RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 KIAA0907Q7Z7F0 614 aaPredicted RBP6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 TMEM86AQ8N2M4 240 aa6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 OR10T2Q8NGX3 314 aa6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 PIBF1Q8WXW3 757 aa6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 ZFRQ96KR1 1074 aaKnown RBP6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 CCL26Q9Y258 94 aa6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 ZNF106Q9H2Y7 1883 aaKnown RBP6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 MYO18BQ8IUG5 2567 aa6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 CHMP2AO43633 222 aa6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 GRIA4P48058 902 aa6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 GRIK2Q13002 908 aa6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 INAVAQ3KP66 663 aa6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 BMP2KLQ5H9B9 411 aa6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 FAM217AQ8IXS0 508 aa6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 IGSF8Q969P0 613 aa6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 USP29Q9HBJ7 922 aa6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 STARD5Q9NSY2 213 aa6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 DUS2Q9NX74 493 aaKnown RBP6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 WSB2Q9NYS7 404 aaPredicted RBP6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 RGL1Q9NZL6 768 aa6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 TBC1D14Q9P2M4 693 aa6.48□□□□□ -1.37
CDC42SE2-201ENST00000360515 WDFY3Q8IZQ1 3526 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 ASPMQ8IZT6 3477 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 TRAV19A0A0A6YYK7 116 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 METTL12A8MUP2 240 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 STAU1O95793 577 aaKnown RBP6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 NFICP08651 508 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 ACP1P24666 158 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 PTGER3P43115 390 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 RXRGP48443 463 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 LILRA4P59901 499 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 RPL10AP62906 217 aaKnown RBP6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 NFE2Q16621 373 aaPredicted RBP6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 DPH6Q7L8W6 267 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 CATSPER3Q86XQ3 398 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 SRRTQ9BXP5 876 aaKnown RBP6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 ATXN3LQ9H3M9 355 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 ZSWIM6Q9HCJ5 1215 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 POLIQ9UNA4 740 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 HELZ2Q9BYK8 2649 aaKnown RBP6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 SH3BP5O60239 455 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 CACNG3O60359 315 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 ACO1P21399 889 aaKnown RBP6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 ITPKAP23677 461 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 MARCKSP29966 332 aaPredicted RBP6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 VASPP50552 380 aaPredicted RBP6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 ZNF131P52739 623 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 DUSP4Q13115 394 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 GLYCTKQ8IVS8 523 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 DCP1BQ8IZD4 617 aaKnown RBP6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 C4orf32Q8N8J7 132 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 HASPINQ8TF76 798 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 TMEM174Q8WUU8 243 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 UBE2Q2Q8WVN8 375 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 C8orf48Q96LL4 319 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 STRA6Q9BX79 667 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 CPSF3Q9UKF6 684 aaKnown RBP6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 PI4KAP42356 2102 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 CFAP46Q8IYW2 2715 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 TRABD2BA6NFA1 517 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 SGK1O00141 431 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 CISD3P0C7P0 127 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 CTSKP43235 329 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 SUZ12Q15022 739 aaKnown RBP6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 C9orf57Q5W0N0 161 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 OVOS1Q6IE37 1185 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 VSTM1Q6UX27 236 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 NOSTRINQ8IVI9 506 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 TMEM176AQ96HP8 235 aa6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 TPRP12270 2363 aaKnown RBP6.47□□□□□ -1.37
CDC42SE2-201ENST00000360515 ZBTB39O15060 712 aa6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 ITGB2P05107 769 aa6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 GP1BBP13224 206 aa6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 PNPLA4P41247 253 aa6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 GRK6P43250 576 aa6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 TRAPPC10P48553 1259 aa6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 KCNC4Q03721 635 aa6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 ZNF33AQ06730 810 aa6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 TOB2Q14106 344 aaPredicted RBP6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 SYCP2LQ5T4T6 812 aa6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 TICAM1Q8IUC6 712 aa6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 RASEFQ8IZ41 740 aa6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 LRRC52Q8N7C0 313 aa6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 IGSF22Q8N9C0 903 aa6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 PIGKQ92643 395 aa6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 HVCN1Q96D96 273 aa6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 ZFYVE19Q96K21 471 aa6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 YTHDC1Q96MU7 727 aaKnown RBP6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 HAPLN2Q9GZV7 340 aa6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 EBF3Q9H4W6 596 aa6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 ORC3Q9UBD5 711 aaPredicted RBP6.46□□□□□ -1.37
CDC42SE2-201ENST00000360515 APODP05090 189 aa6.46□□□□□ -1.38
CDC42SE2-201ENST00000360515 GNSP15586 552 aa6.46□□□□□ -1.38
CDC42SE2-201ENST00000360515 ACTN2P35609 894 aa6.46□□□□□ -1.38
CDC42SE2-201ENST00000360515 ACADVLP49748 655 aa6.46□□□□□ -1.38
CDC42SE2-201ENST00000360515 PSEN1P49768 467 aa6.46□□□□□ -1.38
CDC42SE2-201ENST00000360515 CTTNQ14247 550 aaKnown RBP6.46□□□□□ -1.38
CDC42SE2-201ENST00000360515 ADCK5Q3MIX3 580 aa6.46□□□□□ -1.38
CDC42SE2-201ENST00000360515 EMC10Q5UCC4 262 aa6.46□□□□□ -1.38
CDC42SE2-201ENST00000360515 KLHDC10Q6PID8 442 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms