RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ERAP1Q9NZ08 941 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 MYH7P12883 1935 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 GMFGO60234 142 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 KLRC2P26717 231 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 VAC14Q08AM6 782 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 PROM2Q8N271 834 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 ZNF786Q8N393 782 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 TTC39CQ8N584 583 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 MRPS31Q92665 395 aaKnown RBP17.88■□□□□ 0.45
COL27A1-201ENST00000356083 COL26A1Q96A83 441 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 RTN2O75298 545 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 TFE3P19532 575 aaPredicted RBP17.88■□□□□ 0.45
COL27A1-201ENST00000356083 STX12Q86Y82 276 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 SMIM22K7EJ46 135 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 EPHB2P29323 1055 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 CCNG1P51959 295 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 PLA2G4FQ68DD2 849 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 KCNV1Q6PIU1 500 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 DOK6Q6PKX4 331 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 RTL3Q8N8U3 475 aaKnown RBP17.88■□□□□ 0.45
COL27A1-201ENST00000356083 UGGT2Q9NYU1 1516 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 GRIN3BO60391 1043 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 TALDO1P37837 337 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 CPA2P48052 419 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 SREBF2Q12772 1141 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 NLRP14Q86W24 1093 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 SLC9A7Q96T83 725 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 LCMT1Q9UIC8 334 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 BIRC5O15392 142 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 NDUFS2O75306 463 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 MRPS35P82673 323 aaKnown RBP17.87■□□□□ 0.45
COL27A1-201ENST00000356083 CACHD1Q5VU97 1274 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 UTP15Q8TED0 518 aaKnown RBP17.87■□□□□ 0.45
COL27A1-201ENST00000356083 PIK3R5Q8WYR1 880 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 C19orf60Q96EN9 201 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 METTL5Q9NRN9 209 aaKnown RBP17.87■□□□□ 0.45
COL27A1-201ENST00000356083 SUPT7LO94864 414 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 ORC1Q13415 861 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 NT5DC3Q86UY8 548 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 CDK20Q8IZL9 346 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 IL17RAQ96F46 866 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 SENP7Q9BQF6 1050 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 TRIM3O75382 744 aaPredicted RBP17.87■□□□□ 0.45
COL27A1-201ENST00000356083 LBPP18428 481 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 PTK6Q13882 451 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 ARMC4Q5T2S8 1044 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 SSH3Q8TE77 659 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 WDR41Q9HAD4 459 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 PIH1D3Q9NQM4 214 aaKnown RBP17.87■□□□□ 0.45
COL27A1-201ENST00000356083 EIF3LQ9Y262 564 aaKnown RBP17.87■□□□□ 0.45
COL27A1-201ENST00000356083 PDZK1P1A8MUH7 402 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 GH1P01241 217 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 CNPP09543 421 aaKnown RBP17.87■□□□□ 0.45
COL27A1-201ENST00000356083 PRUNE1Q86TP1 453 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 RIC8BQ9NVN3 520 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 F5H5T6 163 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 PQBP1O60828 265 aaKnown RBP17.87■□□□□ 0.45
COL27A1-201ENST00000356083 KATNA1O75449 491 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 MICALL2Q8IY33 904 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 MTFMTQ96DP5 389 aaKnown RBP17.87■□□□□ 0.45
COL27A1-201ENST00000356083 FAM20AQ96MK3 541 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 NUDT12Q9BQG2 462 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 SNX6Q9UNH7 406 aa17.87■□□□□ 0.45
COL27A1-201ENST00000356083 ZNF185O15231 689 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 MFAP3LO75121 409 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 GLRBP48167 497 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 UGP2Q16851 508 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 TMC7Q7Z402 723 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 CSGALNACT1Q8TDX6 532 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 TFB1MQ8WVM0 346 aaKnown RBP17.86■□□□□ 0.45
COL27A1-201ENST00000356083 SNPHO15079 494 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 HALP42357 657 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 NUDT2P50583 147 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 PTK7Q13308 1070 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 VSTM4Q8IW00 320 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 HPDLQ96IR7 371 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 VTA1Q9NP79 307 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 SOHLH2Q9NX45 425 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 HACL1Q9UJ83 578 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 TBX22Q9Y458 520 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 TBX3O15119 743 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 VPS26AO75436 327 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 ATP6V1B2P21281 511 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 LTKP29376 864 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 FAM83EQ2M2I3 478 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 ZNF544Q6NX49 715 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 CYP4Z1Q86W10 505 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 LDHDQ86WU2 507 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 ATG16L2Q8NAA4 619 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 HPS5Q9UPZ3 1129 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 A0A1W2PQ27 194 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 A0A1W2PQ64 194 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 A0A1W2PQD8 194 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 ZW10O43264 779 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 EGFRP00533 1210 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 CYP2C9P11712 490 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 C4BPBP20851 252 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 BAATQ14032 418 aaPredicted RBP17.86■□□□□ 0.45
COL27A1-201ENST00000356083 RCOR2Q8IZ40 523 aa17.86■□□□□ 0.45
COL27A1-201ENST00000356083 PARK7Q99497 189 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms