RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 CHI3L1P36222 383 aaPredicted RBP8.88□□□□□ -0.99
ABCA4-201ENST00000370225 CBWD2Q8IUF1 395 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 STX19Q8N4C7 294 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 EDEM1Q92611 657 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 PDGFDQ9GZP0 370 aaPredicted RBP8.88□□□□□ -0.99
ABCA4-201ENST00000370225 RSAD1Q9HA92 442 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 CYTH3O43739 400 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 CHN1P15882 459 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 OXCT1P55809 520 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 PGS1Q32NB8 556 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 ZNF484Q5JVG2 852 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 RABGAP1LQ5R372 815 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 GRAMD4Q6IC98 578 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 MPZL3Q6UWV2 235 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 SH2D3CQ8N5H7 860 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 ANKEF1Q9NU02 776 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 PKD2L2Q9NZM6 624 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 PLA2G4CQ9UP65 541 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 MRFAP1Q9Y605 127 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 ADCY3O60266 1144 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 VEGFAP15692 232 aaPredicted RBP8.88□□□□□ -0.99
ABCA4-201ENST00000370225 TBL3Q12788 808 aaKnown RBP8.88□□□□□ -0.99
ABCA4-201ENST00000370225 MROH8Q9H579 483 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 AGPAT3Q9NRZ7 376 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 PAK5Q9P286 719 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 PSMC3IPQ9P2W1 217 aaPredicted RBP8.88□□□□□ -0.99
ABCA4-201ENST00000370225 USP20Q9Y2K6 914 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 RIMS1Q86UR5 1692 aaKnown RBP8.88□□□□□ -0.99
ABCA4-201ENST00000370225 ACAT1P24752 427 aaKnown RBP8.88□□□□□ -0.99
ABCA4-201ENST00000370225 BEX3Q00994 111 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 ACTN3Q08043 901 aaPredicted RBP8.88□□□□□ -0.99
ABCA4-201ENST00000370225 CAMK2GQ13555 558 aaPredicted RBP8.88□□□□□ -0.99
ABCA4-201ENST00000370225 TP53BP2Q13625 1128 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 LAMB3Q13751 1172 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 LLGL2Q6P1M3 1020 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 THAP2Q9H0W7 228 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 COPS7BQ9H9Q2 264 aaPredicted RBP8.88□□□□□ -0.99
ABCA4-201ENST00000370225 NOP53Q9NZM5 478 aaKnown RBP8.88□□□□□ -0.99
ABCA4-201ENST00000370225 TRPM5Q9NZQ8 1165 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 NEXMIFQ5QGS0 1516 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 ATP5HO75947 161 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 BTG3Q14201 252 aaPredicted RBP8.88□□□□□ -0.99
ABCA4-201ENST00000370225 INPP5AQ14642 412 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 UGP2Q16851 508 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 CALML6Q8TD86 181 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 TRAPPC12Q8WVT3 735 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 P4HA2O15460 535 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 EGFRP00533 1210 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 TGM2P21980 687 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 SPRP35270 261 aaPredicted RBP8.88□□□□□ -0.99
ABCA4-201ENST00000370225 GLRBP48167 497 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 GCLCP48506 637 aaPredicted RBP8.88□□□□□ -0.99
ABCA4-201ENST00000370225 PMS1P54277 932 aaKnown RBP8.88□□□□□ -0.99
ABCA4-201ENST00000370225 RAD23BP54727 409 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 PTK6Q13882 451 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 TRADDQ15628 312 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 SLC30A10Q6XR72 485 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 TFAP2DQ7Z6R9 452 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 NT5DC3Q86UY8 548 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 GALNT4Q8N4A0 578 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 CYFIP2Q96F07 1278 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 MED8Q96G25 268 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 WWP1Q9H0M0 922 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 RNF208Q9H0X6 261 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 ZCCHC17Q9NP64 241 aaKnown RBP8.88□□□□□ -0.99
ABCA4-201ENST00000370225 KCNQ5Q9NR82 932 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 SNX12Q9UMY4 172 aa8.88□□□□□ -0.99
ABCA4-201ENST00000370225 DIP2AQ14689 1571 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 RHOCP08134 193 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 CXCL8P10145 99 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 FXR1P51114 621 aaKnown RBP eCLIP8.87□□□□□ -0.99
ABCA4-201ENST00000370225 TGFB2P61812 414 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 CXCL9Q07325 125 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 LAMTOR4Q0VGL1 99 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 NAB2Q15742 525 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 FAM171A1Q5VUB5 890 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 TDRKHQ9Y2W6 561 aaKnown RBP8.87□□□□□ -0.99
ABCA4-201ENST00000370225 ADORA2AP29274 412 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 CTCFP49711 727 aaPredicted RBP8.87□□□□□ -0.99
ABCA4-201ENST00000370225 RHOAP61586 193 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 CHI3L2Q15782 390 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 GRIK4Q16099 956 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 OTOAQ7RTW8 1153 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 KRT35Q92764 455 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 ATXN3LQ9H3M9 355 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 NT5MQ9NPB1 228 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 RBM12Q9NTZ6 932 aaKnown RBP8.87□□□□□ -0.99
ABCA4-201ENST00000370225 USE1Q9NZ43 259 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 CD163L1Q9NR16 1453 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 CCDC159P0C7I6 412 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 RBP3P10745 1247 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 FXR2P51116 673 aaKnown RBP eCLIP8.87□□□□□ -0.99
ABCA4-201ENST00000370225 STARD3Q14849 445 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 RARS2Q5T160 578 aaKnown RBP8.87□□□□□ -0.99
ABCA4-201ENST00000370225 ANKS6Q68DC2 871 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 DOK6Q6PKX4 331 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 C16orf59Q7L2K0 433 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 DDX42Q86XP3 938 aaKnown RBP eCLIP8.87□□□□□ -0.99
ABCA4-201ENST00000370225 HERC6Q8IVU3 1022 aa8.87□□□□□ -0.99
ABCA4-201ENST00000370225 YY1AP1Q9H869 796 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms