RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 DHX40Q8IX18 779 aaKnown RBP16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 NPAS3Q8IXF0 933 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 SLC2A14Q8TDB8 520 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 FGF13Q92913 245 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 ACSF2Q96CM8 615 aaPredicted RBP16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 KREMEN1Q96MU8 473 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 MED10Q9BTT4 135 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 ZNF638Q14966 1978 aaKnown RBP16.02■□□□□ 0.16
SMPDL3A-201ENST00000368440 F8VP50 259 aa16.02■□□□□ 0.16
SMPDL3A-201ENST00000368440 ACO1P21399 889 aaKnown RBP16.02■□□□□ 0.16
SMPDL3A-201ENST00000368440 TBXAS1P24557 533 aaPredicted RBP16.02■□□□□ 0.16
SMPDL3A-201ENST00000368440 RPL10AP62906 217 aaKnown RBP16.02■□□□□ 0.16
SMPDL3A-201ENST00000368440 VSTM1Q6UX27 236 aa16.02■□□□□ 0.16
SMPDL3A-201ENST00000368440 GBP6Q6ZN66 633 aa16.02■□□□□ 0.16
SMPDL3A-201ENST00000368440 ITIH5Q86UX2 942 aa16.02■□□□□ 0.16
SMPDL3A-201ENST00000368440 RNF135Q8IUD6 432 aa16.02■□□□□ 0.16
SMPDL3A-201ENST00000368440 SHKBP1Q8TBC3 707 aa16.02■□□□□ 0.16
SMPDL3A-201ENST00000368440 BPIFA3Q9BQP9 254 aa16.02■□□□□ 0.16
SMPDL3A-201ENST00000368440 VPS16Q9H269 839 aa16.02■□□□□ 0.16
SMPDL3A-201ENST00000368440 IL21Q9HBE4 155 aa16.02■□□□□ 0.16
SMPDL3A-201ENST00000368440 BDP1A6H8Y1 2624 aa16.02■□□□□ 0.15
SMPDL3A-201ENST00000368440 A0A1W2PRU2 124 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 SLC38A8A6NNN8 435 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 PES1O00541 588 aaKnown RBP16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 ZNF18P17022 549 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 PON1P27169 355 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 ADORA2BP29275 332 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 EXOC3L4Q17RC7 722 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 CYP4A22Q5TCH4 519 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 GAREM2Q75VX8 874 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 ZDHHC14Q8IZN3 488 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 MCRS1Q96EZ8 462 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 TMEM176AQ96HP8 235 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 KCNK16Q96T55 309 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 NAT10Q9H0A0 1025 aaKnown RBP16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 SIX2Q9NPC8 291 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 KRT82Q9NSB4 513 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 LIMD1Q9UGP4 676 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 AJAP1Q9UKB5 411 aaPredicted RBP16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 CDH7Q9ULB5 785 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 MAGED2Q9UNF1 606 aaPredicted RBP16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 GTPBP10A4D1E9 387 aaKnown RBP16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 BEST1O76090 585 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 ASGR2P07307 311 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 LAMP2P13473 410 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 ATP1A3P13637 1013 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 GABRR2P28476 465 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 ZNF165P49910 485 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 GCNT1Q02742 428 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 KCNMA1Q12791 1236 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 TEAD2Q15562 447 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 STXBP5Q5T5C0 1151 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 PPP1R26Q5T8A7 1209 aaPredicted RBP16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 CYFIP2Q96F07 1278 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 SMOQ99835 787 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 EPS15L1Q9UBC2 864 aa16.01■□□□□ 0.15
SMPDL3A-201ENST00000368440 RNF225M0QZC1 329 aaPredicted RBP16■□□□□ 0.15
SMPDL3A-201ENST00000368440 AP1G2O75843 785 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 NOL4O94818 638 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 CALCAP01258 141 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 CSH1P0DML2 217 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 CSH2P0DML3 217 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 USP46P62068 366 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 IQCB1Q15051 598 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 TAF12Q16514 161 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 DPY19L2P1Q6NXN4 242 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 TMEM150AQ86TG1 271 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 TTC39CQ8N584 583 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 LEMD2Q8NC56 503 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 ZMIZ2Q8NF64 920 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 RSAD2Q8WXG1 361 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 SMARCD1Q96GM5 515 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 C8orf48Q96LL4 319 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 HEXIM2Q96MH2 286 aaKnown RBP16■□□□□ 0.15
SMPDL3A-201ENST00000368440 HNRNPABQ99729 332 aaKnown RBP16■□□□□ 0.15
SMPDL3A-201ENST00000368440 FAM124BQ9H5Z6 455 aaPredicted RBP16■□□□□ 0.15
SMPDL3A-201ENST00000368440 UBE2TQ9NPD8 197 aaPredicted RBP16■□□□□ 0.15
SMPDL3A-201ENST00000368440 MUTYHQ9UIF7 546 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 PCDHB4Q9Y5E5 795 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 MYO16Q9Y6X6 1858 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 ATP8B3O60423 1300 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 TTC28Q96AY4 2481 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 ANAPC1Q9H1A4 1944 aa16■□□□□ 0.15
SMPDL3A-201ENST00000368440 NUP210Q8TEM1 1887 aaPredicted RBP15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 TNFRSF10AO00220 468 aa15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 ZNF197O14709 1029 aa15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 TRIM66O15016 1216 aa15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 TADA3O75528 432 aa15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 ANXA13P27216 316 aa15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 YWHAEP62258 255 aaKnown RBP15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 CYP4F8P98187 520 aa15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 TMEM270Q6UE05 265 aa15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 APTXQ7Z2E3 356 aaKnown RBP15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 PLCD3Q8N3E9 789 aa15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 SPATA17Q96L03 361 aa15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 ZSWIM3Q96MP5 696 aa15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 APEX2Q9UBZ4 518 aa15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 LIMA1Q9UHB6 759 aaKnown RBP15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 MYO10Q9HD67 2058 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms