RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 ASTN2O75129 1339 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 COL5A3P25940 1745 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 NRAPQ86VF7 1730 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 TMEM247A6NEH6 219 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 TCEA3O75764 348 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 KITP10721 976 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 KLRC2P26717 231 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 PTPN4P29074 926 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 RTP1P59025 263 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 NR1H3Q13133 447 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 EAPPQ56P03 285 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 GRAMD4Q6IC98 578 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 DUS1LQ6P1R4 473 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 NANOGNBQ7Z5D8 188 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 TTC7BQ86TV6 843 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 NLRX1Q86UT6 975 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 GPD1LQ8N335 351 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 INPP5DQ92835 1189 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 KCNN1Q92952 543 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 TRIM11Q96F44 468 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 ABHD8Q96I13 439 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 MIPEPQ99797 713 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 ARL8BQ9NVJ2 186 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 UMODL1Q5DID0 1318 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 MAP3K7O43318 606 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 PSTPIP1O43586 416 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 ESRRAP11474 423 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 VAV1P15498 845 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 ARFIP2P53365 341 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 GEMIN4P57678 1058 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 TMEM259Q4ZIN3 620 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 CYP4A22Q5TCH4 519 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 SLC39A4Q6P5W5 647 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 CCDC62Q6P9F0 684 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 CTAGE3PQ8IX95 158 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 NME8Q8N427 588 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 RIBC1Q8N443 379 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 EXD1Q8NHP7 514 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 DENND1AQ8TEH3 1009 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 NAT14Q8WUY8 206 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 RSPH1Q8WYR4 309 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 ZNF516Q92618 1163 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 MPP4Q96JB8 637 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 TTC25Q96NG3 672 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 FAM111AQ96PZ2 611 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 TAAR1Q96RJ0 339 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 CYTH2Q99418 400 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 PAFAH2Q99487 392 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 TRIM55Q9BYV6 548 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 MANSC1Q9H8J5 431 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 AGO4Q9HCK5 861 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 GABBR1Q9UBS5 961 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 MARCOQ9UEW3 520 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 RPL26L1Q9UNX3 145 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 KIF13BQ9NQT8 1826 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 ADAMTSL1Q8N6G6 1762 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 DHX15O43143 795 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 CCDC22O60826 627 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 BAG2O95816 211 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 CD97P48960 835 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 CDK7P50613 346 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 WNT7BP56706 349 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 PSMC5P62195 406 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 MRPS9P82933 396 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 EN1Q05925 392 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 DACT2Q5SW24 774 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 ANKRD22Q5VYY1 191 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 LRRC74BQ6ZQY2 392 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 MON1BQ7L1V2 547 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 C12orf56Q8IXR9 622 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 FEZF2Q8TBJ5 459 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 RSAD2Q8WXG1 361 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 SENP7Q9BQF6 1050 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 TCHPQ9BT92 498 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 TSSK1BQ9BXA7 367 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 CADM1Q9BY67 442 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 ASCC2Q9H1I8 757 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 ARHGEF38Q9NXL2 777 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 SEPT9Q9UHD8 586 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 TMX2Q9Y320 296 aa8.62□□□□□ -1.03
CDC42SE1-201ENST00000357235 CCDC195A0A1B0GUA6 201 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 A6NJR5 290 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 LSM1O15116 133 aaKnown RBP8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 LPXNO60711 386 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 CAPN15O75808 1086 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 MT-ND3P03897 115 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 MUTP22033 750 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 GLRA2P23416 452 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 VARSP26640 1264 aaKnown RBP8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 CA8P35219 290 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 NLRP11P59045 1033 aaKnown RBP8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 GCNT1Q02742 428 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 THOC5Q13769 683 aaKnown RBP8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 R3HDM1Q15032 1099 aaKnown RBP8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 DNAJC24Q6P3W2 148 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 SCARA5Q6ZMJ2 495 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 C4orf50Q6ZRC1 276 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 ANO5Q75V66 913 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 MARK2Q7KZI7 788 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms