RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 FAM50BQ9Y247 325 aa16.96■□□□□ 0.31
FDPS-201ENST00000356657 O00370 1275 aa16.95■□□□□ 0.3
FDPS-201ENST00000356657 FOXN3O00409 490 aaPredicted RBP16.95■□□□□ 0.3
FDPS-201ENST00000356657 LINC01565O15544 149 aa16.95■□□□□ 0.3
FDPS-201ENST00000356657 SETSIPP0DME0 302 aa16.95■□□□□ 0.3
FDPS-201ENST00000356657 NPR3P17342 541 aa16.95■□□□□ 0.3
FDPS-201ENST00000356657 SOX5P35711 763 aa16.95■□□□□ 0.3
FDPS-201ENST00000356657 LTBRP36941 435 aa16.95■□□□□ 0.3
FDPS-201ENST00000356657 BCAT1P54687 386 aa16.95■□□□□ 0.3
FDPS-201ENST00000356657 AAK1Q2M2I8 961 aa16.95■□□□□ 0.3
FDPS-201ENST00000356657 LCLAT1Q6UWP7 414 aa16.95■□□□□ 0.3
FDPS-201ENST00000356657 VSTM4Q8IW00 320 aa16.95■□□□□ 0.3
FDPS-201ENST00000356657 C12orf29Q8N999 325 aa16.95■□□□□ 0.3
FDPS-201ENST00000356657 ANKRD52Q8NB46 1076 aa16.95■□□□□ 0.3
FDPS-201ENST00000356657 SMRP1Q8NCR6 262 aa16.95■□□□□ 0.3
FDPS-201ENST00000356657 ATXN2LQ8WWM7 1075 aaKnown RBP16.95■□□□□ 0.3
FDPS-201ENST00000356657 UBXN6Q9BZV1 441 aa16.95■□□□□ 0.3
FDPS-201ENST00000356657 NLRC4Q9NPP4 1024 aa16.95■□□□□ 0.3
FDPS-201ENST00000356657 KRT82Q9NSB4 513 aa16.95■□□□□ 0.3
FDPS-201ENST00000356657 FAM49BQ9NUQ9 324 aa16.95■□□□□ 0.3
FDPS-201ENST00000356657 CD207Q9UJ71 328 aa16.95■□□□□ 0.3
FDPS-201ENST00000356657 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.95■□□□□ 0.3
FDPS-201ENST00000356657 GREB1Q4ZG55 1949 aa16.95■□□□□ 0.3
FDPS-201ENST00000356657 EPHB6O15197 1021 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 AP1G2O75843 785 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 FGF19O95750 216 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 SPATA31D3P0C874 917 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 CSH1P0DML2 217 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 CSH2P0DML3 217 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 CCDC130P13994 396 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 BDNFP23560 247 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 CYP2F1P24903 491 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 GRIK1P39086 918 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 PDE6CP51160 858 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 MRPS5P82675 430 aaKnown RBP16.94■□□□□ 0.3
FDPS-201ENST00000356657 ORC1Q13415 861 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 PPP1R26Q5T8A7 1209 aaPredicted RBP16.94■□□□□ 0.3
FDPS-201ENST00000356657 SYCE2Q6PIF2 218 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 SPATA31D4Q6ZUB0 917 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 GPR149Q86SP6 731 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 PSMG2Q969U7 264 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 RIPOR3Q96MK2 946 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 DUSP16Q9BY84 665 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 ZNF518BQ9C0D4 1074 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 CRISPLD1Q9H336 500 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 AVENQ9NQS1 362 aaPredicted RBP16.94■□□□□ 0.3
FDPS-201ENST00000356657 COMMD8Q9NX08 183 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 AJAP1Q9UKB5 411 aaPredicted RBP16.94■□□□□ 0.3
FDPS-201ENST00000356657 C2orf16Q68DN1 1984 aa16.94■□□□□ 0.3
FDPS-201ENST00000356657 CCDC195A0A1B0GUA6 201 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 RNF225M0QZC1 329 aaPredicted RBP16.93■□□□□ 0.3
FDPS-201ENST00000356657 FERP16591 822 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 MTHFRP42898 656 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 TFF2Q03403 129 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 BST2Q10589 180 aaKnown RBP16.93■□□□□ 0.3
FDPS-201ENST00000356657 TWF1Q12792 350 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 SMAD4Q13485 552 aaKnown RBP16.93■□□□□ 0.3
FDPS-201ENST00000356657 PAQR9Q6ZVX9 377 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 ZNF606Q8WXB4 792 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 SYN2Q92777 582 aaPredicted RBP16.93■□□□□ 0.3
FDPS-201ENST00000356657 TRMT2BQ96GJ1 504 aaKnown RBP16.93■□□□□ 0.3
FDPS-201ENST00000356657 ZNF512Q96ME7 567 aaPredicted RBP16.93■□□□□ 0.3
FDPS-201ENST00000356657 UXTQ9UBK9 157 aaPredicted RBP16.93■□□□□ 0.3
FDPS-201ENST00000356657 TSPAN16Q9UKR8 245 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 CAPN11Q9UMQ6 739 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 PCDHGC3Q9UN70 934 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 SLC27A5Q9Y2P5 690 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 LUC7L2Q9Y383 392 aaKnown RBP16.93■□□□□ 0.3
FDPS-201ENST00000356657 XIRP2A4UGR9 3374 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 ZNF638Q14966 1978 aaKnown RBP16.93■□□□□ 0.3
FDPS-201ENST00000356657 CYP26A1O43174 497 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 RFPL2O75678 378 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 RTN3O95197 1032 aaPredicted RBP16.93■□□□□ 0.3
FDPS-201ENST00000356657 ATF6P18850 670 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 KCNA5P22460 613 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 CLCN1P35523 988 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 ZBED6P86452 979 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 CCDC142Q17RM4 750 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 LEXMQ3ZCV2 418 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 ATAT1Q5SQI0 421 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 DENND5BQ6ZUT9 1274 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 TTC9BQ8N6N2 239 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 SMG7Q92540 1137 aaKnown RBP16.93■□□□□ 0.3
FDPS-201ENST00000356657 BAP1Q92560 729 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 ZNF707Q96C28 371 aaPredicted RBP16.93■□□□□ 0.3
FDPS-201ENST00000356657 S1PR5Q9H228 398 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 PIDD1Q9HB75 910 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 ZMYM5Q9UJ78 669 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 CEP83Q9Y592 693 aa16.93■□□□□ 0.3
FDPS-201ENST00000356657 DENND4AQ7Z401 1863 aa16.92■□□□□ 0.3
FDPS-201ENST00000356657 F8VP50 259 aa16.92■□□□□ 0.3
FDPS-201ENST00000356657 XPO1O14980 1071 aaKnown RBP16.92■□□□□ 0.3
FDPS-201ENST00000356657 THAP12O43422 761 aa16.92■□□□□ 0.3
FDPS-201ENST00000356657 CYP11B1P15538 503 aa16.92■□□□□ 0.3
FDPS-201ENST00000356657 PTPN2P17706 415 aa16.92■□□□□ 0.3
FDPS-201ENST00000356657 ADORA2BP29275 332 aa16.92■□□□□ 0.3
FDPS-201ENST00000356657 ZNF75DP51815 510 aa16.92■□□□□ 0.3
FDPS-201ENST00000356657 EPHA5P54756 1037 aa16.92■□□□□ 0.3
FDPS-201ENST00000356657 RBM10P98175 930 aaKnown RBP16.92■□□□□ 0.3
FDPS-201ENST00000356657 DLX2Q07687 328 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms