RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 HMGN5P82970 282 aaKnown RBP16.56■□□□□ 0.24
SSR4-204ENST00000370087 DHX8Q14562 1220 aaKnown RBP16.56■□□□□ 0.24
SSR4-204ENST00000370087 LRSAM1Q6UWE0 723 aa16.56■□□□□ 0.24
SSR4-204ENST00000370087 TTC30AQ86WT1 665 aa16.56■□□□□ 0.24
SSR4-204ENST00000370087 FAM184AQ8NB25 1140 aa16.56■□□□□ 0.24
SSR4-204ENST00000370087 ZSWIM2Q8NEG5 633 aa16.56■□□□□ 0.24
SSR4-204ENST00000370087 OLIG1Q8TAK6 271 aa16.56■□□□□ 0.24
SSR4-204ENST00000370087 LEO1Q8WVC0 666 aaPredicted RBP16.56■□□□□ 0.24
SSR4-204ENST00000370087 TRMT2BQ96GJ1 504 aaKnown RBP16.56■□□□□ 0.24
SSR4-204ENST00000370087 MYRFLQ96LU7 910 aa16.56■□□□□ 0.24
SSR4-204ENST00000370087 FNBP1Q96RU3 617 aa16.56■□□□□ 0.24
SSR4-204ENST00000370087 ASB7Q9H672 318 aa16.56■□□□□ 0.24
SSR4-204ENST00000370087 TMEM206Q9H813 350 aa16.56■□□□□ 0.24
SSR4-204ENST00000370087 BLOC1S4Q9NUP1 217 aa16.56■□□□□ 0.24
SSR4-204ENST00000370087 MBD1Q9UIS9 605 aaPredicted RBP16.56■□□□□ 0.24
SSR4-204ENST00000370087 MMP17Q9ULZ9 603 aa16.56■□□□□ 0.24
SSR4-204ENST00000370087 MYOFQ9NZM1 2061 aa16.56■□□□□ 0.24
SSR4-204ENST00000370087 SMG1Q96Q15 3661 aaKnown RBP16.56■□□□□ 0.24
SSR4-204ENST00000370087 PI4KAP42356 2102 aa16.55■□□□□ 0.24
SSR4-204ENST00000370087 FASNP49327 2511 aaKnown RBP16.55■□□□□ 0.24
SSR4-204ENST00000370087 ADAMTS20P59510 1910 aa16.55■□□□□ 0.24
SSR4-204ENST00000370087 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.55■□□□□ 0.24
SSR4-204ENST00000370087 FAM13AO94988 1023 aa16.55■□□□□ 0.24
SSR4-204ENST00000370087 SEC24BO95487 1268 aa16.55■□□□□ 0.24
SSR4-204ENST00000370087 USP17L7P0C7H9 530 aa16.55■□□□□ 0.24
SSR4-204ENST00000370087 PTGER3P43115 390 aa16.55■□□□□ 0.24
SSR4-204ENST00000370087 GTF2BQ00403 316 aa16.55■□□□□ 0.24
SSR4-204ENST00000370087 TSPY1Q01534 308 aa16.55■□□□□ 0.24
SSR4-204ENST00000370087 SV2CQ496J9 727 aa16.55■□□□□ 0.24
SSR4-204ENST00000370087 TRIM61Q5EBN2 209 aa16.55■□□□□ 0.24
SSR4-204ENST00000370087 INTS6LQ5JSJ4 861 aaKnown RBP16.55■□□□□ 0.24
SSR4-204ENST00000370087 ADALQ6DHV7 355 aa16.55■□□□□ 0.24
SSR4-204ENST00000370087 C11orf74Q86VG3 221 aa16.55■□□□□ 0.24
SSR4-204ENST00000370087 TMEFF1Q8IYR6 380 aa16.55■□□□□ 0.24
SSR4-204ENST00000370087 CDK5RAP3Q96JB5 506 aa16.55■□□□□ 0.24
SSR4-204ENST00000370087 PARVGQ9HBI0 331 aa16.55■□□□□ 0.24
SSR4-204ENST00000370087 ZDHHC4Q9NPG8 344 aa16.55■□□□□ 0.24
SSR4-204ENST00000370087 DDX43Q9NXZ2 648 aaKnown RBP16.55■□□□□ 0.24
SSR4-204ENST00000370087 EVLQ9UI08 416 aaPredicted RBP16.55■□□□□ 0.24
SSR4-204ENST00000370087 NEUROG3Q9Y4Z2 214 aa16.55■□□□□ 0.24
SSR4-204ENST00000370087 CACNA1EQ15878 2313 aa16.54■□□□□ 0.24
SSR4-204ENST00000370087 TAF4O00268 1085 aa16.54■□□□□ 0.24
SSR4-204ENST00000370087 SCAMP3O14828 347 aaKnown RBP16.54■□□□□ 0.24
SSR4-204ENST00000370087 TRAK2O60296 914 aa16.54■□□□□ 0.24
SSR4-204ENST00000370087 ENGP17813 658 aa16.54■□□□□ 0.24
SSR4-204ENST00000370087 POLR2BP30876 1174 aaKnown RBP16.54■□□□□ 0.24
SSR4-204ENST00000370087 FAM193AP78312 1265 aa16.54■□□□□ 0.24
SSR4-204ENST00000370087 MCM6Q14566 821 aa16.54■□□□□ 0.24
SSR4-204ENST00000370087 CRY1Q16526 586 aa16.54■□□□□ 0.24
SSR4-204ENST00000370087 NFE2Q16621 373 aaPredicted RBP16.54■□□□□ 0.24
SSR4-204ENST00000370087 PIP4P1Q86T03 277 aa16.54■□□□□ 0.24
SSR4-204ENST00000370087 ALLCQ8N6M5 410 aa16.54■□□□□ 0.24
SSR4-204ENST00000370087 EXOC4Q96A65 974 aa16.54■□□□□ 0.24
SSR4-204ENST00000370087 ABCB6Q9NP58 842 aa16.54■□□□□ 0.24
SSR4-204ENST00000370087 UXTQ9UBK9 157 aaPredicted RBP16.54■□□□□ 0.24
SSR4-204ENST00000370087 GTF3C4Q9UKN8 822 aa16.54■□□□□ 0.24
SSR4-204ENST00000370087 AGO2Q9UKV8 859 aaKnown RBP16.54■□□□□ 0.24
SSR4-204ENST00000370087 STYXL1Q9Y6J8 313 aa16.54■□□□□ 0.24
SSR4-204ENST00000370087 PCNX2A6NKB5 2137 aa16.54■□□□□ 0.24
SSR4-204ENST00000370087 CELSR3Q9NYQ7 3312 aa16.53■□□□□ 0.24
SSR4-204ENST00000370087 SGK1O00141 431 aa16.53■□□□□ 0.24
SSR4-204ENST00000370087 CYP17A1P05093 508 aa16.53■□□□□ 0.24
SSR4-204ENST00000370087 TCF3P15923 654 aa16.53■□□□□ 0.24
SSR4-204ENST00000370087 ADSSP30520 456 aa16.53■□□□□ 0.24
SSR4-204ENST00000370087 P2RY2P41231 377 aa16.53■□□□□ 0.24
SSR4-204ENST00000370087 SLC6A11P48066 632 aa16.53■□□□□ 0.24
SSR4-204ENST00000370087 C12orf40Q86WS4 652 aa16.53■□□□□ 0.24
SSR4-204ENST00000370087 CXorf38Q8TB03 319 aa16.53■□□□□ 0.24
SSR4-204ENST00000370087 ZNF560Q96MR9 790 aa16.53■□□□□ 0.24
SSR4-204ENST00000370087 ZHX3Q9H4I2 956 aa16.53■□□□□ 0.24
SSR4-204ENST00000370087 CIZ1Q9ULV3 898 aaPredicted RBP16.53■□□□□ 0.24
SSR4-204ENST00000370087 ARHGAP26Q9UNA1 814 aa16.53■□□□□ 0.24
SSR4-204ENST00000370087 MSRB2Q9Y3D2 182 aa16.53■□□□□ 0.24
SSR4-204ENST00000370087 ANKRD11Q6UB99 2663 aaPredicted RBP16.53■□□□□ 0.24
SSR4-204ENST00000370087 KLF8O95600 359 aaPredicted RBP16.52■□□□□ 0.24
SSR4-204ENST00000370087 CAPNS1P04632 268 aa16.52■□□□□ 0.24
SSR4-204ENST00000370087 ITGB3P05106 788 aa16.52■□□□□ 0.24
SSR4-204ENST00000370087 USP46P62068 366 aa16.52■□□□□ 0.24
SSR4-204ENST00000370087 RPL10AP62906 217 aaKnown RBP16.52■□□□□ 0.24
SSR4-204ENST00000370087 SEMA3BQ13214 749 aa16.52■□□□□ 0.24
SSR4-204ENST00000370087 MAP7D1Q3KQU3 841 aa16.52■□□□□ 0.24
SSR4-204ENST00000370087 EMC10Q5UCC4 262 aa16.52■□□□□ 0.24
SSR4-204ENST00000370087 SCN4BQ8IWT1 228 aa16.52■□□□□ 0.24
SSR4-204ENST00000370087 KCTD17Q8N5Z5 321 aa16.52■□□□□ 0.24
SSR4-204ENST00000370087 C1orf127Q8N9H9 656 aa16.52■□□□□ 0.24
SSR4-204ENST00000370087 IL17RCQ8NAC3 791 aa16.52■□□□□ 0.24
SSR4-204ENST00000370087 TXNDC5Q8NBS9 432 aaKnown RBP16.52■□□□□ 0.24
SSR4-204ENST00000370087 ACBD6Q9BR61 282 aa16.52■□□□□ 0.24
SSR4-204ENST00000370087 AGAP1Q9UPQ3 857 aa16.52■□□□□ 0.24
SSR4-204ENST00000370087 LEFTY2O00292 366 aa16.51■□□□□ 0.23
SSR4-204ENST00000370087 TNFRSF10BO14763 440 aa16.51■□□□□ 0.23
SSR4-204ENST00000370087 ADAM23O75077 832 aa16.51■□□□□ 0.23
SSR4-204ENST00000370087 ATP2C2O75185 946 aa16.51■□□□□ 0.23
SSR4-204ENST00000370087 NFATC1O95644 943 aa16.51■□□□□ 0.23
SSR4-204ENST00000370087 HDCP19113 662 aa16.51■□□□□ 0.23
SSR4-204ENST00000370087 TIE1P35590 1138 aa16.51■□□□□ 0.23
SSR4-204ENST00000370087 SIM1P81133 766 aaPredicted RBP16.51■□□□□ 0.23
SSR4-204ENST00000370087 GRIN1Q05586 938 aa16.51■□□□□ 0.23
SSR4-204ENST00000370087 LMAN2Q12907 356 aa16.51■□□□□ 0.23
SSR4-204ENST00000370087 KCNB1Q14721 858 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms