RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 MAGED2Q9UNF1 606 aaPredicted RBP22.1■■□□□ 1.13
SMARCB1-202ENST00000344921 MRPS23Q9Y3D9 190 aaKnown RBP22.1■■□□□ 1.13
SMARCB1-202ENST00000344921 F8VP50 259 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 AP1G2O75843 785 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 CD19P15391 556 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 GBP2P32456 591 aaPredicted RBP22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 FILIP1LQ4L180 1135 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 UBR7Q8N806 425 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 STKLD1Q8NE28 680 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 ADAMTS19Q8TE59 1207 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 KRT82Q9NSB4 513 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 VCANP13611 3396 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 LGALS16A8MUM7 142 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 SERPINC1P01008 464 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 CSH1P0DML2 217 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 CSH2P0DML3 217 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 ACO1P21399 889 aaKnown RBP22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 USP8P40818 1118 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 PPP1R26Q5T8A7 1209 aaPredicted RBP22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 PAQR9Q6ZVX9 377 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 OTOP3Q7RTS5 596 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 LEMD2Q8NC56 503 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 JAKMIP2Q96AA8 810 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 ACSF2Q96CM8 615 aaPredicted RBP22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 SIX2Q9NPC8 291 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 DNAJC12Q9UKB3 198 aa22.09■■□□□ 1.13
SMARCB1-202ENST00000344921 PTPRDP23468 1912 aa22.08■■□□□ 1.13
SMARCB1-202ENST00000344921 MYH10P35580 1976 aa22.08■■□□□ 1.12
SMARCB1-202ENST00000344921 ZNF197O14709 1029 aa22.08■■□□□ 1.12
SMARCB1-202ENST00000344921 SSTR3P32745 418 aaPredicted RBP22.08■■□□□ 1.12
SMARCB1-202ENST00000344921 CACNA2D1P54289 1103 aa22.08■■□□□ 1.12
SMARCB1-202ENST00000344921 SGO2Q562F6 1265 aa22.08■■□□□ 1.12
SMARCB1-202ENST00000344921 RBBP8NLQ8NC74 664 aaPredicted RBP22.08■■□□□ 1.12
SMARCB1-202ENST00000344921 KCNK16Q96T55 309 aa22.08■■□□□ 1.12
SMARCB1-202ENST00000344921 HNRNPABQ99729 332 aaKnown RBP22.08■■□□□ 1.12
SMARCB1-202ENST00000344921 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.08■■□□□ 1.12
SMARCB1-202ENST00000344921 FAM200BP0CF97 657 aa22.07■■□□□ 1.12
SMARCB1-202ENST00000344921 ZP2Q05996 745 aa22.07■■□□□ 1.12
SMARCB1-202ENST00000344921 MTMR3Q13615 1198 aa22.07■■□□□ 1.12
SMARCB1-202ENST00000344921 APTXQ7Z2E3 356 aaKnown RBP22.07■■□□□ 1.12
SMARCB1-202ENST00000344921 TDRD5Q8NAT2 981 aaKnown RBP22.07■■□□□ 1.12
SMARCB1-202ENST00000344921 ITFG1Q8TB96 612 aa22.07■■□□□ 1.12
SMARCB1-202ENST00000344921 ING5Q8WYH8 240 aa22.07■■□□□ 1.12
SMARCB1-202ENST00000344921 C8orf48Q96LL4 319 aa22.07■■□□□ 1.12
SMARCB1-202ENST00000344921 NECAB3Q96P71 396 aaPredicted RBP22.07■■□□□ 1.12
SMARCB1-202ENST00000344921 DMAP1Q9NPF5 467 aaPredicted RBP22.07■■□□□ 1.12
SMARCB1-202ENST00000344921 USTQ9Y2C2 406 aa22.07■■□□□ 1.12
SMARCB1-202ENST00000344921 SLC38A8A6NNN8 435 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 RNF225M0QZC1 329 aaPredicted RBP22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 PAEPP09466 180 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 MAP3K7CLP57077 242 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 RAPGEF1Q13905 1077 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 SYCP1Q15431 976 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 SLC5A9Q2M3M2 681 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 KLHDC7AQ5VTJ3 777 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 DENND5BQ6ZUT9 1274 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 SPATA17Q96L03 361 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 UHRF1Q96T88 793 aaPredicted RBP22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 KIAA1257Q9ULG3 409 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 A0A0C4DFX4 3053 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 DENND4AQ7Z401 1863 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 C2CD4DB7Z1M9 353 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 VDRP11473 427 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 GABRR2P28476 465 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 KLK7P49862 253 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 ZNF445P59923 1031 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 IFRD2Q12894 506 aaPredicted RBP22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 RNF214Q8ND24 703 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 TCEAL4Q96EI5 215 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 ATXN3LQ9H3M9 355 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 ZNF334Q9HCZ1 680 aaPredicted RBP22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 AVENQ9NQS1 362 aaPredicted RBP22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 FAM207AQ9NSI2 230 aaPredicted RBP22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 TMEM30AQ9NV96 361 aa22.06■■□□□ 1.12
SMARCB1-202ENST00000344921 A0A1W2PRU2 124 aa22.05■■□□□ 1.12
SMARCB1-202ENST00000344921 FGF19O95750 216 aa22.05■■□□□ 1.12
SMARCB1-202ENST00000344921 UCHL3P15374 230 aa22.05■■□□□ 1.12
SMARCB1-202ENST00000344921 GJA1P17302 382 aa22.05■■□□□ 1.12
SMARCB1-202ENST00000344921 CCR2P41597 374 aa22.05■■□□□ 1.12
SMARCB1-202ENST00000344921 EPHA5P54756 1037 aa22.05■■□□□ 1.12
SMARCB1-202ENST00000344921 TMC8Q8IU68 726 aa22.05■■□□□ 1.12
SMARCB1-202ENST00000344921 GCNAQ96QF7 691 aa22.05■■□□□ 1.12
SMARCB1-202ENST00000344921 UXTQ9UBK9 157 aaPredicted RBP22.05■■□□□ 1.12
SMARCB1-202ENST00000344921 HESX1Q9UBX0 185 aa22.05■■□□□ 1.12
SMARCB1-202ENST00000344921 FHOD1Q9Y613 1164 aa22.05■■□□□ 1.12
SMARCB1-202ENST00000344921 BEST1O76090 585 aa22.04■■□□□ 1.12
SMARCB1-202ENST00000344921 HMGA1P17096 107 aaKnown RBP22.04■■□□□ 1.12
SMARCB1-202ENST00000344921 SLC8A3P57103 927 aa22.04■■□□□ 1.12
SMARCB1-202ENST00000344921 PRSS36Q5K4E3 855 aa22.04■■□□□ 1.12
SMARCB1-202ENST00000344921 ARHGAP17Q68EM7 881 aa22.04■■□□□ 1.12
SMARCB1-202ENST00000344921 PLCD3Q8N3E9 789 aa22.04■■□□□ 1.12
SMARCB1-202ENST00000344921 FGF13Q92913 245 aa22.04■■□□□ 1.12
SMARCB1-202ENST00000344921 CEP295NLQ96MC4 621 aa22.04■■□□□ 1.12
SMARCB1-202ENST00000344921 MYADMQ96S97 322 aa22.04■■□□□ 1.12
SMARCB1-202ENST00000344921 SMOQ99835 787 aa22.04■■□□□ 1.12
SMARCB1-202ENST00000344921 LRRC3Q9BY71 257 aa22.04■■□□□ 1.12
SMARCB1-202ENST00000344921 SLITRK6Q9H5Y7 841 aa22.04■■□□□ 1.12
SMARCB1-202ENST00000344921 PLCB1Q9NQ66 1216 aa22.04■■□□□ 1.12
SMARCB1-202ENST00000344921 RTN4Q9NQC3 1192 aaKnown RBP22.04■■□□□ 1.12
SMARCB1-202ENST00000344921 EHD2Q9NZN4 543 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms