RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 UXTQ9UBK9 157 aaPredicted RBP9.23□□□□□ -0.93
COL4A3BP-202ENST00000357457 FASNP49327 2511 aaKnown RBP9.23□□□□□ -0.93
COL4A3BP-202ENST00000357457 AKAP13Q12802 2813 aa9.23□□□□□ -0.93
COL4A3BP-202ENST00000357457 FREM2Q5SZK8 3169 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 C4orf47A7E2U8 309 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 CDX4O14627 284 aaPredicted RBP9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 IL18RAPO95256 599 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 USP17L7P0C7H9 530 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 PLCG1P19174 1290 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 CYP2F1P24903 491 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 PNPLA4P41247 253 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 RPL10AP62906 217 aaKnown RBP9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 CREB5Q02930 508 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 USP4Q13107 963 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 POSTNQ15063 836 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 DDR2Q16832 855 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 CFAP221Q4G0U5 840 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 SDHAF4Q5VUM1 108 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 DAB2IPQ5VWQ8 1189 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 PMS2CLQ68D20 193 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 PSAPL1Q6NUJ1 521 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 LIMS2Q7Z4I7 341 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 C11orf74Q86VG3 221 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 RASSF3Q86WH2 238 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 TMEM86AQ8N2M4 240 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 KIAA1958Q8N8K9 716 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 CCDC26Q8TAB7 109 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 ATP2A3Q93084 1043 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 ACDQ96AP0 544 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 ZNF560Q96MR9 790 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 SLC22A12Q96S37 553 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 LINC00597Q9H2U6 94 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 GDAP2Q9NXN4 497 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 L1RE1Q9UN81 338 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 MAGED2Q9UNF1 606 aaPredicted RBP9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 KIF3AQ9Y496 699 aa9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 DSPP15924 2871 aaKnown RBP9.22□□□□□ -0.93
COL4A3BP-202ENST00000357457 SMG1Q96Q15 3661 aaKnown RBP9.21□□□□□ -0.93
COL4A3BP-202ENST00000357457 HELZP42694 1942 aaKnown RBP9.21□□□□□ -0.93
COL4A3BP-202ENST00000357457 LNP1A1A4G5 178 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 K7EQS6 105 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 GABRDO14764 452 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 GIPC1O14908 333 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 CEACAM1P13688 526 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 PFKLP17858 780 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 CSRP1P21291 193 aaKnown RBP9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 LONP1P36776 959 aaKnown RBP9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 DGKEP52429 567 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 WNT7BP56706 349 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 ZXDBP98169 803 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 MYL7Q01449 175 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 GRIN1Q05586 938 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 NR1H3Q13133 447 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 DHX8Q14562 1220 aaKnown RBP9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 USP39Q53GS9 565 aaKnown RBP9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 INTS6LQ5JSJ4 861 aaKnown RBP9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 SCARA3Q6AZY7 606 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 FAM171BQ6P995 826 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 LRRC52Q8N7C0 313 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 C1orf127Q8N9H9 656 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 STKLD1Q8NE28 680 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 OLIG1Q8TAK6 271 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 SH3RF2Q8TEC5 729 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 USP33Q8TEY7 942 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 POMGNT1Q8WZA1 660 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 LARP4BQ92615 738 aaKnown RBP9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 HVCN1Q96D96 273 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 FUBP3Q96I24 572 aaKnown RBP eCLIP9.21□□□□□ -0.948e-7■□□□□ 10.1
COL4A3BP-202ENST00000357457 CEP295NLQ96MC4 621 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 EDEM2Q9BV94 578 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 IKZF4Q9H2S9 585 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 ZHX3Q9H4I2 956 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 DDX43Q9NXZ2 648 aaKnown RBP9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 PPP4R2Q9NY27 417 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 GTF3C4Q9UKN8 822 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 ARHGAP26Q9UNA1 814 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 AGAP1Q9UPQ3 857 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 WNT6Q9Y6F9 365 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 CEP192Q8TEP8 1941 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 PLXND1Q9Y4D7 1925 aa9.21□□□□□ -0.94
COL4A3BP-202ENST00000357457 TNRC6BQ9UPQ9 1833 aaKnown RBP9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 PKD1L2Q7Z442 2459 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 A0A0A0MRY4 1105 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 TRAV19A0A0A6YYK7 116 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 C1QTNF9BB2RNN3 333 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 KHNYNO15037 678 aaKnown RBP9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 HUS1O60921 280 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 TBCAO75347 108 aaKnown RBP9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 BMP15O95972 392 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 LDHAP00338 332 aaKnown RBP9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 KRT18P05783 430 aaKnown RBP9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 C1QTNF9P0C862 333 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 HDCP19113 662 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 POLR2BP30876 1174 aaKnown RBP9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 OPRD1P41143 372 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 MAGEA11P43364 429 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 IFNAR2P48551 515 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 LHX1P48742 406 aa9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 NOVA1P51513 510 aaKnown RBP9.2□□□□□ -0.94
COL4A3BP-202ENST00000357457 KCNA1Q09470 495 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms