RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 PTPROQ16827 1216 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 NAA35Q5VZE5 725 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 SLC24A5Q71RS6 500 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 C3orf58Q8NDZ4 430 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 TRIM11Q96F44 468 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 ELOVL4Q9GZR5 314 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 THAP2Q9H0W7 228 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 TBX21Q9UL17 535 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 FAM187AA6NFU0 413 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 TTI1O43156 1089 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 HCRTO43612 131 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 B4GALT3O60512 393 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 BRD2P25440 801 aaKnown RBP13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 RAD23BP54727 409 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 FAM189BP81408 668 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 ZNF844Q08AG5 666 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 INCA1Q0VD86 236 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 UAP1Q16222 522 aaPredicted RBP13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 CLLU1OSQ5K130 101 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 ANKLE1Q8NAG6 615 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 TMEM176AQ96HP8 235 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 CCT8L2Q96SF2 557 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 MRPL45Q9BRJ2 306 aaKnown RBP13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 C11orf49Q9H6J7 331 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 INPP5FQ9Y2H2 1132 aa13.89□□□□□ -0.19
SQSTM1-201ENST00000360718 LAMA2P24043 3122 aaKnown RBP13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 DDX3YO15523 660 aaKnown RBP13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 PARNO95453 639 aaKnown RBP13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 FGFR1P11362 822 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 UNGP13051 313 aaPredicted RBP13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 ITGB8P26012 769 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 HPDP32754 393 aaPredicted RBP13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 CLCNKBP51801 687 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 HADHBP55084 474 aaKnown RBP13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 SOWAHAQ2M3V2 549 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 TMC3Q7Z5M5 1100 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 PASD1Q8IV76 773 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 SLC4A11Q8NBS3 891 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 CYFIP2Q96F07 1278 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 NT5C1AQ9BXI3 368 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 OSGEPQ9NPF4 335 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 GDAP2Q9NXN4 497 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 BCCIPQ9P287 314 aaKnown RBP eCLIP13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 RASAL2Q9UJF2 1139 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 KIAA1257Q9ULG3 409 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 TTC3P53804 2025 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 CASTOR2A6NHX0 329 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 MIF4GDA9UHW6 222 aaKnown RBP13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 E7EVH7 732 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 ENPP3O14638 875 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 HUS1O60921 280 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 LSM8O95777 96 aaKnown RBP13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 CYP1A1P04798 512 aaPredicted RBP13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 RPL9P32969 192 aaKnown RBP13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 NDST1P52848 882 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 LILRA4P59901 499 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 CENPCQ03188 943 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 DHX9Q08211 1270 aaKnown RBP13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 DHX34Q14147 1143 aaKnown RBP13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 TMEM35BQ8NCS4 154 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 APPL2Q8NEU8 664 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 MYCBPAPQ8TBZ2 947 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 CPA5Q8WXQ8 436 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 SEPT8Q92599 483 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 ZNF653Q96CK0 615 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 ARHGEF26Q96DR7 871 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 HEXIM2Q96MH2 286 aaKnown RBP13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 NEUROG2Q9H2A3 272 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 CTTNBP2NLQ9P2B4 639 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 PCDHGC3Q9UN70 934 aa13.88□□□□□ -0.19
SQSTM1-201ENST00000360718 GMNCA6NCL1 334 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 MYBL1P10243 752 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 VDRP11473 427 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 GBP1P32455 592 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 PPP2R2AP63151 447 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 DR1Q01658 176 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 IFFO1Q0D2I5 559 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 GRIK3Q13003 919 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 GLB1LQ6UWU2 654 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 DEFB128Q7Z7B8 93 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 UBL4BQ8N7F7 174 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 KBTBD7Q8WVZ9 684 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 APBB2Q92870 758 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 FMO2Q99518 471 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 ZNF518BQ9C0D4 1074 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 MCOLN1Q9GZU1 580 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 CHORDC1Q9UHD1 332 aaPredicted RBP13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 GTF3C4Q9UKN8 822 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 MICAL3Q7RTP6 2002 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 F8W810 466 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 MYO1FO00160 1098 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 CXCL10P02778 98 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 NOMO3P69849 1222 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 TCEAL1Q15170 157 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 SGO2Q562F6 1265 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 LIN9Q5TKA1 542 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 MMS22LQ6ZRQ5 1243 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 DPH6Q7L8W6 267 aa13.87□□□□□ -0.19
SQSTM1-201ENST00000360718 UNC93AQ86WB7 457 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms