 0.43
PTP4A1-201ENST00000370651 USP1O94782 785 aa17.77■□□□□ 0.43
PTP4A1-201ENST00000370651 CNTFP26441 200 aa17.77■□□□□ 0.43
PTP4A1-201ENST00000370651 SERPINB8P50452 374 aa17.77■□□□□ 0.43
PTP4A1-201ENST00000370651 SEL1L3Q68CR1 1132 aa17.77■□□□□ 0.43
PTP4A1-201ENST00000370651 PRR5LQ6MZQ0 368 aa17.77■□□□□ 0.43
PTP4A1-201ENST00000370651 AGBL1Q96MI9 1066 aa17.77■□□□□ 0.43
PTP4A1-201ENST00000370651 RIC8BQ9NVN3 520 aa17.77■□□□□ 0.43
PTP4A1-201ENST00000370651 DNALI1O14645 258 aaPredicted RBP17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 SNX3O60493 162 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 KRT75O95678 551 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 VCPP55072 806 aaKnown RBP17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 PCSK7Q16549 785 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 HPDLQ96IR7 371 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 ZNF518BQ9C0D4 1074 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 PCDHA3Q9Y5H8 950 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 E9PBE3 544 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 ZNF197O14709 1029 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 KLHL41O60662 606 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 PTK6Q13882 451 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 XRRA1Q6P2D8 792 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 DENND5BQ6ZUT9 1274 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 EFL1Q7Z2Z2 1120 aaKnown RBP17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 ADGRA1Q86SQ6 560 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 DEFB107AQ8IZN7 70 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 POP1Q99575 1024 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms