RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 RAB6CQ9H0N0 254 aa19■□□□□ 0.63
UBQLN4-201ENST00000368309 RBPJLQ9UBG7 517 aa19■□□□□ 0.63
UBQLN4-201ENST00000368309 SIP14410 1827 aa19■□□□□ 0.63
UBQLN4-201ENST00000368309 MIPP30301 263 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 RIBC1Q8N443 379 aaPredicted RBP18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 PYROXD1Q8WU10 500 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 HEXIM2Q96MH2 286 aaKnown RBP18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 GRID1Q9ULK0 1009 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 SHOC2Q9UQ13 582 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 MGRN1O60291 552 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 ASMTLO95671 621 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 NCALDP61601 193 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 PTPN11Q06124 597 aaPredicted RBP18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 KCTD2Q14681 263 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 CCDC142Q17RM4 750 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 SMC6Q96SB8 1091 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 KLHL14Q9P2G3 628 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 PRKAG3Q9UGI9 489 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 M0QYV0 167 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 MICAL2O94851 1124 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 CA4P22748 312 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 MMRN1Q13201 1228 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 E2F5Q15329 346 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 MTFR1Q15390 333 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 SMARCAD1Q9H4L7 1026 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 TRIM33Q9UPN9 1127 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 FARP1Q9Y4F1 1045 aaPredicted RBP18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 CLUHO75153 1309 aa18.99■□□□□ 0.63
UBQLN4-201ENST00000368309 A0A087WZ62 844 aa18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 C3orf62Q6ZUJ4 267 aa18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 BBS12Q6ZW61 710 aa18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 FDXACB1Q9BRP7 624 aaPredicted RBP18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 BCO2Q9BYV7 579 aa18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 IFT122Q9HBG6 1241 aa18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 TNFSF13BQ9Y275 285 aa18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 GRAP2O75791 330 aa18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 RDXP35241 583 aaKnown RBP18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 SLC1A5Q15758 541 aa18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 GALNTL6Q49A17 601 aa18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 CCDC62Q6P9F0 684 aa18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 NPNTQ6UXI9 565 aa18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 TMEM176AQ96HP8 235 aa18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 MMP19Q99542 508 aa18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 MAK16Q9BXY0 300 aaKnown RBP18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 BBS9Q3SYG4 887 aa18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 FAM102AQ5T9C2 384 aaPredicted RBP18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 ZC3H18Q86VM9 953 aaKnown RBP18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 PPIL6Q8IXY8 311 aa18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 DENND1AQ8TEH3 1009 aa18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 PPME1Q9Y570 386 aa18.98■□□□□ 0.63
UBQLN4-201ENST00000368309 A0A0G2JLL6 359 aaPredicted RBP18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 HBP1O60381 514 aa18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 MAP1SQ66K74 1059 aaPredicted RBP18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 PRRT2Q7Z6L0 340 aaPredicted RBP18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 ECHDC2Q86YB7 292 aa18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 TDRPQ86YL5 185 aa18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 SULF1Q8IWU6 871 aa18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 TBC1D31Q96DN5 1066 aa18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 USP18Q9UMW8 372 aa18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 RNF8O76064 485 aa18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 INSRRP14616 1297 aa18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 KRT4P19013 534 aa18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 EIF3EP60228 445 aaKnown RBP18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 BASP1P80723 227 aaKnown RBP18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 BNIP1Q12981 228 aa18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 MKRN3Q13064 507 aaKnown RBP18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 NR1H3Q13133 447 aa18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 CDO1Q16878 200 aa18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 EXOC8Q8IYI6 725 aa18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 MPHOSPH6Q99547 160 aaKnown RBP18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 WDR83Q9BRX9 315 aaKnown RBP18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 RABGEF1Q9UJ41 708 aa18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 IGF2BP3O00425 579 aaKnown RBP eCLIP18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 VTNP04004 478 aa18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 R3HDM1Q15032 1099 aaKnown RBP18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 FBXO36Q8NEA4 188 aa18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 KLHL29Q96CT2 875 aa18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 PIWIL1Q96J94 861 aaKnown RBP18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 KLF6Q99612 283 aaPredicted RBP18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 ADPGKQ9BRR6 497 aa18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 C12orf65Q9H3J6 166 aaKnown RBP18.97■□□□□ 0.63
UBQLN4-201ENST00000368309 GOLGA8RI6L899 631 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 CILPO75339 1184 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 TMEM63AO94886 807 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 IL18RAPO95256 599 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 ATP6V1G2O95670 118 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 RBP3P10745 1247 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 ARL4CP56559 192 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 SPARCL1Q14515 664 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 NAT8LQ8N9F0 302 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 SPATA18Q8TC71 538 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 FNIP1Q8TF40 1166 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 DCPSQ96C86 337 aaKnown RBP18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 RXFP1Q9HBX9 757 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 PHTF1Q9UMS5 762 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 GPD2P43304 727 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 TTLL12Q14166 644 aaPredicted RBP18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 ZNF268Q14587 947 aaPredicted RBP18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 C15orf59Q2T9L4 293 aaPredicted RBP18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 TTC13Q8NBP0 860 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms