RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 VPS26AO75436 327 aa23.97■■□□□ 1.43
NPAS3-201ENST00000346562 JADE3Q92613 823 aa23.97■■□□□ 1.43
NPAS3-201ENST00000346562 FAR2Q96K12 515 aa23.97■■□□□ 1.43
NPAS3-201ENST00000346562 DYRK1BQ9Y463 629 aa23.97■■□□□ 1.43
NPAS3-201ENST00000346562 USP42Q9H9J4 1324 aaKnown RBP23.97■■□□□ 1.43
NPAS3-201ENST00000346562 ATMINO43313 823 aaPredicted RBP23.97■■□□□ 1.43
NPAS3-201ENST00000346562 C1orf131Q8NDD1 294 aaKnown RBP23.97■■□□□ 1.43
NPAS3-201ENST00000346562 ECSITQ9BQ95 431 aa23.97■■□□□ 1.43
NPAS3-201ENST00000346562 EXOSC4Q9NPD3 245 aaKnown RBP23.97■■□□□ 1.43
NPAS3-201ENST00000346562 CSTF3Q12996 717 aaKnown RBP23.97■■□□□ 1.43
NPAS3-201ENST00000346562 CHI3L2Q15782 390 aa23.97■■□□□ 1.43
NPAS3-201ENST00000346562 KLHDC7AQ5VTJ3 777 aa23.97■■□□□ 1.43
NPAS3-201ENST00000346562 IYDQ6PHW0 289 aa23.97■■□□□ 1.43
NPAS3-201ENST00000346562 GUCA1AP43080 201 aaPredicted RBP23.97■■□□□ 1.43
NPAS3-201ENST00000346562 DEFA1P59665 94 aa23.97■■□□□ 1.43
NPAS3-201ENST00000346562 DEFA3P59666 94 aa23.97■■□□□ 1.43
NPAS3-201ENST00000346562 ACAD10Q6JQN1 1059 aa23.97■■□□□ 1.43
NPAS3-201ENST00000346562 PI4K2AQ9BTU6 479 aa23.97■■□□□ 1.43
NPAS3-201ENST00000346562 IL1RL2Q9HB29 575 aa23.97■■□□□ 1.43
NPAS3-201ENST00000346562 MAP3K13O43283 966 aa23.97■■□□□ 1.43
NPAS3-201ENST00000346562 FMR1Q06787 632 aaKnown RBP eCLIP23.97■■□□□ 1.43
NPAS3-201ENST00000346562 ZNF284Q2VY69 593 aa23.97■■□□□ 1.43
NPAS3-201ENST00000346562 PRPF39Q86UA1 669 aaKnown RBP23.97■■□□□ 1.43
NPAS3-201ENST00000346562 DPP7Q9UHL4 492 aa23.97■■□□□ 1.43
NPAS3-201ENST00000346562 KIAA1257Q9ULG3 409 aa23.97■■□□□ 1.43
NPAS3-201ENST00000346562 ZNF609O15014 1411 aa23.97■■□□□ 1.43
NPAS3-201ENST00000346562 DPEP1P16444 411 aa23.96■■□□□ 1.43
NPAS3-201ENST00000346562 GRK3P35626 688 aa23.96■■□□□ 1.43
NPAS3-201ENST00000346562 VSNL1P62760 191 aa23.96■■□□□ 1.43
NPAS3-201ENST00000346562 TRIP4Q15650 581 aaPredicted RBP23.96■■□□□ 1.43
NPAS3-201ENST00000346562 KIAA2013Q8IYS2 634 aa23.96■■□□□ 1.43
NPAS3-201ENST00000346562 MYO1HQ8N1T3 1032 aa23.96■■□□□ 1.43
NPAS3-201ENST00000346562 TARS2Q9BW92 718 aaKnown RBP23.96■■□□□ 1.43
NPAS3-201ENST00000346562 KLK14Q9P0G3 267 aa23.96■■□□□ 1.43
NPAS3-201ENST00000346562 ALKQ9UM73 1620 aa23.96■■□□□ 1.43
NPAS3-201ENST00000346562 CCDC126Q96EE4 140 aa23.96■■□□□ 1.43
NPAS3-201ENST00000346562 F9P00740 461 aa23.96■■□□□ 1.43
NPAS3-201ENST00000346562 ALDH6A1Q02252 535 aaKnown RBP23.96■■□□□ 1.43
NPAS3-201ENST00000346562 BTKQ06187 659 aa23.96■■□□□ 1.43
NPAS3-201ENST00000346562 STK4Q13043 487 aa23.96■■□□□ 1.43
NPAS3-201ENST00000346562 CDR2LQ86X02 465 aaPredicted RBP23.96■■□□□ 1.43
NPAS3-201ENST00000346562 CHP1Q99653 195 aa23.96■■□□□ 1.43
NPAS3-201ENST00000346562 FAM118BQ9BPY3 351 aa23.96■■□□□ 1.43
NPAS3-201ENST00000346562 CDC16Q13042 620 aa23.96■■□□□ 1.43
NPAS3-201ENST00000346562 FAM9CQ8IZT9 166 aa23.96■■□□□ 1.43
NPAS3-201ENST00000346562 DTX3LQ8TDB6 740 aa23.96■■□□□ 1.43
NPAS3-201ENST00000346562 WDR24Q96S15 920 aa23.96■■□□□ 1.43
NPAS3-201ENST00000346562 UBE2OQ9C0C9 1292 aaKnown RBP23.96■■□□□ 1.43
NPAS3-201ENST00000346562 PRR23AA6NEV1 266 aa23.95■■□□□ 1.43
NPAS3-201ENST00000346562 SLC16A1P53985 500 aa23.95■■□□□ 1.43
NPAS3-201ENST00000346562 CCNJLQ8IV13 435 aa23.95■■□□□ 1.43
NPAS3-201ENST00000346562 DPF2Q92785 391 aa23.95■■□□□ 1.43
NPAS3-201ENST00000346562 GGT7Q9UJ14 662 aa23.95■■□□□ 1.43
NPAS3-201ENST00000346562 CNTNAP5Q8WYK1 1306 aa23.95■■□□□ 1.43
NPAS3-201ENST00000346562 PMPCBO75439 489 aa23.95■■□□□ 1.42
NPAS3-201ENST00000346562 PYGMP11217 842 aa23.95■■□□□ 1.42
NPAS3-201ENST00000346562 TGM2P21980 687 aa23.95■■□□□ 1.42
NPAS3-201ENST00000346562 TBL3Q12788 808 aaKnown RBP23.95■■□□□ 1.42
NPAS3-201ENST00000346562 PCSK9Q8NBP7 692 aaKnown RBP23.95■■□□□ 1.42
NPAS3-201ENST00000346562 ARRDC4Q8NCT1 418 aa23.95■■□□□ 1.42
NPAS3-201ENST00000346562 XPO6Q96QU8 1125 aaKnown RBP23.95■■□□□ 1.42
NPAS3-201ENST00000346562 AGPAT5Q9NUQ2 364 aa23.95■■□□□ 1.42
NPAS3-201ENST00000346562 RASSF9O75901 435 aa23.95■■□□□ 1.42
NPAS3-201ENST00000346562 ERVK-10P10266 1014 aa23.95■■□□□ 1.42
NPAS3-201ENST00000346562 EPHB3P54753 998 aa23.95■■□□□ 1.42
NPAS3-201ENST00000346562 THTPAQ9BU02 230 aa23.95■■□□□ 1.42
NPAS3-201ENST00000346562 FBXO21O94952 628 aa23.95■■□□□ 1.42
NPAS3-201ENST00000346562 TCN1P20061 433 aaPredicted RBP23.95■■□□□ 1.42
NPAS3-201ENST00000346562 STIP1P31948 543 aaKnown RBP23.95■■□□□ 1.42
NPAS3-201ENST00000346562 HOMEZQ8IX15 550 aa23.95■■□□□ 1.42
NPAS3-201ENST00000346562 UBXN6Q9BZV1 441 aa23.95■■□□□ 1.42
NPAS3-201ENST00000346562 TRPM5Q9NZQ8 1165 aa23.95■■□□□ 1.42
NPAS3-201ENST00000346562 VDRP11473 427 aa23.95■■□□□ 1.42
NPAS3-201ENST00000346562 COILP38432 576 aaPredicted RBP23.95■■□□□ 1.42
NPAS3-201ENST00000346562 NR1I3Q14994 352 aa23.95■■□□□ 1.42
NPAS3-201ENST00000346562 PDK2Q15119 407 aa23.95■■□□□ 1.42
NPAS3-201ENST00000346562 DENND5BQ6ZUT9 1274 aa23.95■■□□□ 1.42
NPAS3-201ENST00000346562 C11orf74Q86VG3 221 aa23.95■■□□□ 1.42
NPAS3-201ENST00000346562 TUBGCP4Q9UGJ1 667 aa23.95■■□□□ 1.42
NPAS3-201ENST00000346562 USP31Q70CQ4 1352 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 HMGB3O15347 200 aaKnown RBP23.94■■□□□ 1.42
NPAS3-201ENST00000346562 SOX11P35716 441 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 SERPINB8P50452 374 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 KDM6BO15054 1643 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 MPZL3Q6UWV2 235 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 CAMKK2Q96RR4 588 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 ACADMP11310 421 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 RRM2P31350 389 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 AMPD2Q01433 879 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 PLOD1Q02809 727 aaPredicted RBP23.94■■□□□ 1.42
NPAS3-201ENST00000346562 TGM3Q08188 693 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 ADGRF2Q8IZF7 708 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 SYNCRIPO60506 623 aaKnown RBP23.94■■□□□ 1.42
NPAS3-201ENST00000346562 CYP11B2P19099 503 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 RPS6P62753 249 aaKnown RBP23.94■■□□□ 1.42
NPAS3-201ENST00000346562 CTXN3Q4LDR2 81 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 CDK5RAP1Q96SZ6 601 aaKnown RBP23.94■■□□□ 1.42
NPAS3-201ENST00000346562 YME1L1Q96TA2 773 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 EPC1Q9H2F5 836 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 RAD18Q9NS91 495 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms