RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 GDF10P55107 478 aa23.23■■□□□ 1.31
UPF3A-201ENST00000351487 DYNLT1P63172 113 aa23.23■■□□□ 1.31
UPF3A-201ENST00000351487 IL9RQ01113 521 aa23.23■■□□□ 1.31
UPF3A-201ENST00000351487 PPIL2Q13356 520 aa23.23■■□□□ 1.31
UPF3A-201ENST00000351487 EMC1Q8N766 993 aa23.23■■□□□ 1.31
UPF3A-201ENST00000351487 GBP7Q8N8V2 638 aaPredicted RBP23.23■■□□□ 1.31
UPF3A-201ENST00000351487 VPS37BQ9H9H4 285 aa23.23■■□□□ 1.31
UPF3A-201ENST00000351487 SAE1Q9UBE0 346 aaPredicted RBP23.23■■□□□ 1.31
UPF3A-201ENST00000351487 DDNO94850 711 aaPredicted RBP23.23■■□□□ 1.31
UPF3A-201ENST00000351487 HMGCRP04035 888 aa23.23■■□□□ 1.31
UPF3A-201ENST00000351487 TAC1P20366 129 aa23.23■■□□□ 1.31
UPF3A-201ENST00000351487 MNAT1P51948 309 aa23.23■■□□□ 1.31
UPF3A-201ENST00000351487 WDR4P57081 412 aaKnown RBP23.23■■□□□ 1.31
UPF3A-201ENST00000351487 GALNTL6Q49A17 601 aa23.23■■□□□ 1.31
UPF3A-201ENST00000351487 NAT8LQ8N9F0 302 aa23.23■■□□□ 1.31
UPF3A-201ENST00000351487 CPT1BQ92523 772 aa23.23■■□□□ 1.31
UPF3A-201ENST00000351487 GRAMD1AQ96CP6 724 aa23.23■■□□□ 1.31
UPF3A-201ENST00000351487 PDZD7Q9H5P4 517 aa23.23■■□□□ 1.31
UPF3A-201ENST00000351487 PDGFCQ9NRA1 345 aa23.23■■□□□ 1.31
UPF3A-201ENST00000351487 APOC4-APOC2K7ER74 178 aa23.22■■□□□ 1.31
UPF3A-201ENST00000351487 ASMTLO95671 621 aa23.22■■□□□ 1.31
UPF3A-201ENST00000351487 APOC2P02655 101 aa23.22■■□□□ 1.31
UPF3A-201ENST00000351487 P4HA1P13674 534 aa23.22■■□□□ 1.31
UPF3A-201ENST00000351487 GPD2P43304 727 aa23.22■■□□□ 1.31
UPF3A-201ENST00000351487 PSMC4P43686 418 aa23.22■■□□□ 1.31
UPF3A-201ENST00000351487 ORC1Q13415 861 aa23.22■■□□□ 1.31
UPF3A-201ENST00000351487 MTFR1Q15390 333 aa23.22■■□□□ 1.31
UPF3A-201ENST00000351487 EFHC2Q5JST6 749 aa23.22■■□□□ 1.31
UPF3A-201ENST00000351487 CGB2Q6NT52 195 aa23.22■■□□□ 1.31
UPF3A-201ENST00000351487 DENND1AQ8TEH3 1009 aa23.22■■□□□ 1.31
UPF3A-201ENST00000351487 FAM124BQ9H5Z6 455 aaPredicted RBP23.22■■□□□ 1.31
UPF3A-201ENST00000351487 SMG5Q9UPR3 1016 aaKnown RBP23.22■■□□□ 1.31
UPF3A-201ENST00000351487 CITO14578 2027 aa23.22■■□□□ 1.31
UPF3A-201ENST00000351487 POC1B-GALNT4F8VUJ3 575 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 SMAPO00193 183 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 VDRP11473 427 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 MIPP30301 263 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 RDXP35241 583 aaKnown RBP23.21■■□□□ 1.31
UPF3A-201ENST00000351487 KYAT1Q16773 422 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 PARP9Q8IXQ6 854 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 TRABDQ9H4I3 376 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 CLUHO75153 1309 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 ASB14A6NK59 587 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 E7ESA3 106 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 M0QYV0 167 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 MAGEB2O15479 319 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 RNF8O76064 485 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 UBOX5O94941 541 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 CD48P09326 243 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 INSRRP14616 1297 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 PCK1P35558 622 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 ARHGAP1Q07960 439 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 INCA1Q0VD86 236 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 ZKSCAN8Q15776 578 aaPredicted RBP23.21■■□□□ 1.31
UPF3A-201ENST00000351487 HP1BP3Q5SSJ5 553 aaPredicted RBP23.21■■□□□ 1.31
UPF3A-201ENST00000351487 RGS9BPQ6ZS82 235 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 TMEM130Q8N3G9 435 aa23.21■■□□□ 1.31
UPF3A-201ENST00000351487 PSMC3IPQ9P2W1 217 aaPredicted RBP23.21■■□□□ 1.31
UPF3A-201ENST00000351487 A0A087WZ62 844 aa23.2■■□□□ 1.3
UPF3A-201ENST00000351487 CFAP73A6NFT4 308 aa23.2■■□□□ 1.3
UPF3A-201ENST00000351487 MGRN1O60291 552 aa23.2■■□□□ 1.3
UPF3A-201ENST00000351487 OSBPP22059 807 aa23.2■■□□□ 1.3
UPF3A-201ENST00000351487 FOXN2P32314 431 aa23.2■■□□□ 1.3
UPF3A-201ENST00000351487 ARL4CP56559 192 aa23.2■■□□□ 1.3
UPF3A-201ENST00000351487 GPX6P59796 221 aa23.2■■□□□ 1.3
UPF3A-201ENST00000351487 ADCY1Q08828 1119 aa23.2■■□□□ 1.3
UPF3A-201ENST00000351487 PKN2Q16513 984 aaKnown RBP23.2■■□□□ 1.3
UPF3A-201ENST00000351487 RSAD2Q8WXG1 361 aa23.2■■□□□ 1.3
UPF3A-201ENST00000351487 FDXACB1Q9BRP7 624 aaPredicted RBP23.2■■□□□ 1.3
UPF3A-201ENST00000351487 USP18Q9UMW8 372 aa23.2■■□□□ 1.3
UPF3A-201ENST00000351487 CHUKO15111 745 aa23.2■■□□□ 1.3
UPF3A-201ENST00000351487 STAU1O95793 577 aaKnown RBP23.2■■□□□ 1.3
UPF3A-201ENST00000351487 TRUB2O95900 331 aaKnown RBP23.2■■□□□ 1.3
UPF3A-201ENST00000351487 LGALS2P05162 132 aa23.2■■□□□ 1.3
UPF3A-201ENST00000351487 RPL22P35268 128 aaKnown RBP23.2■■□□□ 1.3
UPF3A-201ENST00000351487 ACVR2BQ13705 512 aa23.2■■□□□ 1.3
UPF3A-201ENST00000351487 R3HDM1Q15032 1099 aaKnown RBP23.2■■□□□ 1.3
UPF3A-201ENST00000351487 SLC10A6Q3KNW5 377 aa23.2■■□□□ 1.3
UPF3A-201ENST00000351487 FAM133BQ5BKY9 247 aaKnown RBP23.2■■□□□ 1.3
UPF3A-201ENST00000351487 ANKRD22Q5VYY1 191 aa23.2■■□□□ 1.3
UPF3A-201ENST00000351487 ATP11CQ8NB49 1132 aa23.2■■□□□ 1.3
UPF3A-201ENST00000351487 KCTD6Q8NC69 237 aa23.2■■□□□ 1.3
UPF3A-201ENST00000351487 SHCBP1Q8NEM2 672 aa23.2■■□□□ 1.3
UPF3A-201ENST00000351487 ASNSD1Q9NWL6 643 aa23.2■■□□□ 1.3
UPF3A-201ENST00000351487 ZMYND8Q9ULU4 1186 aaPredicted RBP23.2■■□□□ 1.3
UPF3A-201ENST00000351487 ENDOD1O94919 500 aa23.19■■□□□ 1.3
UPF3A-201ENST00000351487 KRT15P19012 456 aa23.19■■□□□ 1.3
UPF3A-201ENST00000351487 ZNF143P52747 638 aaPredicted RBP23.19■■□□□ 1.3
UPF3A-201ENST00000351487 IGBP1P78318 339 aa23.19■■□□□ 1.3
UPF3A-201ENST00000351487 SNCBQ16143 134 aa23.19■■□□□ 1.3
UPF3A-201ENST00000351487 RNF43Q68DV7 783 aa23.19■■□□□ 1.3
UPF3A-201ENST00000351487 FASTKD5Q7L8L6 764 aaKnown RBP23.19■■□□□ 1.3
UPF3A-201ENST00000351487 CCDC125Q86Z20 511 aa23.19■■□□□ 1.3
UPF3A-201ENST00000351487 CCDC63Q8NA47 563 aa23.19■■□□□ 1.3
UPF3A-201ENST00000351487 HPDLQ96IR7 371 aa23.19■■□□□ 1.3
UPF3A-201ENST00000351487 SMC6Q96SB8 1091 aa23.19■■□□□ 1.3
UPF3A-201ENST00000351487 RSAD1Q9HA92 442 aa23.19■■□□□ 1.3
UPF3A-201ENST00000351487 PCSK1NQ9UHG2 260 aa23.19■■□□□ 1.3
UPF3A-201ENST00000351487 ARF4P18085 180 aaPredicted RBP23.18■■□□□ 1.3
UPF3A-201ENST00000351487 PHBP35232 272 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms