RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 A0A0B4J269 797 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 GPR25O00155 361 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 ODC1P11926 461 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 RAG1P15918 1043 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 TKTL1P51854 596 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 NOL9Q5SY16 702 aaKnown RBP12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 TMEM63BQ5T3F8 832 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 DENND1BQ6P3S1 775 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 PPTC7Q8NI37 304 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 LRRN4Q8WUT4 740 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 HNRNPLLQ8WVV9 542 aaKnown RBP12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 VPS11Q9H270 941 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 TMEM134Q9H6X4 195 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 INTUQ9ULD6 942 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 EEF2KO00418 725 aaKnown RBP12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 ETFBP38117 255 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 ITGA8P53708 1063 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 GUCY1A3Q02108 690 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 MAPK7Q13164 816 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 PAPD7Q5XG87 772 aaKnown RBP12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 IRF2BP2Q7Z5L9 587 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 ERP44Q9BS26 406 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 ZNF263O14978 683 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 ENDOD1O94919 500 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 ASGR1P07306 291 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 ZBTB48P10074 688 aaPredicted RBP12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 TROVE2P10155 538 aaKnown RBP eCLIP12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 BRAFP15056 766 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 PMLP29590 882 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 PBX1P40424 430 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 BMT2Q1RMZ1 405 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 MEI1Q5TIA1 1274 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 FAM171A1Q5VUB5 890 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 ZNF410Q86VK4 478 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 NETO2Q8NC67 525 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 MBOAT7Q96N66 472 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 CACNG4Q9UBN1 327 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 HPCAL4Q9UM19 191 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 ADGRA3Q8IWK6 1321 aa12.92□□□□□ -0.34
PCDHB11-201ENST00000354757 CHUKO15111 745 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 MICAL2O94851 1124 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 IL9RQ01113 521 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 C15orf59Q2T9L4 293 aaPredicted RBP12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 SLC9A9Q8IVB4 645 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 SHC3Q92529 594 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 SENP8Q96LD8 212 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 APOL2Q9BQE5 337 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 TSPYL2Q9H2G4 693 aaPredicted RBP12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 ARHGAP28Q9P2N2 729 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 TLK1Q9UKI8 766 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 TRPV2Q9Y5S1 764 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 PROSCO94903 275 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 BDNFP23560 247 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 ADSSP30520 456 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 COILP38432 576 aaPredicted RBP12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 RPL7AP62424 266 aaKnown RBP12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 YWHAHQ04917 246 aaPredicted RBP12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 MAP7D1Q3KQU3 841 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 EFHC1Q5JVL4 640 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 CD302Q8IX05 232 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 ACTL9Q8TC94 416 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 YME1L1Q96TA2 773 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 PIH1D1Q9NWS0 290 aaKnown RBP12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 ITGA11Q9UKX5 1188 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 NEU2Q9Y3R4 380 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 CNTNAP2Q9UHC6 1331 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 NOL4O94818 638 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 BCAT1P54687 386 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 HTRA3P83110 453 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 OTUD4Q01804 1114 aaKnown RBP12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 BFSP2Q13515 415 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 NFIL3Q16649 462 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 CHSY1Q86X52 802 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 TMEM139Q8IV31 216 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 TMEM192Q8IY95 271 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 CASKIN2Q8WXE0 1202 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 SUDS3Q9H7L9 328 aaPredicted RBP12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 USP18Q9UMW8 372 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 MAFBQ9Y5Q3 323 aaPredicted RBP12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 HIBCHQ6NVY1 386 aaPredicted RBP12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 SDCCAG8Q86SQ7 713 aaPredicted RBP12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 DCP1BQ8IZD4 617 aaKnown RBP12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 NPLOC4Q8TAT6 608 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 UBN1Q9NPG3 1134 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 BFARQ9NZS9 450 aa12.91□□□□□ -0.34
PCDHB11-201ENST00000354757 FMO1Q01740 532 aa12.9□□□□□ -0.34
PCDHB11-201ENST00000354757 ADCY2Q08462 1091 aa12.9□□□□□ -0.34
PCDHB11-201ENST00000354757 RCN2Q14257 317 aa12.9□□□□□ -0.34
PCDHB11-201ENST00000354757 SLC29A2Q14542 456 aa12.9□□□□□ -0.34
PCDHB11-201ENST00000354757 C6orf118Q5T5N4 469 aa12.9□□□□□ -0.34
PCDHB11-201ENST00000354757 RNF135Q8IUD6 432 aa12.9□□□□□ -0.34
PCDHB11-201ENST00000354757 C4orf33Q8N1A6 199 aa12.9□□□□□ -0.34
PCDHB11-201ENST00000354757 SEPT8Q92599 483 aa12.9□□□□□ -0.34
PCDHB11-201ENST00000354757 ELAC2Q9BQ52 826 aaKnown RBP12.9□□□□□ -0.34
PCDHB11-201ENST00000354757 EIF2AQ9BY44 585 aaKnown RBP12.9□□□□□ -0.34
PCDHB11-201ENST00000354757 WDCPQ9H6R7 721 aa12.9□□□□□ -0.34
PCDHB11-201ENST00000354757 TUBGCP4Q9UGJ1 667 aa12.9□□□□□ -0.34
PCDHB11-201ENST00000354757 TOGARAM1Q9Y4F4 1720 aa12.9□□□□□ -0.34
PCDHB11-201ENST00000354757 RFC1P35251 1148 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms