RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 SP3Q02447 781 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 PTK6Q13882 451 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 KCNA10Q16322 511 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 TRIM71Q2Q1W2 868 aaKnown RBP7.29□□□□□ -1.24
TRIM55-203ENST00000350034 GOLGA7BQ2TAP0 167 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 SV2CQ496J9 727 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 CFAP58Q5T655 872 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 PPP1R26Q5T8A7 1209 aaPredicted RBP7.29□□□□□ -1.24
TRIM55-203ENST00000350034 TXNRD3NBQ6F5E7 133 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 TRNP1Q6NT89 227 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 RHBDF2Q6PJF5 856 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 MFSD7Q6UXD7 560 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 SPOCD1Q6ZMY3 1216 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 TMC3Q7Z5M5 1100 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 ACOT1Q86TX2 421 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 TOP6BLQ8N6T0 577 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 CMASQ8NFW8 434 aaPredicted RBP7.29□□□□□ -1.24
TRIM55-203ENST00000350034 ATL2Q8NHH9 583 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 UBA3Q8TBC4 463 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 IPO4Q8TEX9 1081 aaKnown RBP7.29□□□□□ -1.24
TRIM55-203ENST00000350034 C1orf54Q8WWF1 131 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 RIN2Q8WYP3 895 aaPredicted RBP7.29□□□□□ -1.24
TRIM55-203ENST00000350034 RAPGEF5Q92565 580 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 KHSRPQ92945 711 aaKnown RBP eCLIP7.29□□□□□ -1.24
TRIM55-203ENST00000350034 ART4Q93070 314 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 EXOC4Q96A65 974 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 RNF25Q96BH1 459 aaPredicted RBP7.29□□□□□ -1.24
TRIM55-203ENST00000350034 ZIM3Q96PE6 472 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 BEGAINQ9BUH8 593 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 APOL6Q9BWW8 343 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 DPH5Q9H2P9 285 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 EPB41L4BQ9H329 900 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 CYLDQ9NQC7 956 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 XPNPEP3Q9NQH7 507 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 METTL5Q9NRN9 209 aaKnown RBP7.29□□□□□ -1.24
TRIM55-203ENST00000350034 FAM105AQ9NUU6 356 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 PSD3Q9NYI0 1048 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 KLK14Q9P0G3 267 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 WHRNQ9P202 907 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 PARP2Q9UGN5 583 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 SRRDQ9UH36 339 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 FEZ2Q9UHY8 353 aaPredicted RBP7.29□□□□□ -1.24
TRIM55-203ENST00000350034 ST3GAL5Q9UNP4 418 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 USTQ9Y2C2 406 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 SNX24Q9Y343 169 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 GOLGA8KD6RF30 607 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 E5RJQ4 531 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 GABRDO14764 452 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 GPR182O15218 404 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 AOC2O75106 756 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 RPS6KA5O75582 802 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 CABYRO75952 493 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 ASGR1P07306 291 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 KRT7P08729 469 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 PRKAR2AP13861 404 aaKnown RBP7.28□□□□□ -1.24
TRIM55-203ENST00000350034 ARSEP51690 589 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 LILRA4P59901 499 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 ADCY2Q08462 1091 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 PTK7Q13308 1070 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 MTMR3Q13615 1198 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 HADHQ16836 314 aaKnown RBP7.28□□□□□ -1.24
TRIM55-203ENST00000350034 EMC10Q5UCC4 262 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 TWF2Q6IBS0 349 aaKnown RBP7.28□□□□□ -1.24
TRIM55-203ENST00000350034 PMF1Q6P1K2 205 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 OLFML1Q6UWY5 402 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 FAM183BPQ6ZVS7 135 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 CYP4V2Q6ZWL3 525 aaPredicted RBP7.28□□□□□ -1.24
TRIM55-203ENST00000350034 ARCQ7LC44 396 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 OSTM1Q86WC4 334 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 ZDHHC17Q8IUH5 632 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 CCDC105Q8IYK2 499 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 EMC1Q8N766 993 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 C12orf29Q8N999 325 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 ANKRD52Q8NB46 1076 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 PCSK9Q8NBP7 692 aaKnown RBP7.28□□□□□ -1.24
TRIM55-203ENST00000350034 OR6B3Q8NGW1 331 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 SLC35B2Q8TB61 432 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 FBXO25Q8TCJ0 367 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 GRK7Q8WTQ7 553 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 ATG4AQ8WYN0 398 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 NKD2Q969F2 451 aaPredicted RBP7.28□□□□□ -1.24
TRIM55-203ENST00000350034 COL26A1Q96A83 441 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 ARL8AQ96BM9 186 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 PKNOX2Q96KN3 472 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 CAPNS2Q96L46 248 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 FMO2Q99518 471 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 CNPY3Q9BT09 278 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 HEMGNQ9BXL5 484 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 OSBPL7Q9BZF2 842 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 TRIM31Q9BZY9 425 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 DPEP3Q9H4B8 488 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 AGO3Q9H9G7 860 aaKnown RBP7.28□□□□□ -1.24
TRIM55-203ENST00000350034 RNF19AQ9NV58 838 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 SLC38A7Q9NVC3 462 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.28□□□□□ -1.24
TRIM55-203ENST00000350034 DDX20Q9UHI6 824 aaKnown RBP7.28□□□□□ -1.24
TRIM55-203ENST00000350034 ADAM21Q9UKJ8 722 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 DRG1Q9Y295 367 aaKnown RBP7.28□□□□□ -1.24
TRIM55-203ENST00000350034 GIT1Q9Y2X7 761 aa7.28□□□□□ -1.24
TRIM55-203ENST00000350034 SQORQ9Y6N5 450 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms