RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 ZBTB6Q15916 424 aa15.67■□□□□ 0.1
GABPB1-202ENST00000359031 TAZQ16635 292 aa15.67■□□□□ 0.1
GABPB1-202ENST00000359031 C6orf118Q5T5N4 469 aa15.67■□□□□ 0.1
GABPB1-202ENST00000359031 IZUMO3Q5VZ72 239 aa15.67■□□□□ 0.1
GABPB1-202ENST00000359031 KAZNQ674X7 775 aa15.67■□□□□ 0.1
GABPB1-202ENST00000359031 TXNRD3NBQ6F5E7 133 aa15.67■□□□□ 0.1
GABPB1-202ENST00000359031 GSTA5Q7RTV2 222 aa15.67■□□□□ 0.1
GABPB1-202ENST00000359031 CCDC25Q86WR0 208 aa15.67■□□□□ 0.1
GABPB1-202ENST00000359031 BCAS4Q8TDM0 211 aa15.67■□□□□ 0.1
GABPB1-202ENST00000359031 RAPGEF5Q92565 580 aa15.67■□□□□ 0.1
GABPB1-202ENST00000359031 USP6NLQ92738 828 aa15.67■□□□□ 0.1
GABPB1-202ENST00000359031 NKD2Q969F2 451 aaPredicted RBP15.67■□□□□ 0.1
GABPB1-202ENST00000359031 ROPN1BQ9BZX4 212 aaPredicted RBP15.67■□□□□ 0.1
GABPB1-202ENST00000359031 ROPN1Q9HAT0 212 aaPredicted RBP15.67■□□□□ 0.1
GABPB1-202ENST00000359031 C3orf70A6NLC5 250 aaPredicted RBP15.66■□□□□ 0.1
GABPB1-202ENST00000359031 IGF2BP3O00425 579 aaKnown RBP eCLIP15.66■□□□□ 0.1
GABPB1-202ENST00000359031 CAND2O75155 1236 aa15.66■□□□□ 0.1
GABPB1-202ENST00000359031 AGTP01019 485 aa15.66■□□□□ 0.1
GABPB1-202ENST00000359031 RGS2P41220 211 aa15.66■□□□□ 0.1
GABPB1-202ENST00000359031 VCPP55072 806 aaKnown RBP15.66■□□□□ 0.1
GABPB1-202ENST00000359031 TRIP13Q15645 432 aaPredicted RBP15.66■□□□□ 0.1
GABPB1-202ENST00000359031 PTGISQ16647 500 aa15.66■□□□□ 0.1
GABPB1-202ENST00000359031 PRAMEF19Q5SWL8 479 aa15.66■□□□□ 0.1
GABPB1-202ENST00000359031 TTC19Q6DKK2 380 aaPredicted RBP15.66■□□□□ 0.1
GABPB1-202ENST00000359031 MFSD5Q6N075 450 aa15.66■□□□□ 0.1
GABPB1-202ENST00000359031 RELL1Q8IUW5 271 aa15.66■□□□□ 0.1
GABPB1-202ENST00000359031 ALLCQ8N6M5 410 aa15.66■□□□□ 0.1
GABPB1-202ENST00000359031 TTC13Q8NBP0 860 aa15.66■□□□□ 0.1
GABPB1-202ENST00000359031 SOCS4Q8WXH5 440 aa15.66■□□□□ 0.1
GABPB1-202ENST00000359031 APBA2Q99767 749 aa15.66■□□□□ 0.1
GABPB1-202ENST00000359031 EIF2AQ9BY44 585 aaKnown RBP15.66■□□□□ 0.1
GABPB1-202ENST00000359031 TRIM6Q9C030 488 aaPredicted RBP15.66■□□□□ 0.1
GABPB1-202ENST00000359031 AP5M1Q9H0R1 490 aa15.66■□□□□ 0.1
GABPB1-202ENST00000359031 EPN3Q9H201 632 aa15.66■□□□□ 0.1
GABPB1-202ENST00000359031 ASNSD1Q9NWL6 643 aa15.66■□□□□ 0.1
GABPB1-202ENST00000359031 FLRT1Q9NZU1 646 aa15.66■□□□□ 0.1
GABPB1-202ENST00000359031 TSPAN16Q9UKR8 245 aa15.66■□□□□ 0.1
GABPB1-202ENST00000359031 DNPEPQ9ULA0 475 aa15.66■□□□□ 0.1
GABPB1-202ENST00000359031 UBQLN1Q9UMX0 589 aaKnown RBP15.66■□□□□ 0.1
GABPB1-202ENST00000359031 GINS2Q9Y248 185 aa15.66■□□□□ 0.1
GABPB1-202ENST00000359031 SCN1AP35498 2009 aa15.66■□□□□ 0.1
GABPB1-202ENST00000359031 RGS16O15492 202 aaPredicted RBP15.65■□□□□ 0.1
GABPB1-202ENST00000359031 XPOTO43592 962 aaKnown RBP15.65■□□□□ 0.1
GABPB1-202ENST00000359031 RNF8O76064 485 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 RECQL4O94761 1208 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 ITGAVP06756 1048 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 CYP3A5P20815 502 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 PCK1P35558 622 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 CHKAP35790 457 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 OASLQ15646 514 aaKnown RBP15.65■□□□□ 0.1
GABPB1-202ENST00000359031 GOLGA7BQ2TAP0 167 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 FAM102AQ5T9C2 384 aaPredicted RBP15.65■□□□□ 0.1
GABPB1-202ENST00000359031 HIBCHQ6NVY1 386 aaPredicted RBP15.65■□□□□ 0.1
GABPB1-202ENST00000359031 ALKAL1Q6UXT8 129 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 UNC93AQ86WB7 457 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 ARFGAP1Q8N6T3 406 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 CD99L2Q8TCZ2 262 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 ZMAT2Q96NC0 199 aaKnown RBP15.65■□□□□ 0.1
GABPB1-202ENST00000359031 FAM118BQ9BPY3 351 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 TUBGCP4Q9UGJ1 667 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 DOCK3Q8IZD9 2030 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 DNALI1O14645 258 aaPredicted RBP15.65■□□□□ 0.1
GABPB1-202ENST00000359031 CD4P01730 458 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 GPD1P21695 349 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 VPS41P49754 854 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 ZNF143P52747 638 aaPredicted RBP15.65■□□□□ 0.1
GABPB1-202ENST00000359031 SNX17Q15036 470 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 BBS12Q6ZW61 710 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 EMC1Q8N766 993 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 UBA3Q8TBC4 463 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 DNAJB3Q8WWF6 145 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 ACSF2Q96CM8 615 aaPredicted RBP15.65■□□□□ 0.1
GABPB1-202ENST00000359031 ZNF560Q96MR9 790 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 CNPY3Q9BT09 278 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 ZWILCHQ9H900 591 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 CDHR5Q9HBB8 845 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 PCDH9Q9HC56 1237 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 LRRC4CQ9HCJ2 640 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 ZNF148Q9UQR1 794 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 SNX9Q9Y5X1 595 aa15.65■□□□□ 0.1
GABPB1-202ENST00000359031 DPYSL4O14531 572 aa15.64■□□□□ 0.09
GABPB1-202ENST00000359031 RASGRF2O14827 1237 aa15.64■□□□□ 0.09
GABPB1-202ENST00000359031 TTC4O95801 387 aa15.64■□□□□ 0.09
GABPB1-202ENST00000359031 MYL3P08590 195 aa15.64■□□□□ 0.09
GABPB1-202ENST00000359031 KDELR1P24390 212 aa15.64■□□□□ 0.09
GABPB1-202ENST00000359031 IL1R2P27930 398 aa15.64■□□□□ 0.09
GABPB1-202ENST00000359031 SNX16P57768 344 aa15.64■□□□□ 0.09
GABPB1-202ENST00000359031 P3H1Q32P28 736 aa15.64■□□□□ 0.09
GABPB1-202ENST00000359031 TNFAIP8L3Q5GJ75 292 aa15.64■□□□□ 0.09
GABPB1-202ENST00000359031 C9orf57Q5W0N0 161 aa15.64■□□□□ 0.09
GABPB1-202ENST00000359031 FOXR1Q6PIV2 292 aa15.64■□□□□ 0.09
GABPB1-202ENST00000359031 C17orf99Q6UX52 265 aa15.64■□□□□ 0.09
GABPB1-202ENST00000359031 FAM183BPQ6ZVS7 135 aa15.64■□□□□ 0.09
GABPB1-202ENST00000359031 ZCCHC9Q8N567 271 aaKnown RBP15.64■□□□□ 0.09
GABPB1-202ENST00000359031 SLC35B2Q8TB61 432 aa15.64■□□□□ 0.09
GABPB1-202ENST00000359031 LENG1Q96BZ8 264 aaPredicted RBP15.64■□□□□ 0.09
GABPB1-202ENST00000359031 MRPL45Q9BRJ2 306 aaKnown RBP15.64■□□□□ 0.09
GABPB1-202ENST00000359031 DNAI2Q9GZS0 605 aa15.64■□□□□ 0.09
GABPB1-202ENST00000359031 NXF3Q9H4D5 531 aaKnown RBP15.64■□□□□ 0.09
GABPB1-202ENST00000359031 PIN4Q9Y237 131 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms