RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 TTLL12Q14166 644 aaPredicted RBP9.82□□□□□ -0.84
SMG6-202ENST00000354901 BRDTQ58F21 947 aaPredicted RBP9.82□□□□□ -0.84
SMG6-202ENST00000354901 C6orf183Q5T699 404 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 SNRNP48Q6IEG0 339 aaKnown RBP9.82□□□□□ -0.84
SMG6-202ENST00000354901 C4orf50Q6ZRC1 276 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 SLC7A6OSQ96CW6 309 aaPredicted RBP9.82□□□□□ -0.84
SMG6-202ENST00000354901 ZNF668Q96K58 619 aaPredicted RBP9.82□□□□□ -0.84
SMG6-202ENST00000354901 PRKAG3Q9UGI9 489 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 TUBGCP4Q9UGJ1 667 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 LZTS1Q9Y250 596 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 COMMD3-BMI1R4GMX3 469 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 PCNTO95613 3336 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 PTPRJQ12913 1337 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 UMODL1Q5DID0 1318 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 RASA4BC9J798 803 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 RASA4O43374 803 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 IL9RQ01113 521 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 PRKCEQ02156 737 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 WASHC2DQ5SRD0 308 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 ZBTB46Q86UZ6 589 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 RASSF3Q86WH2 238 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 NME8Q8N427 588 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 VTI1AQ96AJ9 217 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 MIPEPQ99797 713 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 CORO1BQ9BR76 489 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 XPNPEP1Q9NQW7 623 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 BARX2Q9UMQ3 279 aaPredicted RBP9.82□□□□□ -0.84
SMG6-202ENST00000354901 TSC22D4Q9Y3Q8 395 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 HEY1Q9Y5J3 304 aa9.82□□□□□ -0.84
SMG6-202ENST00000354901 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.82□□□□□ -0.84
SMG6-202ENST00000354901 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.82□□□□□ -0.84
SMG6-202ENST00000354901 FSCN2O14926 492 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 RNASEH1O60930 286 aaKnown RBP9.81□□□□□ -0.84
SMG6-202ENST00000354901 E2F6O75461 281 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 PIAS1O75925 651 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 TCF4P15884 667 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 KRT15P19012 456 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 DSG3P32926 999 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 STRN3Q13033 797 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 RBM44Q6ZP01 1051 aaKnown RBP9.81□□□□□ -0.84
SMG6-202ENST00000354901 ARHGEF18Q6ZSZ5 1173 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 SAMD7Q7Z3H4 446 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 USP37Q86T82 979 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 SNF8Q96H20 258 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 CLPTM1LQ96KA5 538 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 RUNDC3BQ96NL0 473 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 TCHPQ9BT92 498 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 CADM1Q9BY67 442 aaKnown RBP9.81□□□□□ -0.84
SMG6-202ENST00000354901 TUT1Q9H6E5 874 aaKnown RBP9.81□□□□□ -0.84
SMG6-202ENST00000354901 LRRC19Q9H756 370 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 ANKEF1Q9NU02 776 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 ARMCX1Q9P291 453 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 RBBP6Q7Z6E9 1792 aaKnown RBP9.81□□□□□ -0.84
SMG6-202ENST00000354901 TP73O15350 636 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 PLA2G6O60733 806 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 MTA2O94776 668 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 LYPLA2O95372 231 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 LDHAP00338 332 aaKnown RBP9.81□□□□□ -0.84
SMG6-202ENST00000354901 LMNAP02545 664 aaKnown RBP9.81□□□□□ -0.84
SMG6-202ENST00000354901 ZSCAN5DPP0CG00 497 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 MTFR1Q15390 333 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 CYP1B1Q16678 543 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 PARP6Q2NL67 630 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 TDRD10Q5VZ19 366 aaKnown RBP9.81□□□□□ -0.84
SMG6-202ENST00000354901 NLRP9Q7RTR0 991 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 TAS1R3Q7RTX0 852 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 ANKS1BQ7Z6G8 1248 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 CATSPER2Q96P56 530 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 TARS2Q9BW92 718 aaKnown RBP9.81□□□□□ -0.84
SMG6-202ENST00000354901 DCLK3Q9C098 648 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 EBF3Q9H4W6 596 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 CNOT7Q9UIV1 285 aaKnown RBP9.81□□□□□ -0.84
SMG6-202ENST00000354901 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.81□□□□□ -0.84
SMG6-202ENST00000354901 HEMK1Q9Y5R4 338 aaPredicted RBP9.81□□□□□ -0.84
SMG6-202ENST00000354901 MYPNQ86TC9 1320 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 MYOCOSA0A1B0GUC4 107 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 TLR3O15455 904 aaKnown RBP9.81□□□□□ -0.84
SMG6-202ENST00000354901 TRPA1O75762 1119 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 IFNB1P01574 187 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 CETPP11597 493 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 TAC1P20366 129 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 SFNP31947 248 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 CDK7P50613 346 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 HMGCS2P54868 508 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 PLCB3Q01970 1234 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 NIPA1Q7RTP0 329 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 GLIS1Q8NBF1 620 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 GATA6Q92908 595 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 ATP6V0A1Q93050 837 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 ZBED3Q96IU2 234 aaPredicted RBP9.81□□□□□ -0.84
SMG6-202ENST00000354901 MFSD14AQ96MC6 490 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 OLFM3Q96PB7 478 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 TRAIPQ9BWF2 469 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 NACA2Q9H009 215 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 MYOZ2Q9NPC6 264 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 KRT82Q9NSB4 513 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 COQ4Q9Y3A0 265 aa9.81□□□□□ -0.84
SMG6-202ENST00000354901 TFPTP0C1Z6 253 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 T-ENOLP0DO92 83 aa9.8□□□□□ -0.84
SMG6-202ENST00000354901 ETS1P14921 441 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms