RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 TCP1P17987 556 aaKnown RBP8.79□□□□□ -1
CD44-205ENST00000352818 ATP4AP20648 1035 aa8.79□□□□□ -1
CD44-205ENST00000352818 ADSSP30520 456 aa8.79□□□□□ -1
CD44-205ENST00000352818 ARL2P36404 184 aa8.79□□□□□ -1
CD44-205ENST00000352818 NAMPTP43490 491 aa8.79□□□□□ -1
CD44-205ENST00000352818 POLGP54098 1239 aaPredicted RBP8.79□□□□□ -1
CD44-205ENST00000352818 IGBP1P78318 339 aa8.79□□□□□ -1
CD44-205ENST00000352818 SCAPQ12770 1279 aa8.79□□□□□ -1
CD44-205ENST00000352818 SNRNP35Q16560 246 aaKnown RBP8.79□□□□□ -1
CD44-205ENST00000352818 IFI16Q16666 785 aaKnown RBP8.79□□□□□ -1
CD44-205ENST00000352818 POTEHQ6S545 545 aa8.79□□□□□ -1
CD44-205ENST00000352818 ZNF571Q7Z3V5 609 aaPredicted RBP8.79□□□□□ -1
CD44-205ENST00000352818 DDX53Q86TM3 631 aaKnown RBP8.79□□□□□ -1
CD44-205ENST00000352818 CTAGE6Q86UF2 777 aa8.79□□□□□ -1
CD44-205ENST00000352818 CTAGE4Q8IX94 777 aa8.79□□□□□ -1
CD44-205ENST00000352818 ZNF843Q8N446 348 aa8.79□□□□□ -1
CD44-205ENST00000352818 OLIG1Q8TAK6 271 aa8.79□□□□□ -1
CD44-205ENST00000352818 TRAPPC12Q8WVT3 735 aa8.79□□□□□ -1
CD44-205ENST00000352818 SEPT1Q8WYJ6 367 aa8.79□□□□□ -1
CD44-205ENST00000352818 SMG7Q92540 1137 aaKnown RBP8.79□□□□□ -1
CD44-205ENST00000352818 NELL2Q99435 816 aa8.79□□□□□ -1
CD44-205ENST00000352818 GPR88Q9GZN0 384 aa8.79□□□□□ -1
CD44-205ENST00000352818 TMEM134Q9H6X4 195 aa8.79□□□□□ -1
CD44-205ENST00000352818 KIAA1586Q9HCI6 787 aa8.79□□□□□ -1
CD44-205ENST00000352818 NRBP2Q9NSY0 501 aa8.79□□□□□ -1
CD44-205ENST00000352818 DNAJC12Q9UKB3 198 aa8.79□□□□□ -1
CD44-205ENST00000352818 RAB21Q9UL25 225 aa8.79□□□□□ -1
CD44-205ENST00000352818 HYOU1Q9Y4L1 999 aa8.79□□□□□ -1
CD44-205ENST00000352818 CAPN6Q9Y6Q1 641 aa8.79□□□□□ -1
CD44-205ENST00000352818 NOTCH2Q04721 2471 aa8.79□□□□□ -1
CD44-205ENST00000352818 NCANO14594 1321 aa8.79□□□□□ -1
CD44-205ENST00000352818 MACROD2A1Z1Q3 448 aa8.78□□□□□ -1
CD44-205ENST00000352818 TISP43B9A030 160 aa8.78□□□□□ -1
CD44-205ENST00000352818 ANKRD63C9JTQ0 380 aa8.78□□□□□ -1
CD44-205ENST00000352818 CES2O00748 559 aa8.78□□□□□ -1
CD44-205ENST00000352818 ZC3H11AO75152 810 aaKnown RBP eCLIP8.78□□□□□ -1
CD44-205ENST00000352818 ADRB2P07550 413 aa8.78□□□□□ -1
CD44-205ENST00000352818 INSRRP14616 1297 aa8.78□□□□□ -1
CD44-205ENST00000352818 CSRP1P21291 193 aaKnown RBP8.78□□□□□ -1
CD44-205ENST00000352818 KLRC2P26717 231 aa8.78□□□□□ -1
CD44-205ENST00000352818 CNR2P34972 360 aa8.78□□□□□ -1
CD44-205ENST00000352818 MXI1P50539 228 aa8.78□□□□□ -1
CD44-205ENST00000352818 CLDN10P78369 228 aa8.78□□□□□ -1
CD44-205ENST00000352818 SP4Q02446 784 aa8.78□□□□□ -1
CD44-205ENST00000352818 PTK2Q05397 1052 aa8.78□□□□□ -1
CD44-205ENST00000352818 CYP24A1Q07973 514 aa8.78□□□□□ -1
CD44-205ENST00000352818 DRAP1Q14919 205 aaPredicted RBP8.78□□□□□ -1
CD44-205ENST00000352818 BRD3Q15059 726 aa8.78□□□□□ -1
CD44-205ENST00000352818 MTERF2Q49AM1 385 aa8.78□□□□□ -1
CD44-205ENST00000352818 WDR44Q5JSH3 913 aa8.78□□□□□ -1
CD44-205ENST00000352818 TEX35Q5T0J7 233 aa8.78□□□□□ -1
CD44-205ENST00000352818 HEATR6Q6AI08 1181 aaKnown RBP8.78□□□□□ -1
CD44-205ENST00000352818 SLC39A4Q6P5W5 647 aa8.78□□□□□ -1
CD44-205ENST00000352818 TAS1R3Q7RTX0 852 aa8.78□□□□□ -1
CD44-205ENST00000352818 KBTBD6Q86V97 674 aa8.78□□□□□ -1
CD44-205ENST00000352818 FAM228AQ86W67 206 aa8.78□□□□□ -1
CD44-205ENST00000352818 LONP2Q86WA8 852 aa8.78□□□□□ -1
CD44-205ENST00000352818 GPD1LQ8N335 351 aa8.78□□□□□ -1
CD44-205ENST00000352818 SLC30A5Q8TAD4 765 aa8.78□□□□□ -1
CD44-205ENST00000352818 PLEKHO2Q8TD55 490 aa8.78□□□□□ -1
CD44-205ENST00000352818 PARD3BQ8TEW8 1205 aa8.78□□□□□ -1
CD44-205ENST00000352818 SLC7A3Q8WY07 619 aa8.78□□□□□ -1
CD44-205ENST00000352818 TMEM169Q96HH4 297 aa8.78□□□□□ -1
CD44-205ENST00000352818 IGSF21Q96ID5 467 aa8.78□□□□□ -1
CD44-205ENST00000352818 CALR3Q96L12 384 aaKnown RBP8.78□□□□□ -1
CD44-205ENST00000352818 FAM81BQ96LP2 452 aa8.78□□□□□ -1
CD44-205ENST00000352818 PCYT2Q99447 389 aa8.78□□□□□ -1
CD44-205ENST00000352818 SH2D3AQ9BRG2 576 aa8.78□□□□□ -1
CD44-205ENST00000352818 PCIF1Q9H4Z3 704 aa8.78□□□□□ -1
CD44-205ENST00000352818 TMEM8AQ9HCN3 771 aa8.78□□□□□ -1
CD44-205ENST00000352818 HEBP1Q9NRV9 189 aa8.78□□□□□ -1
CD44-205ENST00000352818 RNF14Q9UBS8 474 aa8.78□□□□□ -1
CD44-205ENST00000352818 NAGPAQ9UK23 515 aa8.78□□□□□ -1
CD44-205ENST00000352818 TFR2Q9UP52 801 aa8.78□□□□□ -1
CD44-205ENST00000352818 RAXQ9Y2V3 346 aa8.78□□□□□ -1
CD44-205ENST00000352818 DUSP10Q9Y6W6 482 aa8.78□□□□□ -1
CD44-205ENST00000352818 CCDC151A5D8V7 595 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 SPDYE4A6NLX3 237 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 J3QKU1 62 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 DDX3XO00571 662 aaKnown RBP eCLIP8.77□□□□□ -1.01
CD44-205ENST00000352818 HNRNPDLO14979 420 aaKnown RBP8.77□□□□□ -1.01
CD44-205ENST00000352818 NCAM2O15394 837 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 EXTL3O43909 919 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 MAFO75444 373 aaPredicted RBP8.77□□□□□ -1.01
CD44-205ENST00000352818 RPS6KA5O75582 802 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 MOCS3O95396 460 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 ZSCAN20P17040 1043 aaPredicted RBP8.77□□□□□ -1.01
CD44-205ENST00000352818 GLRA2P23416 452 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 SLC26A2P50443 739 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 GPC3P51654 580 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 CCR3P51677 355 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 STAT5BP51692 787 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 CLCN6P51797 869 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 DLG4P78352 724 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 PPP3CAQ08209 521 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 TCEAL1Q15170 157 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 KRT39Q6A163 491 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 SLFN12LQ6IEE8 588 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 ALKBH5Q6P6C2 394 aaKnown RBP8.77□□□□□ -1.01
CD44-205ENST00000352818 GJB7Q6PEY0 223 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms