RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 FAM200BP0CF97 657 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 NPR3P17342 541 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 SYN1P17600 705 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 PLA2G4AP47712 749 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 TAP1Q03518 808 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 TUBB2AQ13885 445 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 BTG3Q14201 252 aaPredicted RBP16.46■□□□□ 0.23
CTSA-202ENST00000354880 MAPRE1Q15691 268 aaKnown RBP16.46■□□□□ 0.23
CTSA-202ENST00000354880 VARS2Q5ST30 1063 aaKnown RBP16.46■□□□□ 0.23
CTSA-202ENST00000354880 SPOUT1Q5T280 376 aaKnown RBP16.46■□□□□ 0.23
CTSA-202ENST00000354880 PSRC1Q6PGN9 363 aaPredicted RBP16.46■□□□□ 0.23
CTSA-202ENST00000354880 TMEM110Q86TL2 294 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 FAM35AQ86V20 835 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 CMTR2Q8IYT2 770 aaKnown RBP16.46■□□□□ 0.23
CTSA-202ENST00000354880 FEZF2Q8TBJ5 459 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 HSFY1Q96LI6 401 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 TMEM209Q96SK2 561 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 YME1L1Q96TA2 773 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 PKMYT1Q99640 499 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 TUBB2BQ9BVA1 445 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 SELENOOQ9BVL4 669 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 TRIM7Q9C029 511 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 CYLDQ9NQC7 956 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 AMFRQ9UKV5 643 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 SNX12Q9UMY4 172 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 PACSIN2Q9UNF0 486 aaPredicted RBP16.46■□□□□ 0.23
CTSA-202ENST00000354880 MRFAP1Q9Y605 127 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 ALG6Q9Y672 507 aa16.46■□□□□ 0.23
CTSA-202ENST00000354880 PTPRSQ13332 1948 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 TMEM110-MUSTN1A8MSY1 372 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 GOLGA8SH3BPF8 625 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 XPO1O14980 1071 aaKnown RBP16.45■□□□□ 0.22
CTSA-202ENST00000354880 FGFR3P22607 806 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 CDR1P51861 262 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 PTPROQ16827 1216 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 TMEM240Q5SV17 173 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 PPP1R15BQ5SWA1 713 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 DCUN1D2Q6PH85 259 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 CLEC20AQ6ZU45 233 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 CEP57Q86XR8 500 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 BCL7CQ8WUZ0 217 aaPredicted RBP16.45■□□□□ 0.22
CTSA-202ENST00000354880 MYLPFQ96A32 169 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 MCRS1Q96EZ8 462 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 MCEEQ96PE7 176 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.45■□□□□ 0.221e-6■■■□□ 18.7
CTSA-202ENST00000354880 KRT82Q9NSB4 513 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 CDC23Q9UJX2 597 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 HYOU1Q9Y4L1 999 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 TMEM191CA6NGB0 347 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 SIGLEC16A6NMB1 481 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 PIK3R2O00459 728 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 AP1G2O75843 785 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 GJB6O95452 261 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 KRT3P12035 628 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 PRLRP16471 622 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 RPL34P49207 117 aaKnown RBP16.45■□□□□ 0.22
CTSA-202ENST00000354880 EPHB4P54760 987 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 RPL7AP62424 266 aaKnown RBP16.45■□□□□ 0.22
CTSA-202ENST00000354880 MRPL58Q14197 206 aaKnown RBP16.45■□□□□ 0.22
CTSA-202ENST00000354880 RPS6KA1Q15418 735 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 KCNT2Q6UVM3 1135 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 LRRTM3Q86VH5 581 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 IGSF21Q96ID5 467 aa16.45■□□□□ 0.22
CTSA-202ENST00000354880 RIOK3O14730 519 aaKnown RBP16.44■□□□□ 0.22
CTSA-202ENST00000354880 BEST1O76090 585 aa16.44■□□□□ 0.22
CTSA-202ENST00000354880 GJB5O95377 273 aa16.44■□□□□ 0.22
CTSA-202ENST00000354880 TCP1P17987 556 aaKnown RBP16.44■□□□□ 0.22
CTSA-202ENST00000354880 COMTP21964 271 aa16.44■□□□□ 0.22
CTSA-202ENST00000354880 ACADSBP45954 432 aa16.44■□□□□ 0.22
CTSA-202ENST00000354880 MAP3K7CLP57077 242 aa16.44■□□□□ 0.22
CTSA-202ENST00000354880 OR6B2Q6IFH4 312 aa16.44■□□□□ 0.22
CTSA-202ENST00000354880 ZNF280DQ6N043 979 aa16.44■□□□□ 0.22
CTSA-202ENST00000354880 FAM183BPQ6ZVS7 135 aa16.44■□□□□ 0.22
CTSA-202ENST00000354880 PIGZQ86VD9 579 aa16.44■□□□□ 0.22
CTSA-202ENST00000354880 UBE2Q2Q8WVN8 375 aa16.44■□□□□ 0.22
CTSA-202ENST00000354880 SMARCD1Q96GM5 515 aa16.44■□□□□ 0.22
CTSA-202ENST00000354880 HES6Q96HZ4 224 aa16.44■□□□□ 0.22
CTSA-202ENST00000354880 B3GALT6Q96L58 329 aa16.44■□□□□ 0.22
CTSA-202ENST00000354880 ZNF558Q96NG5 402 aa16.44■□□□□ 0.22
CTSA-202ENST00000354880 OSBPL9Q96SU4 736 aa16.44■□□□□ 0.22
CTSA-202ENST00000354880 TMLHEQ9NVH6 421 aa16.44■□□□□ 0.22
CTSA-202ENST00000354880 CXXC1Q9P0U4 656 aaPredicted RBP16.44■□□□□ 0.22
CTSA-202ENST00000354880 LCMT1Q9UIC8 334 aa16.44■□□□□ 0.22
CTSA-202ENST00000354880 MRPL42Q9Y6G3 142 aaKnown RBP16.44■□□□□ 0.22
CTSA-202ENST00000354880 CARNS1A5YM72 827 aa16.43■□□□□ 0.22
CTSA-202ENST00000354880 SRGAP2O75044 1071 aa16.43■□□□□ 0.22
CTSA-202ENST00000354880 LAG3P18627 525 aa16.43■□□□□ 0.22
CTSA-202ENST00000354880 DNA2P51530 1060 aa16.43■□□□□ 0.22
CTSA-202ENST00000354880 CTXN3Q4LDR2 81 aa16.43■□□□□ 0.22
CTSA-202ENST00000354880 FAM102AQ5T9C2 384 aaPredicted RBP16.43■□□□□ 0.22
CTSA-202ENST00000354880 C4orf50Q6ZRC1 276 aa16.43■□□□□ 0.22
CTSA-202ENST00000354880 ZDHHC17Q8IUH5 632 aa16.43■□□□□ 0.22
CTSA-202ENST00000354880 DCP1BQ8IZD4 617 aaKnown RBP16.43■□□□□ 0.22
CTSA-202ENST00000354880 PSMB7Q99436 277 aa16.43■□□□□ 0.22
CTSA-202ENST00000354880 TTPALQ9BTX7 342 aa16.43■□□□□ 0.22
CTSA-202ENST00000354880 ZCWPW1Q9H0M4 648 aa16.43■□□□□ 0.22
CTSA-202ENST00000354880 METTL5Q9NRN9 209 aaKnown RBP16.43■□□□□ 0.22
CTSA-202ENST00000354880 ZMYND8Q9ULU4 1186 aaPredicted RBP16.43■□□□□ 0.22
CTSA-202ENST00000354880 OR6C75A6NL08 312 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 PAPSS1O43252 624 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms