RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 CHST7Q9NS84 486 aa27.05■■□□□ 1.92
CLK2-201ENST00000355560 MIOSQ9NXC5 875 aa27.05■■□□□ 1.92
CLK2-201ENST00000355560 PTPN22Q9Y2R2 807 aa27.05■■□□□ 1.92
CLK2-201ENST00000355560 IBSPP21815 317 aaPredicted RBP27.04■■□□□ 1.92
CLK2-201ENST00000355560 CETN2P41208 172 aa27.04■■□□□ 1.92
CLK2-201ENST00000355560 PDE4CQ08493 712 aa27.04■■□□□ 1.92
CLK2-201ENST00000355560 MRPL10Q7Z7H8 261 aaKnown RBP27.04■■□□□ 1.92
CLK2-201ENST00000355560 ARFGAP1Q8N6T3 406 aa27.04■■□□□ 1.92
CLK2-201ENST00000355560 RNF169Q8NCN4 708 aa27.04■■□□□ 1.92
CLK2-201ENST00000355560 ACSF2Q96CM8 615 aaPredicted RBP27.04■■□□□ 1.92
CLK2-201ENST00000355560 SLITRK1Q96PX8 696 aa27.04■■□□□ 1.92
CLK2-201ENST00000355560 TRAIPQ9BWF2 469 aa27.04■■□□□ 1.92
CLK2-201ENST00000355560 HMX1Q9NP08 348 aaPredicted RBP27.04■■□□□ 1.92
CLK2-201ENST00000355560 CYB561D2O14569 222 aa27.04■■□□□ 1.92
CLK2-201ENST00000355560 IGFBP6P24592 240 aaPredicted RBP27.04■■□□□ 1.92
CLK2-201ENST00000355560 ADORA2BP29275 332 aa27.04■■□□□ 1.92
CLK2-201ENST00000355560 AARSP49588 968 aaKnown RBP eCLIP27.04■■□□□ 1.921e-6■■■□□ 15
CLK2-201ENST00000355560 ODF2Q5BJF6 829 aa27.04■■□□□ 1.92
CLK2-201ENST00000355560 FAM26DQ5JW98 314 aa27.04■■□□□ 1.92
CLK2-201ENST00000355560 LHX8Q68G74 356 aa27.04■■□□□ 1.92
CLK2-201ENST00000355560 SLAIN1Q8ND83 568 aa27.04■■□□□ 1.92
CLK2-201ENST00000355560 DNAI2Q9GZS0 605 aa27.04■■□□□ 1.92
CLK2-201ENST00000355560 GOLGA6BA6NDN3 693 aa27.03■■□□□ 1.92
CLK2-201ENST00000355560 PODXLO00592 558 aa27.03■■□□□ 1.92
CLK2-201ENST00000355560 ZNF623O75123 536 aa27.03■■□□□ 1.92
CLK2-201ENST00000355560 WARSP23381 471 aaKnown RBP27.03■■□□□ 1.92
CLK2-201ENST00000355560 CLCNKBP51801 687 aa27.03■■□□□ 1.92
CLK2-201ENST00000355560 SLC25A11Q02978 314 aaKnown RBP27.03■■□□□ 1.92
CLK2-201ENST00000355560 SNX1Q13596 522 aa27.03■■□□□ 1.92
CLK2-201ENST00000355560 DSC3Q14574 896 aa27.03■■□□□ 1.92
CLK2-201ENST00000355560 HSP90B2PQ58FF3 399 aa27.03■■□□□ 1.92
CLK2-201ENST00000355560 POLNQ7Z5Q5 900 aa27.03■■□□□ 1.92
CLK2-201ENST00000355560 OSTM1Q86WC4 334 aa27.03■■□□□ 1.92
CLK2-201ENST00000355560 ZNF296Q8WUU4 475 aaPredicted RBP27.03■■□□□ 1.92
CLK2-201ENST00000355560 TNIP3Q96KP6 325 aa27.03■■□□□ 1.92
CLK2-201ENST00000355560 ADAM2Q99965 735 aa27.03■■□□□ 1.92
CLK2-201ENST00000355560 SLC4A5Q9BY07 1137 aa27.03■■□□□ 1.92
CLK2-201ENST00000355560 DDX56Q9NY93 547 aaKnown RBP27.03■■□□□ 1.92
CLK2-201ENST00000355560 FRMPD3Q5JV73 1810 aa27.02■■□□□ 1.92
CLK2-201ENST00000355560 FKTNO75072 461 aa27.02■■□□□ 1.92
CLK2-201ENST00000355560 ECEL1O95672 775 aa27.02■■□□□ 1.92
CLK2-201ENST00000355560 MFSD7Q6UXD7 560 aa27.02■■□□□ 1.92
CLK2-201ENST00000355560 MREGQ8N565 214 aa27.02■■□□□ 1.92
CLK2-201ENST00000355560 R3HDM2Q9Y2K5 976 aaKnown RBP27.02■■□□□ 1.92
CLK2-201ENST00000355560 A0A0U1RQF3 1178 aa27.02■■□□□ 1.92
CLK2-201ENST00000355560 BCAT1P54687 386 aa27.02■■□□□ 1.92
CLK2-201ENST00000355560 FAM193AP78312 1265 aa27.02■■□□□ 1.92
CLK2-201ENST00000355560 BST2Q10589 180 aaKnown RBP27.02■■□□□ 1.92
CLK2-201ENST00000355560 TMEM110Q86TL2 294 aa27.02■■□□□ 1.92
CLK2-201ENST00000355560 ANKRD52Q8NB46 1076 aa27.02■■□□□ 1.92
CLK2-201ENST00000355560 RAPGEF5Q92565 580 aa27.02■■□□□ 1.92
CLK2-201ENST00000355560 TSEN34Q9BSV6 310 aaKnown RBP27.02■■□□□ 1.92
CLK2-201ENST00000355560 DCLK3Q9C098 648 aa27.02■■□□□ 1.92
CLK2-201ENST00000355560 TRPV6Q9H1D0 765 aa27.02■■□□□ 1.92
CLK2-201ENST00000355560 ZWILCHQ9H900 591 aa27.02■■□□□ 1.92
CLK2-201ENST00000355560 RSAD1Q9HA92 442 aa27.02■■□□□ 1.92
CLK2-201ENST00000355560 A0A1W2PQ45 241 aaPredicted RBP27.01■■□□□ 1.91
CLK2-201ENST00000355560 A0A1W2PQY0 241 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 LRRD1A4D1F6 860 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 HTRA3P83110 453 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 HADHQ16836 314 aaKnown RBP27.01■■□□□ 1.91
CLK2-201ENST00000355560 SMTNL2Q2TAL5 461 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 WSCD1Q658N2 575 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 OLFML1Q6UWY5 402 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 B3GALNT2Q8NCR0 500 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 SLC2A14Q8TDB8 520 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 STK32AQ8WU08 396 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 MED4Q9NPJ6 270 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 SNX24Q9Y343 169 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 CASTOR2A6NHX0 329 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 POLR3GO15318 223 aaPredicted RBP27.01■■□□□ 1.91
CLK2-201ENST00000355560 GRAP2O75791 330 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 KRT10P13645 584 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 GPD1P21695 349 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 IL1R2P27930 398 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 GRK4P32298 578 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 GGCXP38435 758 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 ZNF143P52747 638 aaPredicted RBP27.01■■□□□ 1.91
CLK2-201ENST00000355560 KAZNQ674X7 775 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 SPOCD1Q6ZMY3 1216 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 SLCO2A1Q92959 643 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 STARD7Q9NQZ5 370 aa27.01■■□□□ 1.91
CLK2-201ENST00000355560 C2CD4BA6NLJ0 364 aa27■■□□□ 1.91
CLK2-201ENST00000355560 CAND2O75155 1236 aa27■■□□□ 1.91
CLK2-201ENST00000355560 RNF8O76064 485 aa27■■□□□ 1.91
CLK2-201ENST00000355560 KRT7P08729 469 aa27■■□□□ 1.91
CLK2-201ENST00000355560 CKBP12277 381 aa27■■□□□ 1.91
CLK2-201ENST00000355560 FLT3P36888 993 aa27■■□□□ 1.91
CLK2-201ENST00000355560 DRG2P55039 364 aaKnown RBP27■■□□□ 1.91
CLK2-201ENST00000355560 COPS2P61201 443 aa27■■□□□ 1.91
CLK2-201ENST00000355560 ACAP1Q15027 740 aa27■■□□□ 1.91
CLK2-201ENST00000355560 TRNP1Q6NT89 227 aa27■■□□□ 1.91
CLK2-201ENST00000355560 C3orf58Q8NDZ4 430 aa27■■□□□ 1.91
CLK2-201ENST00000355560 SENP8Q96LD8 212 aa27■■□□□ 1.91
CLK2-201ENST00000355560 AGPSO00116 658 aa26.99■■□□□ 1.91
CLK2-201ENST00000355560 SNX16P57768 344 aa26.99■■□□□ 1.91
CLK2-201ENST00000355560 ADCY2Q08462 1091 aa26.99■■□□□ 1.91
CLK2-201ENST00000355560 ARHGEF6Q15052 776 aa26.99■■□□□ 1.91
CLK2-201ENST00000355560 KCNT1Q5JUK3 1230 aa26.99■■□□□ 1.91
CLK2-201ENST00000355560 SCUBE3Q8IX30 993 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms