RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 NT5C1AQ9BXI3 368 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 SIK2Q9H0K1 926 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 NAALADL1Q9UQQ1 740 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 COL11A1P12107 1806 aaPredicted RBP10.91□□□□□ -0.66
SMPD4-201ENST00000351288 A6NNZ2 444 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 ABCD1P33897 745 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 HADHBP55084 474 aaKnown RBP10.91□□□□□ -0.66
SMPD4-201ENST00000351288 TUBB8Q3ZCM7 444 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 ZPBP2Q6X784 338 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 SCN4BQ8IWT1 228 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 JOSD2Q8TAC2 188 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 NDRG1Q92597 394 aaKnown RBP10.91□□□□□ -0.66
SMPD4-201ENST00000351288 B3GNT5Q9BYG0 378 aa10.91□□□□□ -0.66
SMPD4-201ENST00000351288 CASTOR2A6NHX0 329 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 RASA4BC9J798 803 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 RASA4O43374 803 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 TTC4O95801 387 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 GJA5P36382 358 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 RNASELQ05823 741 aaKnown RBP10.9□□□□□ -0.66
SMPD4-201ENST00000351288 VSTM1Q6UX27 236 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 KDELC2Q7Z4H8 507 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 SIX6OS1Q8N1H7 587 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 ATL2Q8NHH9 583 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 PPP1R14CQ8TAE6 165 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 LPPQ93052 612 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 PGM2Q96G03 612 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 ABHD16BQ9H3Z7 469 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 SLCO1B3Q9NPD5 702 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 PDLIM7Q9NR12 457 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 TSPAN16Q9UKR8 245 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 CEP290O15078 2479 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 A8MUI8 341 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 MSCO60682 206 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 RECQL4O94761 1208 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 UBOX5O94941 541 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 SMPD1P17405 629 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 ZNF252P-AS1Q0IIN9 211 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 PRCCQ92733 491 aaPredicted RBP10.9□□□□□ -0.66
SMPD4-201ENST00000351288 ZFP42Q96MM3 310 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 EVPLQ92817 2033 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 E5RJQ4 531 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 ZBED1O96006 694 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 POMCP01189 267 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 RPSAP08865 295 aaKnown RBP10.9□□□□□ -0.66
SMPD4-201ENST00000351288 RBP3P10745 1247 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 PECAM1P16284 738 aaPredicted RBP10.9□□□□□ -0.66
SMPD4-201ENST00000351288 DRG2P55039 364 aaKnown RBP10.9□□□□□ -0.66
SMPD4-201ENST00000351288 BCAR1P56945 870 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 EIF3EP60228 445 aaKnown RBP10.9□□□□□ -0.66
SMPD4-201ENST00000351288 CENPCQ03188 943 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 DNAJC3Q13217 504 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 SH3PXD2AQ5TCZ1 1133 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 TRIM72Q6ZMU5 477 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 SPATA18Q8TC71 538 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 PYROXD1Q8WU10 500 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 P3H4Q92791 437 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 RBM41Q96IZ5 413 aaKnown RBP10.9□□□□□ -0.66
SMPD4-201ENST00000351288 AGAP3Q96P47 875 aa10.9□□□□□ -0.66
SMPD4-201ENST00000351288 EIF2AQ9BY44 585 aaKnown RBP10.9□□□□□ -0.66
SMPD4-201ENST00000351288 E2F8A0AVK6 867 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 ASAP2O43150 1006 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 TREHO43280 583 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 MTA2O94776 668 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 MOCS2O96007 188 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-201ENST00000351288 ASS1P00966 412 aaKnown RBP10.89□□□□□ -0.67
SMPD4-201ENST00000351288 AGTP01019 485 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 CCDC130P13994 396 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 GDF10P55107 478 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 KCNJ2P63252 427 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 SLC20A2Q08357 652 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 MMRN1Q13201 1228 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 CYP1B1Q16678 543 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 DCAF6Q58WW2 860 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 EMC10Q5UCC4 262 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 C15orf39Q6ZRI6 1047 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 FAM131BQ86XD5 332 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 C1orf127Q8N9H9 656 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 ACTL9Q8TC94 416 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 CCT6BQ92526 530 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 CNOT10Q9H9A5 744 aaKnown RBP10.89□□□□□ -0.67
SMPD4-201ENST00000351288 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.89□□□□□ -0.672e-6■□□□□ 11
SMPD4-201ENST00000351288 FER1L6Q2WGJ9 1857 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 CCT8L1PA6NM43 557 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 FSBPO95073 299 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 SSTR1P30872 391 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 THPOP40225 353 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 ZNF484Q5JVG2 852 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 HHATQ5VTY9 493 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 CYB5D1Q6P9G0 228 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 CNPY4Q8N129 248 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 ANKS4BQ8N8V4 417 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 RXFP2Q8WXD0 754 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 FAF2Q96CS3 445 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 TMEM176AQ96HP8 235 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 CFAP57Q96MR6 1250 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 TGS1Q96RS0 853 aaKnown RBP10.89□□□□□ -0.67
SMPD4-201ENST00000351288 CDHR5Q9HBB8 845 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 NEU2Q9Y3R4 380 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 L3MBTL1Q9Y468 752 aa10.89□□□□□ -0.67
SMPD4-201ENST00000351288 PPEF2O14830 753 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms