RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 HSPH1Q92598 858 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 CCT8L2Q96SF2 557 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 NT5C1AQ9BXI3 368 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 NRCAMQ92823 1304 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 CST8O60676 142 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 RECQL4O94761 1208 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 IFNB1P01574 187 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 DARSP14868 501 aaKnown RBP16.36■□□□□ 0.21
MBD1-205ENST00000353909 CREB1P16220 341 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 GABRB2P47870 512 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 NRLP54845 237 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 GDF10P55107 478 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 ZBTB6Q15916 424 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 PMF1Q6P1K2 205 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 FAM183BPQ6ZVS7 135 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 TRMT10CQ7L0Y3 403 aaKnown RBP16.36■□□□□ 0.21
MBD1-205ENST00000353909 NLRP14Q86W24 1093 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 TTC30AQ86WT1 665 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 TAB3Q8N5C8 712 aaPredicted RBP16.36■□□□□ 0.21
MBD1-205ENST00000353909 ACTL9Q8TC94 416 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 DPEP3Q9H4B8 488 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 GOLGA2P5Q9HBQ8 144 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 NINJ2Q9NZG7 142 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 MBLAC1A4D2B0 266 aaPredicted RBP16.35■□□□□ 0.21
MBD1-205ENST00000353909 RRN3P2A6NIE6 340 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 TRIM66O15016 1216 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 TTC4O95801 387 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 KDELR1P24390 212 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 MFSD10Q14728 455 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 KYAT1Q16773 422 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 CDO1Q16878 200 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 GOLGA7BQ2TAP0 167 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 HIBCHQ6NVY1 386 aaPredicted RBP16.35■□□□□ 0.21
MBD1-205ENST00000353909 POLNQ7Z5Q5 900 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 ALLCQ8N6M5 410 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 MYCBPAPQ8TBZ2 947 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 FNIP1Q8TF40 1166 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 FAXDC2Q96IV6 333 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 DDX56Q9NY93 547 aaKnown RBP16.35■□□□□ 0.21
MBD1-205ENST00000353909 GABBR2O75899 941 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 ADAM17P78536 824 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 OTUD4Q01804 1114 aaKnown RBP16.35■□□□□ 0.21
MBD1-205ENST00000353909 GPS1Q13098 491 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 MMRN1Q13201 1228 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 DCAF4L1Q3SXM0 396 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 ZNF618Q5T7W0 954 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 OR6B2Q6IFH4 312 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 LCLAT1Q6UWP7 414 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 B3GNT5Q9BYG0 378 aa16.35■□□□□ 0.21
MBD1-205ENST00000353909 PIN4Q9Y237 131 aaKnown RBP16.35■□□□□ 0.21
MBD1-205ENST00000353909 VCPP55072 806 aaKnown RBP16.34■□□□□ 0.21
MBD1-205ENST00000353909 COPS2P61201 443 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 GAD2Q05329 585 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 FASTKD3Q14CZ7 662 aaKnown RBP16.34■□□□□ 0.21
MBD1-205ENST00000353909 SESTD1Q86VW0 696 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 SCUBE3Q8IX30 993 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 ZNF473Q8WTR7 871 aaKnown RBP16.34■□□□□ 0.21
MBD1-205ENST00000353909 SELENOSQ9BQE4 189 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 TRIM6Q9C030 488 aaPredicted RBP16.34■□□□□ 0.21
MBD1-205ENST00000353909 WDR35Q9P2L0 1181 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 A6NNZ2 444 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 SPTLC1O15269 473 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 MYL3P08590 195 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 ATP11AP98196 1134 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 MYO1EQ12965 1108 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 SNX17Q15036 470 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 TAF1CQ15572 869 aaPredicted RBP16.34■□□□□ 0.21
MBD1-205ENST00000353909 SOWAHAQ2M3V2 549 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 TUBB8Q3ZCM7 444 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 C6orf118Q5T5N4 469 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 NOTUMQ6P988 496 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 CYP4V2Q6ZWL3 525 aaPredicted RBP16.34■□□□□ 0.21
MBD1-205ENST00000353909 SLC35B2Q8TB61 432 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 RXFP2Q8WXD0 754 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 FAM129AQ9BZQ8 928 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 USP18Q9UMW8 372 aa16.34■□□□□ 0.21
MBD1-205ENST00000353909 SMIM35A0A1B0GVV1 85 aa16.33■□□□□ 0.21
MBD1-205ENST00000353909 SGK1O00141 431 aa16.33■□□□□ 0.21
MBD1-205ENST00000353909 STAU1O95793 577 aaKnown RBP16.33■□□□□ 0.21
MBD1-205ENST00000353909 CHN1P15882 459 aa16.33■□□□□ 0.21
MBD1-205ENST00000353909 PECAM1P16284 738 aaPredicted RBP16.33■□□□□ 0.21
MBD1-205ENST00000353909 IGFBP6P24592 240 aaPredicted RBP16.33■□□□□ 0.21
MBD1-205ENST00000353909 PTPN7P35236 360 aa16.33■□□□□ 0.21
MBD1-205ENST00000353909 GSCP56915 257 aaPredicted RBP16.33■□□□□ 0.21
MBD1-205ENST00000353909 MTM1Q13496 603 aa16.33■□□□□ 0.21
MBD1-205ENST00000353909 QPCTQ16769 361 aa16.33■□□□□ 0.21
MBD1-205ENST00000353909 CYP4F22Q6NT55 531 aa16.33■□□□□ 0.21
MBD1-205ENST00000353909 DRICH1Q6PGQ1 229 aaPredicted RBP16.33■□□□□ 0.21
MBD1-205ENST00000353909 ALKAL1Q6UXT8 129 aa16.33■□□□□ 0.21
MBD1-205ENST00000353909 CFAP57Q96MR6 1250 aa16.33■□□□□ 0.21
MBD1-205ENST00000353909 RBM15Q96T37 977 aaKnown RBP eCLIP16.33■□□□□ 0.21
MBD1-205ENST00000353909 TMEM109Q9BVC6 243 aa16.33■□□□□ 0.21
MBD1-205ENST00000353909 CALN1Q9BXU9 219 aa16.33■□□□□ 0.21
MBD1-205ENST00000353909 NMRK2Q9NPI5 230 aa16.33■□□□□ 0.21
MBD1-205ENST00000353909 EBAG9O00559 213 aa16.33■□□□□ 0.2
MBD1-205ENST00000353909 TRAPPC3O43617 180 aa16.33■□□□□ 0.2
MBD1-205ENST00000353909 PDGFRBP09619 1106 aa16.33■□□□□ 0.2
MBD1-205ENST00000353909 PDGFRAP16234 1089 aa16.33■□□□□ 0.2
MBD1-205ENST00000353909 LMO2P25791 158 aa16.33■□□□□ 0.2
MBD1-205ENST00000353909 MMP13P45452 471 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms