RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CENPFP49454 3210 aa23.78■■□□□ 1.4
LDB1-201ENST00000361198 CCT8L1PA6NM43 557 aa23.77■■□□□ 1.4
LDB1-201ENST00000361198 GPR32O75388 356 aa23.77■■□□□ 1.4
LDB1-201ENST00000361198 KLRC2P26717 231 aa23.77■■□□□ 1.4
LDB1-201ENST00000361198 IL1R2P27930 398 aa23.77■■□□□ 1.4
LDB1-201ENST00000361198 SLC25A11Q02978 314 aaKnown RBP23.77■■□□□ 1.4
LDB1-201ENST00000361198 SMTNL2Q2TAL5 461 aa23.77■■□□□ 1.4
LDB1-201ENST00000361198 GSTA5Q7RTV2 222 aa23.77■■□□□ 1.4
LDB1-201ENST00000361198 LRRC34Q8IZ02 419 aa23.77■■□□□ 1.4
LDB1-201ENST00000361198 ANKS4BQ8N8V4 417 aa23.77■■□□□ 1.4
LDB1-201ENST00000361198 UBA3Q8TBC4 463 aa23.77■■□□□ 1.4
LDB1-201ENST00000361198 FNIP1Q8TF40 1166 aa23.77■■□□□ 1.4
LDB1-201ENST00000361198 PWWP2AQ96N64 755 aa23.77■■□□□ 1.4
LDB1-201ENST00000361198 PRMT1Q99873 361 aaKnown RBP23.77■■□□□ 1.4
LDB1-201ENST00000361198 STAU1O95793 577 aaKnown RBP23.77■■□□□ 1.4
LDB1-201ENST00000361198 HMGCRP04035 888 aa23.77■■□□□ 1.4
LDB1-201ENST00000361198 SMIM10L2AP0DMW4 78 aa23.77■■□□□ 1.4
LDB1-201ENST00000361198 SMIM10L2BP0DMW5 78 aa23.77■■□□□ 1.4
LDB1-201ENST00000361198 ZNF268Q14587 947 aaPredicted RBP23.77■■□□□ 1.4
LDB1-201ENST00000361198 DCAF4L1Q3SXM0 396 aa23.77■■□□□ 1.4
LDB1-201ENST00000361198 POLNQ7Z5Q5 900 aa23.77■■□□□ 1.4
LDB1-201ENST00000361198 GLIS1Q8NBF1 620 aa23.77■■□□□ 1.4
LDB1-201ENST00000361198 LENG1Q96BZ8 264 aaPredicted RBP23.77■■□□□ 1.4
LDB1-201ENST00000361198 ZMAT2Q96NC0 199 aaKnown RBP23.77■■□□□ 1.4
LDB1-201ENST00000361198 EIF2AQ9BY44 585 aaKnown RBP23.77■■□□□ 1.4
LDB1-201ENST00000361198 ZWILCHQ9H900 591 aa23.77■■□□□ 1.4
LDB1-201ENST00000361198 GNEQ9Y223 722 aaKnown RBP23.77■■□□□ 1.4
LDB1-201ENST00000361198 PTPN7P35236 360 aa23.76■■□□□ 1.39
LDB1-201ENST00000361198 CAV1Q03135 178 aa23.76■■□□□ 1.39
LDB1-201ENST00000361198 XRCC4Q13426 336 aa23.76■■□□□ 1.39
LDB1-201ENST00000361198 KCNT1Q5JUK3 1230 aa23.76■■□□□ 1.39
LDB1-201ENST00000361198 CATSPER4Q7RTX7 472 aa23.76■■□□□ 1.39
LDB1-201ENST00000361198 HAUS1Q96CS2 278 aa23.76■■□□□ 1.39
LDB1-201ENST00000361198 OSMRQ99650 979 aa23.76■■□□□ 1.39
LDB1-201ENST00000361198 GCOM2Q9BZD3 368 aaPredicted RBP23.76■■□□□ 1.39
LDB1-201ENST00000361198 SLC5A4Q9NY91 659 aa23.76■■□□□ 1.39
LDB1-201ENST00000361198 HES2Q9Y543 173 aa23.76■■□□□ 1.39
LDB1-201ENST00000361198 C3orf70A6NLC5 250 aaPredicted RBP23.76■■□□□ 1.39
LDB1-201ENST00000361198 ACSL3O95573 720 aa23.76■■□□□ 1.39
LDB1-201ENST00000361198 F2P00734 622 aa23.76■■□□□ 1.39
LDB1-201ENST00000361198 CYP3A5P20815 502 aa23.76■■□□□ 1.39
LDB1-201ENST00000361198 GABRB2P47870 512 aa23.76■■□□□ 1.39
LDB1-201ENST00000361198 DRICH1Q6PGQ1 229 aaPredicted RBP23.76■■□□□ 1.39
LDB1-201ENST00000361198 FUKQ8N0W3 1084 aa23.76■■□□□ 1.39
LDB1-201ENST00000361198 MCRS1Q96EZ8 462 aa23.76■■□□□ 1.39
LDB1-201ENST00000361198 FLRT1Q9NZU1 646 aa23.76■■□□□ 1.39
LDB1-201ENST00000361198 ZNF148Q9UQR1 794 aa23.76■■□□□ 1.39
LDB1-201ENST00000361198 NRCAMQ92823 1304 aa23.76■■□□□ 1.39
LDB1-201ENST00000361198 DNAJC8O75937 253 aaPredicted RBP23.75■■□□□ 1.39
LDB1-201ENST00000361198 TTC4O95801 387 aa23.75■■□□□ 1.39
LDB1-201ENST00000361198 SLC27A1Q6PCB7 646 aa23.75■■□□□ 1.39
LDB1-201ENST00000361198 PPEF2O14830 753 aa23.75■■□□□ 1.39
LDB1-201ENST00000361198 LMNB2Q03252 620 aa23.75■■□□□ 1.39
LDB1-201ENST00000361198 HIC1Q14526 733 aa23.75■■□□□ 1.39
LDB1-201ENST00000361198 LONRF1Q17RB8 773 aa23.75■■□□□ 1.39
LDB1-201ENST00000361198 MORN1Q5T089 497 aa23.75■■□□□ 1.39
LDB1-201ENST00000361198 IZUMO3Q5VZ72 239 aa23.75■■□□□ 1.39
LDB1-201ENST00000361198 C12orf29Q8N999 325 aa23.75■■□□□ 1.39
LDB1-201ENST00000361198 TSPAN16Q9UKR8 245 aa23.75■■□□□ 1.39
LDB1-201ENST00000361198 TCEA3O75764 348 aa23.74■■□□□ 1.39
LDB1-201ENST00000361198 P3H1Q32P28 736 aa23.74■■□□□ 1.39
LDB1-201ENST00000361198 OLFML2BQ68BL8 750 aa23.74■■□□□ 1.39
LDB1-201ENST00000361198 NT5C1AQ9BXI3 368 aa23.74■■□□□ 1.39
LDB1-201ENST00000361198 PLEKHA5Q9HAU0 1116 aa23.74■■□□□ 1.39
LDB1-201ENST00000361198 RRAGCQ9HB90 399 aa23.74■■□□□ 1.39
LDB1-201ENST00000361198 ZSCAN5DPP0CG00 497 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 CYP2C9P11712 490 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 PSMC4P43686 418 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 MYO1EQ12965 1108 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 MAP2K5Q13163 448 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 TLK2Q86UE8 772 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 BBOF1Q8ND07 529 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 SGSM3Q96HU1 749 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 SNX27Q96L92 541 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 RNF19AQ9NV58 838 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 SAMD15Q9P1V8 674 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 TRIP12Q14669 1992 aaPredicted RBP23.73■■□□□ 1.39
LDB1-201ENST00000361198 MBLAC1A4D2B0 266 aaPredicted RBP23.73■■□□□ 1.39
LDB1-201ENST00000361198 PIK3R2O00459 728 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 KRT7P08729 469 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 OASLQ15646 514 aaKnown RBP23.73■■□□□ 1.39
LDB1-201ENST00000361198 KYNUQ16719 465 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 HADHQ16836 314 aaKnown RBP23.73■■□□□ 1.39
LDB1-201ENST00000361198 FAM102AQ5T9C2 384 aaPredicted RBP23.73■■□□□ 1.39
LDB1-201ENST00000361198 CYB5D1Q6P9G0 228 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 LCLAT1Q6UWP7 414 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 ALLCQ8N6M5 410 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 IPO4Q8TEX9 1081 aaKnown RBP23.73■■□□□ 1.39
LDB1-201ENST00000361198 ARHGEF2Q92974 986 aaKnown RBP23.73■■□□□ 1.39
LDB1-201ENST00000361198 TUBGCP4Q9UGJ1 667 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 PCSK1NQ9UHG2 260 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 SNX9Q9Y5X1 595 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 ZNF236Q9UL36 1845 aa23.73■■□□□ 1.39
LDB1-201ENST00000361198 SMIM35A0A1B0GVV1 85 aa23.72■■□□□ 1.39
LDB1-201ENST00000361198 CHUKO15111 745 aa23.72■■□□□ 1.39
LDB1-201ENST00000361198 GSTA1P08263 222 aa23.72■■□□□ 1.39
LDB1-201ENST00000361198 ETS1P14921 441 aa23.72■■□□□ 1.39
LDB1-201ENST00000361198 ATP5DP30049 168 aa23.72■■□□□ 1.39
LDB1-201ENST00000361198 CCDC38Q502W7 563 aa23.72■■□□□ 1.39
LDB1-201ENST00000361198 GLRA4Q5JXX5 417 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms