RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 SLFN11Q7Z7L1 901 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 PRMT1Q99873 361 aaKnown RBP19.34■□□□□ 0.69
CLIP2-202ENST00000361545 CNTNAP2Q9UHC6 1331 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 CYTH3O43739 400 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 RRM1P23921 792 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 AARSP49588 968 aaKnown RBP eCLIP19.34■□□□□ 0.69
CLIP2-202ENST00000361545 CENPCQ03188 943 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 RABGAP1LQ5R372 815 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 TAF2Q6P1X5 1199 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 DENND5BQ6ZUT9 1274 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 SLC5A5Q92911 643 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 TKTL1P51854 596 aa19.33■□□□□ 0.69
CLIP2-202ENST00000361545 PRAMEF19Q5SWL8 479 aa19.33■□□□□ 0.69
CLIP2-202ENST00000361545 ATG4AQ8WYN0 398 aa19.33■□□□□ 0.69
CLIP2-202ENST00000361545 PGLYRP2Q96PD5 576 aa19.33■□□□□ 0.69
CLIP2-202ENST00000361545 PACSIN1Q9BY11 444 aa19.33■□□□□ 0.69
CLIP2-202ENST00000361545 KDM4CQ9H3R0 1056 aa19.33■□□□□ 0.69
CLIP2-202ENST00000361545 EML1O00423 815 aa19.33■□□□□ 0.69
CLIP2-202ENST00000361545 PYGLP06737 847 aa19.33■□□□□ 0.69
CLIP2-202ENST00000361545 SLC27A1Q6PCB7 646 aa19.33■□□□□ 0.69
CLIP2-202ENST00000361545 SH2D3CQ8N5H7 860 aa19.33■□□□□ 0.69
CLIP2-202ENST00000361545 SLC20A1Q8WUM9 679 aa19.33■□□□□ 0.69
CLIP2-202ENST00000361545 TATDN2Q93075 761 aa19.33■□□□□ 0.69
CLIP2-202ENST00000361545 FAM161BQ96MY7 647 aa19.33■□□□□ 0.69
CLIP2-202ENST00000361545 ZSWIM1Q9BR11 485 aa19.33■□□□□ 0.69
CLIP2-202ENST00000361545 TRIM45Q9H8W5 580 aaPredicted RBP19.33■□□□□ 0.69
CLIP2-202ENST00000361545 TCP11X1B4DZS4 312 aa19.33■□□□□ 0.68
CLIP2-202ENST00000361545 F9P00740 461 aa19.33■□□□□ 0.68
CLIP2-202ENST00000361545 MCF2P10911 925 aa19.33■□□□□ 0.68
CLIP2-202ENST00000361545 COILP38432 576 aaPredicted RBP19.33■□□□□ 0.68
CLIP2-202ENST00000361545 RGS4P49798 205 aa19.33■□□□□ 0.68
CLIP2-202ENST00000361545 ALDH18A1P54886 795 aaKnown RBP19.33■□□□□ 0.68
CLIP2-202ENST00000361545 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.33■□□□□ 0.68
CLIP2-202ENST00000361545 SLC13A5Q86YT5 568 aaPredicted RBP19.33■□□□□ 0.68
CLIP2-202ENST00000361545 SNX31Q8N9S9 440 aa19.33■□□□□ 0.68
CLIP2-202ENST00000361545 ASPSCR1Q9BZE9 553 aa19.33■□□□□ 0.68
CLIP2-202ENST00000361545 OLFML3Q9NRN5 406 aa19.33■□□□□ 0.68
CLIP2-202ENST00000361545 KRT4P19013 534 aa19.33■□□□□ 0.68
CLIP2-202ENST00000361545 SERPINB9P50453 376 aa19.33■□□□□ 0.68
CLIP2-202ENST00000361545 AP1ARQ63HQ0 302 aa19.33■□□□□ 0.68
CLIP2-202ENST00000361545 CATSPERGQ6ZRH7 1159 aa19.33■□□□□ 0.68
CLIP2-202ENST00000361545 TRPM4Q8TD43 1214 aa19.33■□□□□ 0.68
CLIP2-202ENST00000361545 COPS5Q92905 334 aa19.33■□□□□ 0.68
CLIP2-202ENST00000361545 ANXA9O76027 345 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 HSP90AA5PQ58FG0 334 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 FAM171A1Q5VUB5 890 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 CENPPQ6IPU0 288 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 RGS9BPQ6ZS82 235 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 SYT15Q9BQS2 421 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.32■□□□□ 0.68
CLIP2-202ENST00000361545 CUL3Q13618 768 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 ANKS3Q6ZW76 656 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 CXorf38Q8TB03 319 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 CHST12Q9NRB3 414 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 SLC39A10Q9ULF5 831 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 FAM47DPA6NHR8 397 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 RHOBTB1O94844 696 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 NFE2Q16621 373 aaPredicted RBP19.32■□□□□ 0.68
CLIP2-202ENST00000361545 C6orf10Q5SRN2 563 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 RFX8Q6ZV50 586 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 ERP44Q9BS26 406 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 KANSL3Q9P2N6 904 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 VPS28Q9UK41 221 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 GAKO14976 1311 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 SPDYE5A6NIY4 337 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 MEFVO15553 781 aaPredicted RBP19.32■□□□□ 0.68
CLIP2-202ENST00000361545 SPDYE7PQ495Y7 208 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 PPIL6Q8IXY8 311 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 PNMA5Q96PV4 448 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 PURBQ96QR8 312 aaKnown RBP19.32■□□□□ 0.68
CLIP2-202ENST00000361545 RANBP17Q9H2T7 1088 aaKnown RBP19.32■□□□□ 0.68
CLIP2-202ENST00000361545 RNF19AQ9NV58 838 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 ITGA11Q9UKX5 1188 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 ARHGAP23Q9P227 1491 aa19.32■□□□□ 0.68
CLIP2-202ENST00000361545 RNF103-CHMP3A0A140T963 221 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 AGTP01019 485 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 LGALS2P05162 132 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 PYGBP11216 843 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 CXCL17Q6UXB2 119 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 EDEM1Q92611 657 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 CIPCQ9C0C6 399 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 SENP6Q9GZR1 1112 aaPredicted RBP19.31■□□□□ 0.68
CLIP2-202ENST00000361545 ETNK1Q9HBU6 452 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.31■□□□□ 0.68
CLIP2-202ENST00000361545 SLC25A13Q9UJS0 675 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.31■□□□□ 0.68
CLIP2-202ENST00000361545 TM4SF1P30408 202 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 RAB27AP51159 221 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 CCDC15Q0P6D6 951 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 ELAVL2Q12926 359 aaKnown RBP19.31■□□□□ 0.68
CLIP2-202ENST00000361545 ZC3H15Q8WU90 426 aaKnown RBP19.31■□□□□ 0.68
CLIP2-202ENST00000361545 UCMAQ8WVF2 138 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 AGXT2Q9BYV1 514 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 WWP1Q9H0M0 922 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 GGT7Q9UJ14 662 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 DUSP10Q9Y6W6 482 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 CARSP49589 748 aaKnown RBP19.31■□□□□ 0.68
CLIP2-202ENST00000361545 CTCFP49711 727 aaPredicted RBP19.31■□□□□ 0.68
CLIP2-202ENST00000361545 STX3Q13277 289 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 MROH9Q5TGP6 573 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms