RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 PTPN20Q4JDL3 420 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 FAM182AQ5T1J6 154 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 PARP9Q8IXQ6 854 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 FBXO36Q8NEA4 188 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 SGSM3Q96HU1 749 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 AP5M1Q9H0R1 490 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 SETD4Q9NVD3 440 aa11.72□□□□□ -0.53
SSU72-202ENST00000359060 HUS1O60921 280 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 ARIH2O95376 493 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 DRD4P21917 467 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 PDE1BQ01064 536 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 CRELD2Q6UXH1 353 aaPredicted RBP11.71□□□□□ -0.53
SSU72-202ENST00000359060 ZDHHC14Q8IZN3 488 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 SIX6OS1Q8N1H7 587 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 GBP7Q8N8V2 638 aaPredicted RBP11.71□□□□□ -0.53
SSU72-202ENST00000359060 CDCA5Q96FF9 252 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 LRRC37BQ96QE4 947 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 RNPEPQ9H4A4 650 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 SPON1Q9HCB6 807 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 TSPAN16Q9UKR8 245 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 NENFQ9UMX5 172 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 NOD1Q9Y239 953 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 CDK5RAP2Q96SN8 1893 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 APOL1O14791 398 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 CHUKO15111 745 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 VDRP11473 427 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 MMP13P45452 471 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 RNASELQ05823 741 aaKnown RBP11.71□□□□□ -0.53
SSU72-202ENST00000359060 MORF4L2Q15014 288 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 C15orf59Q2T9L4 293 aaPredicted RBP11.71□□□□□ -0.53
SSU72-202ENST00000359060 ZNF484Q5JVG2 852 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 LVRNQ6Q4G3 990 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 KIAA0319LQ8IZA0 1049 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 CYTH2Q99418 400 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 PRM3Q9NNZ6 103 aa11.71□□□□□ -0.53
SSU72-202ENST00000359060 COPEO14579 308 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 LPXNO60711 386 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 LGALS2P05162 132 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 SAT1P21673 171 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 RASSF2P50749 326 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 PKN2Q16513 984 aaKnown RBP11.71□□□□□ -0.54
SSU72-202ENST00000359060 TMEM192Q8IY95 271 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 CD101Q93033 1021 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 TSNARE1Q96NA8 513 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 IFT122Q9HBG6 1241 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 HES2Q9Y543 173 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 UBOX5O94941 541 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 RARBP10826 455 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 CYP2C9P11712 490 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 ADORA2AP29274 412 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 SLC8A1P32418 973 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 COPS2P61201 443 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 NME3Q13232 169 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 ANKRD20A8PQ5CZ79 823 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 LRRN4Q8WUT4 740 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 MAML1Q92585 1016 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 OSMRQ99650 979 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 PCDH9Q9HC56 1237 aa11.71□□□□□ -0.54
SSU72-202ENST00000359060 E5RJQ4 531 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 KRT37O76014 449 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 MAP2K2P36507 400 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 CYP1B1Q16678 543 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 TXNRD3NBQ6F5E7 133 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 SCUBE3Q8IX30 993 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 TLCD1Q96CP7 247 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 CPXM1Q96SM3 734 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 SNTG2Q9NY99 539 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 TJP2Q9UDY2 1190 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 CCDC195A0A1B0GUA6 201 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 MSCO60682 206 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 ACO1P21399 889 aaKnown RBP11.7□□□□□ -0.54
SSU72-202ENST00000359060 MMRN1Q13201 1228 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 RCN2Q14257 317 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 C6orf163Q5TEZ5 329 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 HEATR6Q6AI08 1181 aaKnown RBP11.7□□□□□ -0.54
SSU72-202ENST00000359060 ZCCHC9Q8N567 271 aaKnown RBP11.7□□□□□ -0.54
SSU72-202ENST00000359060 C12orf29Q8N999 325 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 DNAAF3Q8N9W5 541 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 FAM172AQ8WUF8 416 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 ERP27Q96DN0 273 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 RSRC1Q96IZ7 334 aaKnown RBP11.7□□□□□ -0.54
SSU72-202ENST00000359060 CNPY3Q9BT09 278 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 LRRC4CQ9HCJ2 640 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 CD248Q9HCU0 757 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 NPHS2Q9NP85 383 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 SENP1Q9P0U3 644 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 ZNF112Q9UJU3 913 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 hCG_1818297A0A087WSY0 165 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 GPR25O00155 361 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 SESN3P58005 492 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 CCDC14Q49A88 953 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 UBAP2Q5T6F2 1119 aaKnown RBP11.7□□□□□ -0.54
SSU72-202ENST00000359060 DEPDC1BQ8WUY9 529 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 RAB3IPQ96QF0 476 aaPredicted RBP11.7□□□□□ -0.54
SSU72-202ENST00000359060 TXLNGQ9NUQ3 528 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 ABCF3Q9NUQ8 709 aa11.7□□□□□ -0.54
SSU72-202ENST00000359060 ZC3H7BQ9UGR2 993 aaKnown RBP11.7□□□□□ -0.54
SSU72-202ENST00000359060 CPSF3Q9UKF6 684 aaKnown RBP11.7□□□□□ -0.54
SSU72-202ENST00000359060 SMG5Q9UPR3 1016 aaKnown RBP11.7□□□□□ -0.54
SSU72-202ENST00000359060 SIGLEC16A6NMB1 481 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms