RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 ITGA11Q9UKX5 1188 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 DNPEPQ9ULA0 475 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 TOGARAM1Q9Y4F4 1720 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 ATRNL1Q5VV63 1379 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 SPATA31A5Q5VU36 1347 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 SPATA31A6Q5VVP1 1343 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 SPATA31A7Q8IWB4 1347 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 TP73O15350 636 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 EPHB1P54762 984 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 NUP107P57740 925 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 GRM2Q14416 872 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 SPOCD1Q6ZMY3 1216 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 OTOP1Q7RTM1 612 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 TRIML2Q8N7C3 387 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 NLRP7Q8WX94 980 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 CCDC68Q9H2F9 335 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 NAV1Q8NEY1 1877 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 C15orf38-AP3S2A0A0A6YYH1 394 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 AP1G1O43747 822 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 CBFA2T3O75081 653 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 GLRA2P23416 452 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 TBXAS1P24557 533 aaPredicted RBP12.83□□□□□ -0.36
TRERF1-202ENST00000354325 POLR2BP30876 1174 aaKnown RBP12.83□□□□□ -0.36
TRERF1-202ENST00000354325 STIP1P31948 543 aaKnown RBP12.83□□□□□ -0.36
TRERF1-202ENST00000354325 PTPN7P35236 360 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 AQP5P55064 265 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 USP4Q13107 963 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 ARPINQ7Z6K5 226 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 PRUNE1Q86TP1 453 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 KREMEN1Q96MU8 473 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 RIT2Q99578 217 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 LXNQ9BS40 222 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 C17orf75Q9HAS0 396 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 IFT122Q9HBG6 1241 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 THAP1Q9NVV9 213 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 COQ4Q9Y3A0 265 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 MRPL11Q9Y3B7 192 aaKnown RBP12.83□□□□□ -0.36
TRERF1-202ENST00000354325 GAKO14976 1311 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 FAM86B1E9PN63 330 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 P4HBP07237 508 aaKnown RBP12.82□□□□□ -0.36
TRERF1-202ENST00000354325 FAM86B2P0C5J1 330 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 ETS2P15036 469 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 HDAC4P56524 1084 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 PPIDQ08752 370 aaKnown RBP12.82□□□□□ -0.36
TRERF1-202ENST00000354325 RBM44Q6ZP01 1051 aaKnown RBP12.82□□□□□ -0.36
TRERF1-202ENST00000354325 KSR1Q8IVT5 923 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 CNKSR2Q8WXI2 1034 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 RSPH1Q8WYR4 309 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 PANX3Q96QZ0 392 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 GOLGA8QA0A0J9YX86 632 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 FAM237BA0A1B0GVD1 139 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 GOLGA8OA6NCC3 632 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 GOLGA8NF8WBI6 632 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 DKC1O60832 514 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRERF1-202ENST00000354325 PDE5AO76074 875 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 FAM58BPP0C7Q3 252 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 PIM1P11309 404 aaPredicted RBP12.82□□□□□ -0.36
TRERF1-202ENST00000354325 ACADVLP49748 655 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 SLC18A2Q05940 514 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 DMP1Q13316 513 aaPredicted RBP12.82□□□□□ -0.36
TRERF1-202ENST00000354325 PHC3Q8NDX5 983 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 ARHGEF1Q92888 912 aaKnown RBP12.82□□□□□ -0.36
TRERF1-202ENST00000354325 ST6GALNAC4Q9H4F1 302 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 DHX33Q9H6R0 707 aaKnown RBP12.82□□□□□ -0.36
TRERF1-202ENST00000354325 MRPL40Q9NQ50 206 aaKnown RBP12.82□□□□□ -0.36
TRERF1-202ENST00000354325 SLC17A7Q9P2U7 560 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 GRID1Q9ULK0 1009 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 ARHGAP26Q9UNA1 814 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 GOLGA8SH3BPF8 625 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 GOLGA8MH3BSY2 632 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 BASP1P80723 227 aaKnown RBP12.82□□□□□ -0.36
TRERF1-202ENST00000354325 CHI3L2Q15782 390 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 AHI1Q8N157 1196 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 CPA5Q8WXQ8 436 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 SRPK1Q96SB4 655 aaKnown RBP12.82□□□□□ -0.36
TRERF1-202ENST00000354325 EPS15L1Q9UBC2 864 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 XPO7Q9UIA9 1087 aaKnown RBP12.82□□□□□ -0.36
TRERF1-202ENST00000354325 LAMB2P55268 1798 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 CLUHO75153 1309 aa12.82□□□□□ -0.36
TRERF1-202ENST00000354325 hCG_2014768A0A024R1R8 64 aa12.81□□□□□ -0.36
TRERF1-202ENST00000354325 CCNT2O60583 730 aaKnown RBP12.81□□□□□ -0.36
TRERF1-202ENST00000354325 ATP6V1G1O75348 118 aa12.81□□□□□ -0.36
TRERF1-202ENST00000354325 WEE2P0C1S8 567 aa12.81□□□□□ -0.36
TRERF1-202ENST00000354325 FDX1P10109 184 aa12.81□□□□□ -0.36
TRERF1-202ENST00000354325 CNTFP26441 200 aa12.81□□□□□ -0.36
TRERF1-202ENST00000354325 GCAP28676 217 aa12.81□□□□□ -0.36
TRERF1-202ENST00000354325 FOLH1Q04609 750 aa12.81□□□□□ -0.36
TRERF1-202ENST00000354325 GRAMD4Q6IC98 578 aa12.81□□□□□ -0.36
TRERF1-202ENST00000354325 SLITRK1Q96PX8 696 aa12.81□□□□□ -0.36
TRERF1-202ENST00000354325 KLF6Q99612 283 aaPredicted RBP12.81□□□□□ -0.36
TRERF1-202ENST00000354325 TBC1D23Q9NUY8 699 aa12.81□□□□□ -0.36
TRERF1-202ENST00000354325 PADI4Q9UM07 663 aa12.81□□□□□ -0.36
TRERF1-202ENST00000354325 PCDHB4Q9Y5E5 795 aa12.81□□□□□ -0.36
TRERF1-202ENST00000354325 SNCAIPQ9Y6H5 919 aa12.81□□□□□ -0.36
TRERF1-202ENST00000354325 AK5Q9Y6K8 562 aa12.81□□□□□ -0.36
TRERF1-202ENST00000354325 KIF13AQ9H1H9 1805 aa12.81□□□□□ -0.36
TRERF1-202ENST00000354325 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.81□□□□□ -0.36
TRERF1-202ENST00000354325 TRDMT1O14717 391 aaKnown RBP12.81□□□□□ -0.36
TRERF1-202ENST00000354325 RNASEH1O60930 286 aaKnown RBP12.81□□□□□ -0.36
TRERF1-202ENST00000354325 NOL3O60936 208 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms