RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 COL6A2P12110 1019 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 PPARDQ03181 441 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 ARMCX2Q7L311 632 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 SLC22A9Q8IVM8 553 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 CDKL3Q8IVW4 592 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 CGREF1Q99674 301 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 GPCPD1Q9NPB8 672 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 SUCOQ9UBS9 1254 aaKnown RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 STK39Q9UEW8 545 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 BARX2Q9UMQ3 279 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 SCAF8Q9UPN6 1271 aaKnown RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 FASP25445 335 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 CRABP2P29373 138 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 PRELID2Q8N945 189 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 PCDHA6Q9UN73 950 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 PCDHA8Q9Y5H6 950 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 HSPA4LO95757 839 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 MLNP12872 115 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 TNNI1P19237 187 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 LIG4P49917 911 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 PABPC4Q13310 644 aaKnown RBP eCLIP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 KRT73Q86Y46 540 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 CNDP2Q96KP4 475 aaKnown RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 FBXO28Q9NVF7 368 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 VPS28Q9UK41 221 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 MEGF6O75095 1541 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 MPOP05164 745 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 HP1BP3Q5SSJ5 553 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 TRIM74Q86UV6 250 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 TRIM73Q86UV7 250 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 GMCL1Q96IK5 515 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 FHDC1Q9C0D6 1143 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 CYLDQ9NQC7 956 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 AGPAT3Q9NRZ7 376 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 PCDHGA3Q9Y5H0 932 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 MYH1P12882 1939 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 MYH2Q9UKX2 1941 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 MYH4Q9Y623 1939 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 EDF1O60869 148 aaKnown RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 SPRP35270 261 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 ST13P50502 369 aaKnown RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 RTP1P59025 263 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 MRPS15P82914 257 aaKnown RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 CSTF3Q12996 717 aaKnown RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 EFHC2Q5JST6 749 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 EHD1Q9H4M9 534 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 GPHNQ9NQX3 736 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-204ENST00000358025 SUN2Q9UH99 717 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 TRHDEQ9UKU6 1024 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 PCDHB4Q9Y5E5 795 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 UFL1O94874 794 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 CYP3A4P08684 503 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 CYP11B1P15538 503 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 TRIM69Q86WT6 500 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 NPHS2Q9NP85 383 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 HESX1Q9UBX0 185 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 SHPRHQ149N8 1683 aa4.28□□□□□ -1.72
SYNE2-204ENST00000358025 NCKAP5LQ9HCH0 1330 aa4.28□□□□□ -1.73
SYNE2-204ENST00000358025 KLRC4O43908 158 aa4.28□□□□□ -1.73
SYNE2-204ENST00000358025 ASNSP08243 561 aa4.28□□□□□ -1.73
SYNE2-204ENST00000358025 SRGAP2CP0DJJ0 459 aa4.28□□□□□ -1.73
SYNE2-204ENST00000358025 PSMA2P25787 234 aa4.28□□□□□ -1.73
SYNE2-204ENST00000358025 MGAT5Q09328 741 aa4.28□□□□□ -1.73
SYNE2-204ENST00000358025 LPIN1Q14693 890 aa4.28□□□□□ -1.73
SYNE2-204ENST00000358025 FEZF2Q8TBJ5 459 aa4.28□□□□□ -1.73
SYNE2-204ENST00000358025 PRKAG3Q9UGI9 489 aa4.28□□□□□ -1.73
SYNE2-204ENST00000358025 TOM1L1O75674 476 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ANPEPP15144 967 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 VAV1P15498 845 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 LRRC59Q96AG4 307 aaKnown RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 C18orf8Q96DM3 657 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 MED15Q96RN5 788 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 PLIN2Q99541 437 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ING2Q9H160 280 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 SEC31BQ9NQW1 1179 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ITSN1Q15811 1721 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 PDE9AO76083 593 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 SLC10A5Q5PT55 438 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ZNF720Q7Z2F6 126 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 PLEKHO2Q8TD55 490 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 LRRC4BQ9NT99 713 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 WDR64B1ANS9 1081 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 HDAC3O15379 428 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 PSAPP07602 524 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 PYGMP11217 842 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 PCNAP12004 261 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 TGM2P21980 687 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ITGA8P53708 1063 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 TRIM60Q495X7 471 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 C4orf32Q8N8J7 132 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 PDZD8Q8NEN9 1154 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 RP9Q8TA86 221 aaKnown RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 GJA10Q969M2 543 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 FAM167AQ96KS9 214 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 PLLPQ9Y342 182 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 DNAJC6O75061 913 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 A1BGP04217 495 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 RALAP11233 206 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 COPB2P35606 906 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 OLR1P78380 273 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms