RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 SLC11A1P49279 550 aa24.45■■□□□ 1.5
SDF4-202ENST00000360001 PLCB3Q01970 1234 aa24.45■■□□□ 1.5
SDF4-202ENST00000360001 ZNF252P-AS1Q0IIN9 211 aa24.45■■□□□ 1.5
SDF4-202ENST00000360001 NAA30Q147X3 362 aaPredicted RBP24.45■■□□□ 1.5
SDF4-202ENST00000360001 DCUN1D2Q6PH85 259 aa24.45■■□□□ 1.5
SDF4-202ENST00000360001 ALG3Q92685 438 aa24.45■■□□□ 1.5
SDF4-202ENST00000360001 DUSP16Q9BY84 665 aa24.45■■□□□ 1.5
SDF4-202ENST00000360001 MIS12Q9H081 205 aa24.45■■□□□ 1.5
SDF4-202ENST00000360001 SMARCAL1Q9NZC9 954 aa24.45■■□□□ 1.5
SDF4-202ENST00000360001 PCDH10Q9P2E7 1040 aa24.45■■□□□ 1.5
SDF4-202ENST00000360001 CTAGE15A4D2H0 777 aa24.44■■□□□ 1.5
SDF4-202ENST00000360001 EFCAB8A8MWE9 144 aa24.44■■□□□ 1.5
SDF4-202ENST00000360001 TADA2AO75478 443 aa24.44■■□□□ 1.5
SDF4-202ENST00000360001 CTAGE8P0CG41 777 aa24.44■■□□□ 1.5
SDF4-202ENST00000360001 KRT3P12035 628 aa24.44■■□□□ 1.5
SDF4-202ENST00000360001 SLC1A1P43005 524 aa24.44■■□□□ 1.5
SDF4-202ENST00000360001 MARCKSL1P49006 195 aa24.44■■□□□ 1.5
SDF4-202ENST00000360001 RPL34P49207 117 aaKnown RBP24.44■■□□□ 1.5
SDF4-202ENST00000360001 OGDHQ02218 1023 aa24.44■■□□□ 1.5
SDF4-202ENST00000360001 FAM183BPQ6ZVS7 135 aa24.44■■□□□ 1.5
SDF4-202ENST00000360001 CTAGE6Q86UF2 777 aa24.44■■□□□ 1.5
SDF4-202ENST00000360001 CTAGE4Q8IX94 777 aa24.44■■□□□ 1.5
SDF4-202ENST00000360001 MYCBPAPQ8TBZ2 947 aa24.44■■□□□ 1.5
SDF4-202ENST00000360001 PCED1BQ96HM7 432 aa24.44■■□□□ 1.5
SDF4-202ENST00000360001 RNF14Q9UBS8 474 aa24.44■■□□□ 1.5
SDF4-202ENST00000360001 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.44■■□□□ 1.55e-12■□□□□ 10
SDF4-202ENST00000360001 IP6K2Q9UHH9 426 aa24.44■■□□□ 1.5
SDF4-202ENST00000360001 V9GYY5 206 aaPredicted RBP24.44■■□□□ 1.5
SDF4-202ENST00000360001 COL4A6Q14031 1691 aa24.44■■□□□ 1.5
SDF4-202ENST00000360001 ALDH2P05091 517 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 CTNNA2P26232 953 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 MAN1A1P33908 653 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 CTNNA1P35221 906 aaKnown RBP24.43■■□□□ 1.5
SDF4-202ENST00000360001 RFC1P35251 1148 aaPredicted RBP24.43■■□□□ 1.5
SDF4-202ENST00000360001 PEX5P50542 639 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 DCAF12L1Q5VU92 463 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 ZNF572Q7Z3I7 529 aaPredicted RBP24.43■■□□□ 1.5
SDF4-202ENST00000360001 LRRC43Q8N309 656 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 OR10T2Q8NGX3 314 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 JOSD2Q8TAC2 188 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 TSC1Q92574 1164 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 PKMYT1Q99640 499 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 METTL5Q9NRN9 209 aaKnown RBP24.43■■□□□ 1.5
SDF4-202ENST00000360001 MARCH5Q9NX47 278 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 ADAM28Q9UKQ2 775 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 XPO1O14980 1071 aaKnown RBP24.43■■□□□ 1.5
SDF4-202ENST00000360001 TRAPPC3O43617 180 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 DGKIO75912 1065 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 PLA2G4AP47712 749 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 CDR1P51861 262 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 INTS6LQ5JSJ4 861 aaKnown RBP24.43■■□□□ 1.5
SDF4-202ENST00000360001 FAM171BQ6P995 826 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 RSRC2Q7L4I2 434 aaKnown RBP24.43■■□□□ 1.5
SDF4-202ENST00000360001 TMEM199Q8N511 208 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 PIWIL1Q96J94 861 aaKnown RBP24.43■■□□□ 1.5
SDF4-202ENST00000360001 TMEM175Q9BSA9 504 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 MED10Q9BTT4 135 aa24.43■■□□□ 1.5
SDF4-202ENST00000360001 CAPN15O75808 1086 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 GALTP07902 379 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 NPR3P17342 541 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 YWHAHQ04917 246 aaPredicted RBP24.42■■□□□ 1.5
SDF4-202ENST00000360001 CFAP221Q4G0U5 840 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 FAM102AQ5T9C2 384 aaPredicted RBP24.42■■□□□ 1.5
SDF4-202ENST00000360001 CCDC181Q5TID7 509 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 OR6B2Q6IFH4 312 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 FAM35AQ86V20 835 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 THEM5Q8N1Q8 247 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 UBL4BQ8N7F7 174 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 TOP1MTQ969P6 601 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 COLEC11Q9BWP8 271 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 CARD9Q9H257 536 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 CYLDQ9NQC7 956 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 LCMT1Q9UIC8 334 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 FAN1Q9Y2M0 1017 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 PCDHA3Q9Y5H8 950 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 CCDC66A2RUB6 948 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 BEST1O76090 585 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 DAB2IPQ5VWQ8 1189 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 OLFML1Q6UWY5 402 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.42■■□□□ 1.5
SDF4-202ENST00000360001 HSFY1Q96LI6 401 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 TMEM209Q96SK2 561 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 VWA8A3KMH1 1905 aa24.42■■□□□ 1.5
SDF4-202ENST00000360001 ALPK3Q96L96 1907 aa24.41■■□□□ 1.5
SDF4-202ENST00000360001 PAPSS1O43252 624 aaPredicted RBP24.41■■□□□ 1.5
SDF4-202ENST00000360001 CEP104O60308 925 aa24.41■■□□□ 1.5
SDF4-202ENST00000360001 FAM200BP0CF97 657 aa24.41■■□□□ 1.5
SDF4-202ENST00000360001 PAFAH1B1P43034 410 aa24.41■■□□□ 1.5
SDF4-202ENST00000360001 BCAR1P56945 870 aa24.41■■□□□ 1.5
SDF4-202ENST00000360001 SNX16P57768 344 aa24.41■■□□□ 1.5
SDF4-202ENST00000360001 CLEC20AQ6ZU45 233 aa24.41■■□□□ 1.5
SDF4-202ENST00000360001 FNIP1Q8TF40 1166 aa24.41■■□□□ 1.5
SDF4-202ENST00000360001 KRT82Q9NSB4 513 aa24.41■■□□□ 1.5
SDF4-202ENST00000360001 OAZ2O95190 189 aa24.4■■□□□ 1.5
SDF4-202ENST00000360001 ACRP10323 421 aa24.4■■□□□ 1.5
SDF4-202ENST00000360001 SLC8A3P57103 927 aa24.4■■□□□ 1.5
SDF4-202ENST00000360001 DEFB103AP81534 67 aa24.4■■□□□ 1.5
SDF4-202ENST00000360001 ERCC6LQ2NKX8 1250 aa24.4■■□□□ 1.5
SDF4-202ENST00000360001 PIGZQ86VD9 579 aa24.4■■□□□ 1.5
SDF4-202ENST00000360001 LRRTM3Q86VH5 581 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms