RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 NT5C1BQ96P26 610 aa11.94□□□□□ -0.5
CNOT3-202ENST00000358389 CYLDQ9NQC7 956 aa11.94□□□□□ -0.5
CNOT3-202ENST00000358389 CCDC88AQ3V6T2 1871 aa11.94□□□□□ -0.5
CNOT3-202ENST00000358389 NOP56O00567 594 aaKnown RBP11.94□□□□□ -0.5
CNOT3-202ENST00000358389 SORBS2O94875 1100 aaKnown RBP11.94□□□□□ -0.5
CNOT3-202ENST00000358389 DLDP09622 509 aaKnown RBP11.94□□□□□ -0.5
CNOT3-202ENST00000358389 HADHBP55084 474 aaKnown RBP11.94□□□□□ -0.5
CNOT3-202ENST00000358389 FAAP100Q0VG06 881 aa11.94□□□□□ -0.5
CNOT3-202ENST00000358389 BST1Q10588 318 aa11.94□□□□□ -0.5
CNOT3-202ENST00000358389 TRPC3Q13507 836 aa11.94□□□□□ -0.5
CNOT3-202ENST00000358389 ZNF568Q3ZCX4 644 aa11.94□□□□□ -0.5
CNOT3-202ENST00000358389 SPDYAQ5MJ70 313 aa11.94□□□□□ -0.5
CNOT3-202ENST00000358389 FOXP3Q9BZS1 431 aa11.94□□□□□ -0.5
CNOT3-202ENST00000358389 USP29Q9HBJ7 922 aa11.94□□□□□ -0.5
CNOT3-202ENST00000358389 APOBEC2Q9Y235 224 aaKnown RBP11.94□□□□□ -0.5
CNOT3-202ENST00000358389 PARP4Q9UKK3 1724 aaKnown RBP11.94□□□□□ -0.5
CNOT3-202ENST00000358389 TFPTP0C1Z6 253 aa11.94□□□□□ -0.5
CNOT3-202ENST00000358389 SYDE2Q5VT97 1194 aa11.94□□□□□ -0.5
CNOT3-202ENST00000358389 C3orf67Q6ZVT6 689 aa11.94□□□□□ -0.5
CNOT3-202ENST00000358389 MAD1L1Q9Y6D9 718 aa11.94□□□□□ -0.5
CNOT3-202ENST00000358389 TRIM49D1C9J1S8 452 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 ZBTB5O15062 677 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 ATP9BO43861 1147 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 E2F6O75461 281 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 CYP1A2P05177 515 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 GLRA2P23416 452 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 COPAP53621 1224 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 GAD2Q05329 585 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 ACAD10Q6JQN1 1059 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 FBXO33Q7Z6M2 555 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 AMIGO2Q86SJ2 522 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 CYP2W1Q8TAV3 490 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 MAML3Q96JK9 1138 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 CBWD1Q9BRT8 395 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 SYT11Q9BT88 431 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 AMNQ9BXJ7 453 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 CAAP1Q9H8G2 361 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.93□□□□□ -0.5
CNOT3-202ENST00000358389 PCDH18Q9HCL0 1135 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 KAT6AQ92794 2004 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 E5RJQ4 531 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 RFX1P22670 979 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 FDFT1P37268 417 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 ALDH1A3P47895 512 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 HDAC4P56524 1084 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 MYLK3Q32MK0 819 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 HYIQ5T013 277 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 LPCAT2Q7L5N7 544 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 NANOGNBQ7Z5D8 188 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 HPS6Q86YV9 775 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 WDR75Q8IWA0 830 aaKnown RBP11.93□□□□□ -0.5
CNOT3-202ENST00000358389 SLCO2A1Q92959 643 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 FAM81BQ96LP2 452 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 CSRNP1Q96S65 589 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 PI4K2AQ9BTU6 479 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 MAF1Q9H063 256 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 SELENONQ9NZV5 590 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 ADCY6O43306 1168 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 POLR2MP0CAP2 368 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 SPATA31C1P0DKV0 1188 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 TAL1P17542 331 aaPredicted RBP11.93□□□□□ -0.5
CNOT3-202ENST00000358389 NFX1Q12986 1120 aaKnown RBP11.93□□□□□ -0.5
CNOT3-202ENST00000358389 NKX1-1Q15270 411 aaPredicted RBP11.93□□□□□ -0.5
CNOT3-202ENST00000358389 SMAD1Q15797 465 aaKnown RBP11.93□□□□□ -0.5
CNOT3-202ENST00000358389 RARS2Q5T160 578 aaKnown RBP11.93□□□□□ -0.5
CNOT3-202ENST00000358389 KRT80Q6KB66 452 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 KCNK13Q9HB14 408 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 GPAMQ9HCL2 828 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 TIMMDC1Q9NPL8 285 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 SAE1Q9UBE0 346 aaPredicted RBP11.93□□□□□ -0.5
CNOT3-202ENST00000358389 DMTF1Q9Y222 760 aa11.93□□□□□ -0.5
CNOT3-202ENST00000358389 VILLO15195 856 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 TLR3O15455 904 aaKnown RBP11.92□□□□□ -0.5
CNOT3-202ENST00000358389 KCNQ2O43526 872 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 SERPINB2P05120 415 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 AKR1B1P15121 316 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 PCSK6P29122 969 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 MSX2P35548 267 aaPredicted RBP11.92□□□□□ -0.5
CNOT3-202ENST00000358389 TAS2R40P59535 323 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 ATP1A4Q13733 1029 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 TMCO4Q5TGY1 634 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 TDRPQ86YL5 185 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 GAB3Q8WWW8 586 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 GFM2Q969S9 779 aaKnown RBP11.92□□□□□ -0.5
CNOT3-202ENST00000358389 SRPK1Q96SB4 655 aaKnown RBP11.92□□□□□ -0.5
CNOT3-202ENST00000358389 FERMT1Q9BQL6 677 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 PAIP1Q9H074 479 aaKnown RBP11.92□□□□□ -0.5
CNOT3-202ENST00000358389 RRN3Q9NYV6 651 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 IPO5O00410 1097 aaKnown RBP11.92□□□□□ -0.5
CNOT3-202ENST00000358389 CYB561D2O14569 222 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 TNFAIP8O95379 198 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 ATP2B4P23634 1241 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 QRICH1Q2TAL8 776 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 C16orf87Q6PH81 154 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 SLC4A9Q96Q91 983 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 HERC5Q9UII4 1024 aaKnown RBP11.92□□□□□ -0.5
CNOT3-202ENST00000358389 WDR37Q9Y2I8 494 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 AP4B1Q9Y6B7 739 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 ALOX15BO15296 676 aa11.92□□□□□ -0.5
CNOT3-202ENST00000358389 PPP1R11O60927 126 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms