RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 ASB7Q9H672 318 aa16.22■□□□□ 0.19
UPF3B-202ENST00000345865 ACTR5Q9H9F9 607 aaPredicted RBP16.22■□□□□ 0.19
UPF3B-202ENST00000345865 SAMD15Q9P1V8 674 aa16.22■□□□□ 0.19
UPF3B-202ENST00000345865 EFR3BQ9Y2G0 817 aa16.22■□□□□ 0.19
UPF3B-202ENST00000345865 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.22■□□□□ 0.19
UPF3B-202ENST00000345865 EXOC1LA0A1B0GW35 172 aa16.22■□□□□ 0.19
UPF3B-202ENST00000345865 RASA4BC9J798 803 aa16.22■□□□□ 0.19
UPF3B-202ENST00000345865 ALOX15BO15296 676 aa16.22■□□□□ 0.19
UPF3B-202ENST00000345865 RASA4O43374 803 aa16.22■□□□□ 0.19
UPF3B-202ENST00000345865 RASSF9O75901 435 aa16.22■□□□□ 0.19
UPF3B-202ENST00000345865 ADCYAP1R1P41586 468 aa16.22■□□□□ 0.19
UPF3B-202ENST00000345865 MYO1EQ12965 1108 aa16.22■□□□□ 0.19
UPF3B-202ENST00000345865 MSS51Q4VC12 460 aa16.22■□□□□ 0.19
UPF3B-202ENST00000345865 CYP4V2Q6ZWL3 525 aaPredicted RBP16.22■□□□□ 0.19
UPF3B-202ENST00000345865 UNC45BQ8IWX7 931 aa16.22■□□□□ 0.19
UPF3B-202ENST00000345865 TAB3Q8N5C8 712 aaPredicted RBP16.22■□□□□ 0.19
UPF3B-202ENST00000345865 CMASQ8NFW8 434 aaPredicted RBP16.22■□□□□ 0.19
UPF3B-202ENST00000345865 CPT1BQ92523 772 aa16.22■□□□□ 0.19
UPF3B-202ENST00000345865 HEXIM2Q96MH2 286 aaKnown RBP16.22■□□□□ 0.19
UPF3B-202ENST00000345865 CCDC77Q9BR77 488 aa16.22■□□□□ 0.19
UPF3B-202ENST00000345865 WDR83Q9BRX9 315 aaKnown RBP16.22■□□□□ 0.19
UPF3B-202ENST00000345865 KIF9Q9HAQ2 790 aa16.22■□□□□ 0.19
UPF3B-202ENST00000345865 SCN1AP35498 2009 aa16.21■□□□□ 0.19
UPF3B-202ENST00000345865 ADORA2AP29274 412 aa16.21■□□□□ 0.19
UPF3B-202ENST00000345865 GPX6P59796 221 aa16.21■□□□□ 0.19
UPF3B-202ENST00000345865 TNFAIP2Q03169 654 aa16.21■□□□□ 0.19
UPF3B-202ENST00000345865 PDIA2Q13087 525 aaKnown RBP16.21■□□□□ 0.19
UPF3B-202ENST00000345865 HADHQ16836 314 aaKnown RBP16.21■□□□□ 0.19
UPF3B-202ENST00000345865 NUGGCQ68CJ6 796 aa16.21■□□□□ 0.19
UPF3B-202ENST00000345865 ANKMY2Q8IV38 441 aa16.21■□□□□ 0.19
UPF3B-202ENST00000345865 ANKS4BQ8N8V4 417 aa16.21■□□□□ 0.19
UPF3B-202ENST00000345865 SHCBP1Q8NEM2 672 aa16.21■□□□□ 0.19
UPF3B-202ENST00000345865 HSPH1Q92598 858 aa16.21■□□□□ 0.19
UPF3B-202ENST00000345865 FAXDC2Q96IV6 333 aa16.21■□□□□ 0.19
UPF3B-202ENST00000345865 ADAM33Q9BZ11 813 aa16.21■□□□□ 0.19
UPF3B-202ENST00000345865 KATNBL1Q9H079 304 aa16.21■□□□□ 0.19
UPF3B-202ENST00000345865 ABCF3Q9NUQ8 709 aa16.21■□□□□ 0.19
UPF3B-202ENST00000345865 WDR35Q9P2L0 1181 aa16.21■□□□□ 0.19
UPF3B-202ENST00000345865 SHOC2Q9UQ13 582 aa16.21■□□□□ 0.19
UPF3B-202ENST00000345865 TCRBV7S3A2A0A539 114 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 POC1B-GALNT4F8VUJ3 575 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 TSPAN1O60635 241 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 TRUB2O95900 331 aaKnown RBP16.2■□□□□ 0.18
UPF3B-202ENST00000345865 ATICP31939 592 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 RPL22P35268 128 aaKnown RBP16.2■□□□□ 0.18
UPF3B-202ENST00000345865 CTCFP49711 727 aaPredicted RBP16.2■□□□□ 0.18
UPF3B-202ENST00000345865 NDST1P52848 882 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 WDR4P57081 412 aaKnown RBP16.2■□□□□ 0.18
UPF3B-202ENST00000345865 MMRN1Q13201 1228 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 MTM1Q13496 603 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 TMEM132DQ14C87 1099 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 FNBP1LQ5T0N5 605 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 MARCH8Q5T0T0 291 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 MTHFD1LQ6UB35 978 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 TRABD2AQ86V40 505 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 C12orf29Q8N999 325 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 PPTC7Q8NI37 304 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 CYP3A43Q9HB55 503 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 SLC40A1Q9NP59 571 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 USP18Q9UMW8 372 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 DNAH12Q6ZR08 3092 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 CLUHO75153 1309 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 LOC102724159A0A0B4J2E5 919 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 MAGEB2O15479 319 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 PIAS1O75925 651 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 PFKMP08237 780 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 GHRP10912 638 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 PWP2Q15269 919 aaKnown RBP16.2■□□□□ 0.18
UPF3B-202ENST00000345865 FAM102AQ5T9C2 384 aaPredicted RBP16.2■□□□□ 0.18
UPF3B-202ENST00000345865 SMYD5Q6GMV2 418 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 CGB2Q6NT52 195 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 KCTD6Q8NC69 237 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 VPS37BQ9H9H4 285 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 GGT7Q9UJ14 662 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 ACTL7BQ9Y614 415 aa16.2■□□□□ 0.18
UPF3B-202ENST00000345865 PLXNB2O15031 1838 aa16.19■□□□□ 0.18
UPF3B-202ENST00000345865 SPAG7O75391 227 aa16.19■□□□□ 0.18
UPF3B-202ENST00000345865 HMGCRP04035 888 aa16.19■□□□□ 0.18
UPF3B-202ENST00000345865 VDRP11473 427 aa16.19■□□□□ 0.18
UPF3B-202ENST00000345865 FOXN2P32314 431 aa16.19■□□□□ 0.18
UPF3B-202ENST00000345865 INCA1Q0VD86 236 aa16.19■□□□□ 0.18
UPF3B-202ENST00000345865 PKN2Q16513 984 aaKnown RBP16.19■□□□□ 0.18
UPF3B-202ENST00000345865 C15orf59Q2T9L4 293 aaPredicted RBP16.19■□□□□ 0.18
UPF3B-202ENST00000345865 NPNTQ6UXI9 565 aa16.19■□□□□ 0.18
UPF3B-202ENST00000345865 TRPM8Q7Z2W7 1104 aa16.19■□□□□ 0.18
UPF3B-202ENST00000345865 NAT8LQ8N9F0 302 aa16.19■□□□□ 0.18
UPF3B-202ENST00000345865 NLRP7Q8WX94 980 aa16.19■□□□□ 0.18
UPF3B-202ENST00000345865 P3H4Q92791 437 aa16.19■□□□□ 0.18
UPF3B-202ENST00000345865 MRRFQ96E11 262 aaKnown RBP16.19■□□□□ 0.18
UPF3B-202ENST00000345865 TTC25Q96NG3 672 aa16.19■□□□□ 0.18
UPF3B-202ENST00000345865 ADPGKQ9BRR6 497 aa16.19■□□□□ 0.18
UPF3B-202ENST00000345865 HAUS2Q9NVX0 235 aa16.19■□□□□ 0.18
UPF3B-202ENST00000345865 DPP3Q9NY33 737 aa16.19■□□□□ 0.18
UPF3B-202ENST00000345865 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.19■□□□□ 0.18
UPF3B-202ENST00000345865 BARX2Q9UMQ3 279 aaPredicted RBP16.19■□□□□ 0.18
UPF3B-202ENST00000345865 A0A1B0GUA9 196 aa16.19■□□□□ 0.18
UPF3B-202ENST00000345865 E5RJQ4 531 aa16.19■□□□□ 0.18
UPF3B-202ENST00000345865 H3BRB1 525 aa16.19■□□□□ 0.18
UPF3B-202ENST00000345865 GRAP2O75791 330 aa16.19■□□□□ 0.18
UPF3B-202ENST00000345865 SNAI1O95863 264 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms