RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 ABL2P42684 1182 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 PTPN9P43378 593 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 CAMKK2Q96RR4 588 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 ECSITQ9BQ95 431 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 RAD21L1Q9H4I0 556 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 PRKAG3Q9UGI9 489 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 GOLGA8TH3BQL2 631 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 ZNF284Q2VY69 593 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 ZNF57Q68EA5 555 aaPredicted RBP10.13□□□□□ -0.79
CHD3-202ENST00000358181 KIAA0408Q6ZU52 694 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 PEG10Q86TG7 708 aaKnown RBP10.13□□□□□ -0.79
CHD3-202ENST00000358181 CYP4Z1Q86W10 505 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 FAM45AQ8TCE6 357 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 DTX3LQ8TDB6 740 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 TM6SF1Q9BZW5 370 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 IP6K2Q9UHH9 426 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 DYTNA2CJ06 578 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 MYL2P10916 166 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 ARFIP2P53365 341 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 POMZP3Q6PJE2 187 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 TMC7Q7Z402 723 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 RELL1Q8IUW5 271 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 MICU2Q8IYU8 434 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 LRRC39Q96DD0 335 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 MRPL48Q96GC5 212 aaKnown RBP10.13□□□□□ -0.79
CHD3-202ENST00000358181 GOLPH3LQ9H4A5 285 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 MIEF1Q9NQG6 463 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 ZNF624Q9P2J8 865 aaPredicted RBP10.13□□□□□ -0.79
CHD3-202ENST00000358181 BTBD3Q9Y2F9 522 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 HIST1H2ABP04908 130 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 HOXC12P31275 282 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 PDX1P52945 283 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 MAN2A1Q16706 1144 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 CLEC16AQ2KHT3 1053 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 SV2CQ496J9 727 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 GNASQ5JWF2 1037 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 HIST3H2AQ7L7L0 130 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 ZNF564Q8TBZ8 553 aaPredicted RBP10.13□□□□□ -0.79
CHD3-202ENST00000358181 NSUN6Q8TEA1 469 aaKnown RBP10.13□□□□□ -0.79
CHD3-202ENST00000358181 RIN2Q8WYP3 895 aaPredicted RBP10.13□□□□□ -0.79
CHD3-202ENST00000358181 HIST1H2ACQ93077 130 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 GPRASP2Q96D09 838 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 TGS1Q96RS0 853 aaKnown RBP10.13□□□□□ -0.79
CHD3-202ENST00000358181 RRP15Q9Y3B9 282 aaKnown RBP10.13□□□□□ -0.79
CHD3-202ENST00000358181 IGSF1Q8N6C5 1336 aa10.13□□□□□ -0.79
CHD3-202ENST00000358181 NPHP3-ACAD11A0A0J9YXS1 232 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 MGAT4DA6NG13 374 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 PP2D1A8MPX8 630 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 TAF4O00268 1085 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 HNMTP50135 292 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 ZNF445P59923 1031 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 RAPSNQ13702 412 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 EDRF1Q3B7T1 1238 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 ZCCHC8Q6NZY4 707 aaKnown RBP10.12□□□□□ -0.79
CHD3-202ENST00000358181 TMEM143Q96AN5 459 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 ZNF354BQ96LW1 612 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 ACOX2Q99424 681 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 MRPL1Q9BYD6 325 aaKnown RBP10.12□□□□□ -0.79
CHD3-202ENST00000358181 TMEM39AQ9NV64 488 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 XPO7Q9UIA9 1087 aaKnown RBP10.12□□□□□ -0.79
CHD3-202ENST00000358181 GPSM3Q9Y4H4 160 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 PCDHB12Q9Y5F1 795 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 LOC102724159A0A0B4J2E5 919 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 M0R3G1 203 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 EPN2O95208 641 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 NPTXRO95502 500 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 CPA3P15088 417 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 ORC2Q13416 577 aaPredicted RBP10.12□□□□□ -0.79
CHD3-202ENST00000358181 PWP2Q15269 919 aaKnown RBP10.12□□□□□ -0.79
CHD3-202ENST00000358181 FBXO42Q6P3S6 717 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 FAR1Q8WVX9 515 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 TPD52L3Q96J77 140 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 ARIH1Q9Y4X5 557 aaPredicted RBP10.12□□□□□ -0.79
CHD3-202ENST00000358181 SMIM31A0A1B0GVY4 71 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 ENO4A6NNW6 628 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 HS6ST1O60243 411 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 PALMO75781 387 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 PRKCBP05771 671 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 CYP2F1P24903 491 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 ANXA11P50995 505 aaKnown RBP10.12□□□□□ -0.79
CHD3-202ENST00000358181 NT5DC3Q86UY8 548 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 MCEMP1Q8IX19 187 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 OSBPL1AQ9BXW6 950 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 MANSC1Q9H8J5 431 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 ING3Q9NXR8 418 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 FBXO40Q9UH90 709 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 PNMA6FA0A0J9YX94 578 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 ASB14A6NK59 587 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 HALP42357 657 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 KIF23Q02241 960 aaPredicted RBP10.12□□□□□ -0.79
CHD3-202ENST00000358181 DCAF6Q58WW2 860 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 KLHL17Q6TDP4 642 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 BSDC1Q9NW68 430 aaPredicted RBP10.12□□□□□ -0.79
CHD3-202ENST00000358181 TRMT6Q9UJA5 497 aaKnown RBP10.12□□□□□ -0.79
CHD3-202ENST00000358181 SH3D21A4FU49 640 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 URODP06132 367 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 CTCFP49711 727 aaPredicted RBP10.12□□□□□ -0.79
CHD3-202ENST00000358181 ARSEP51690 589 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 DEFA1P59665 94 aa10.12□□□□□ -0.79
CHD3-202ENST00000358181 DEFA3P59666 94 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms