RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 NBPF12Q5TAG4 269 aaPredicted RBP18.25■□□□□ 0.51
CHTOP-203ENST00000368690 AAGABQ6PD74 315 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 IZUMO2Q6UXV1 221 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 KYAT3Q6YP21 454 aaKnown RBP18.25■□□□□ 0.51
CHTOP-203ENST00000368690 SV2AQ7L0J3 742 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 APOBEC3FQ8IUX4 373 aaKnown RBP18.25■□□□□ 0.51
CHTOP-203ENST00000368690 SCUBE1Q8IWY4 988 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 APOPT1Q96IL0 206 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 CNTN3Q9P232 1028 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 ATXN10Q9UBB4 475 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 PRR12Q9ULL5 1215 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 STRIP2Q9ULQ0 834 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 TMCO1Q9UM00 188 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 PLA2G4CQ9UP65 541 aa18.25■□□□□ 0.51
CHTOP-203ENST00000368690 UBTFL6P0CB48 400 aaPredicted RBP18.24■□□□□ 0.51
CHTOP-203ENST00000368690 ARP10275 920 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 CAP2P40123 477 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 HIRAP54198 1017 aaPredicted RBP18.24■□□□□ 0.51
CHTOP-203ENST00000368690 RPL26P61254 145 aaKnown RBP18.24■□□□□ 0.51
CHTOP-203ENST00000368690 NOP14P78316 857 aaKnown RBP18.24■□□□□ 0.51
CHTOP-203ENST00000368690 C1QBPQ07021 282 aaKnown RBP18.24■□□□□ 0.51
CHTOP-203ENST00000368690 TFDP1Q14186 410 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 HP1BP3Q5SSJ5 553 aaPredicted RBP18.24■□□□□ 0.51
CHTOP-203ENST00000368690 CCDC174Q6PII3 467 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 ACAD11Q709F0 780 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 PHLDB2Q86SQ0 1253 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 PPIL6Q8IXY8 311 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 ST13P4Q8IZP2 240 aaPredicted RBP18.24■□□□□ 0.51
CHTOP-203ENST00000368690 CCDC127Q96BQ5 260 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 FAM161BQ96MY7 647 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 FRMD8P1Q9BZ68 369 aaPredicted RBP18.24■□□□□ 0.51
CHTOP-203ENST00000368690 C1orf21Q9H246 121 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 C1orf112Q9NSG2 853 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 PHF24Q9UPV7 400 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 IQANK1A0A1B0GTG1 560 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 A0A1B0GVG6 124 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 B2RBV5 119 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 IRF6O14896 467 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 LPXNO60711 386 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 PABPC4LP0CB38 370 aaKnown RBP18.24■□□□□ 0.51
CHTOP-203ENST00000368690 CYP24A1Q07973 514 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 DPY19L2Q6NUT2 758 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 CAPN12Q6ZSI9 719 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 MARK2Q7KZI7 788 aaKnown RBP18.24■□□□□ 0.51
CHTOP-203ENST00000368690 TRIM42Q8IWZ5 723 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 PRR11Q96HE9 360 aaPredicted RBP18.24■□□□□ 0.51
CHTOP-203ENST00000368690 TUBGCP5Q96RT8 1024 aa18.24■□□□□ 0.51
CHTOP-203ENST00000368690 CFBP00751 764 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 MT-ND3P03897 115 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 MYL2P10916 166 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 ETS1P14921 441 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 RTP1P59025 263 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 NOMO3P69849 1222 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 XIAPP98170 497 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 SPOCD1Q6ZMY3 1216 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 C3orf62Q6ZUJ4 267 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 MIER3Q7Z3K6 550 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 MAP4K3Q8IVH8 894 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 NME8Q8N427 588 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 FEZF2Q8TBJ5 459 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 ACER1Q8TDN7 264 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 SENP7Q9BQF6 1050 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 NMUR2Q9GZQ4 415 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 EPB41L1Q9H4G0 881 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 CSDE1O75534 798 aaKnown RBP18.23■□□□□ 0.51
CHTOP-203ENST00000368690 ASNSP08243 561 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 CDC16Q13042 620 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 RIPOR1Q6ZS17 1223 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 MRRFQ96E11 262 aaKnown RBP18.23■□□□□ 0.51
CHTOP-203ENST00000368690 C7orf26Q96N11 449 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 PARVAQ9NVD7 372 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 NDUFA13Q9P0J0 144 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 TAGLN3Q9UI15 199 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 TBX20Q9UMR3 447 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 FZD1Q9UP38 647 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 PPME1Q9Y570 386 aa18.23■□□□□ 0.51
CHTOP-203ENST00000368690 SMCHD1A6NHR9 2005 aa18.22■□□□□ 0.51
CHTOP-203ENST00000368690 SLC16A4O15374 487 aa18.22■□□□□ 0.51
CHTOP-203ENST00000368690 TLR3O15455 904 aaKnown RBP18.22■□□□□ 0.51
CHTOP-203ENST00000368690 KRT10P13645 584 aa18.22■□□□□ 0.51
CHTOP-203ENST00000368690 TAL1P17542 331 aaPredicted RBP18.22■□□□□ 0.51
CHTOP-203ENST00000368690 SSTR1P30872 391 aa18.22■□□□□ 0.51
CHTOP-203ENST00000368690 EFTUD2Q15029 972 aaKnown RBP eCLIP18.22■□□□□ 0.511e-8■■■■□ 26.2
CHTOP-203ENST00000368690 MFSD7Q6UXD7 560 aa18.22■□□□□ 0.51
CHTOP-203ENST00000368690 C15orf39Q6ZRI6 1047 aa18.22■□□□□ 0.51
CHTOP-203ENST00000368690 SH2D5Q6ZV89 423 aa18.22■□□□□ 0.51
CHTOP-203ENST00000368690 ANKMY2Q8IV38 441 aa18.22■□□□□ 0.51
CHTOP-203ENST00000368690 NAT8LQ8N9F0 302 aa18.22■□□□□ 0.51
CHTOP-203ENST00000368690 SLC35B2Q8TB61 432 aa18.22■□□□□ 0.51
CHTOP-203ENST00000368690 PANX3Q96QZ0 392 aa18.22■□□□□ 0.51
CHTOP-203ENST00000368690 UBE2OQ9C0C9 1292 aaKnown RBP18.22■□□□□ 0.51
CHTOP-203ENST00000368690 ADARB2Q9NS39 739 aaKnown RBP18.22■□□□□ 0.51
CHTOP-203ENST00000368690 SSX2IPQ9Y2D8 614 aa18.22■□□□□ 0.51
CHTOP-203ENST00000368690 hCG_1818297A0A087WSY0 165 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 KRT1P04264 644 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 DSG3P32926 999 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 MAP3K10Q02779 954 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 TFDP3Q5H9I0 405 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 LLGL2Q6P1M3 1020 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 TTC7BQ86TV6 843 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms