RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 GTF3C4Q9UKN8 822 aa14.7□□□□□ -0.06
TPM4-202ENST00000344824 MYO16Q9Y6X6 1858 aa14.7□□□□□ -0.06
TPM4-202ENST00000344824 ZNF318Q5VUA4 2279 aa14.7□□□□□ -0.06
TPM4-202ENST00000344824 ZNF197O14709 1029 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 HLA-DRAP01903 254 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 CFHP08603 1231 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 PDGFRBP09619 1106 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 ATF6P18850 670 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 TRIM21P19474 475 aaKnown RBP14.69□□□□□ -0.06
TPM4-202ENST00000344824 RFX1P22670 979 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 PON1P27169 355 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 RAP1GAPP47736 663 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 TUFMP49411 452 aaKnown RBP14.69□□□□□ -0.06
TPM4-202ENST00000344824 GPR15P49685 360 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 AP3M2P53677 418 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 CLDN10P78369 228 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 HTR4Q13639 388 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 NFE2Q16621 373 aaPredicted RBP14.69□□□□□ -0.06
TPM4-202ENST00000344824 ZACNQ401N2 412 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 ZNF667Q5HYK9 610 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 PARM1Q6UWI2 310 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 ITIH5Q86UX2 942 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 SPATA2LQ8IUW3 424 aaPredicted RBP14.69□□□□□ -0.06
TPM4-202ENST00000344824 C2orf15Q8WU43 125 aaKnown RBP14.69□□□□□ -0.06
TPM4-202ENST00000344824 KBTBD7Q8WVZ9 684 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 SEMA4DQ92854 862 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 FGF14Q92915 247 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 PBXIP1Q96AQ6 731 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 PDLIM2Q96JY6 352 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 MFSD1Q9H3U5 465 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 DUSP12Q9UNI6 340 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 ZFP37Q9Y6Q3 630 aaPredicted RBP14.69□□□□□ -0.06
TPM4-202ENST00000344824 MIA3Q5JRA6 1907 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 TICRRQ7Z2Z1 1910 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 ITIH6Q6UXX5 1313 aa14.69□□□□□ -0.06
TPM4-202ENST00000344824 A0A1W2PRU2 124 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 GTPBP10A4D1E9 387 aaKnown RBP14.68□□□□□ -0.06
TPM4-202ENST00000344824 GOLGA6L6A8MZA4 724 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 EPHB6O15197 1021 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 P4HA2O15460 535 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 ATP2C2O75185 946 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 VNN1O95497 513 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 PDGFBP01127 241 aaPredicted RBP14.68□□□□□ -0.06
TPM4-202ENST00000344824 HAPLN1P10915 354 aaPredicted RBP14.68□□□□□ -0.06
TPM4-202ENST00000344824 WARSP23381 471 aaKnown RBP14.68□□□□□ -0.06
TPM4-202ENST00000344824 ATICP31939 592 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 MCCD1P59942 119 aaPredicted RBP14.68□□□□□ -0.06
TPM4-202ENST00000344824 CYP27A1Q02318 531 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 SMARCB1Q12824 385 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 PRSS36Q5K4E3 855 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 SDHAF4Q5VUM1 108 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 GJB7Q6PEY0 223 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 MTSS1LQ765P7 747 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 DPH6Q7L8W6 267 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 SCN4BQ8IWT1 228 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 SUGP1Q8IWZ8 645 aaKnown RBP14.68□□□□□ -0.06
TPM4-202ENST00000344824 EHBP1Q8NDI1 1231 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 FBXL13Q8NEE6 735 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 MYLPFQ96A32 169 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 GCNAQ96QF7 691 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 SMYD3Q9H7B4 428 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 RAB20Q9NX57 234 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 MAGED2Q9UNF1 606 aaPredicted RBP14.68□□□□□ -0.06
TPM4-202ENST00000344824 HCN4Q9Y3Q4 1203 aa14.68□□□□□ -0.06
TPM4-202ENST00000344824 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.68□□□□□ -0.061e-6■■□□□ 14.5
TPM4-202ENST00000344824 MYBPHLA2RUH7 354 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 A8MXQ7 604 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 NRG2O14511 850 aaPredicted RBP14.67□□□□□ -0.06
TPM4-202ENST00000344824 GABRDO14764 452 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 TPM1P09493 284 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 CYP2F1P24903 491 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 LMO2P25791 158 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 GABRR2P28476 465 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 TEAD2Q15562 447 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 MDH1BQ5I0G3 518 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 SPOPLQ6IQ16 392 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 TRIM65Q6PJ69 517 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 C4orf50Q6ZRC1 276 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 GPIHBP1Q8IV16 184 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 LEMD2Q8NC56 503 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 SHKBP1Q8TBC3 707 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 SPATA18Q8TC71 538 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 PSMG2Q969U7 264 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 PPP1R9BQ96SB3 815 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 IMPG2Q9BZV3 1241 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 ATXN3LQ9H3M9 355 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 ZNF334Q9HCZ1 680 aaPredicted RBP14.67□□□□□ -0.06
TPM4-202ENST00000344824 SIX2Q9NPC8 291 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 NLRC4Q9NPP4 1024 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 CDH9Q9ULB4 789 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 CA14Q9ULX7 337 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 ASB3Q9Y575 518 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 ANAPC1Q9H1A4 1944 aa14.67□□□□□ -0.06
TPM4-202ENST00000344824 KIF26AQ9ULI4 1882 aaPredicted RBP14.67□□□□□ -0.06
TPM4-202ENST00000344824 GYPCP04921 128 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 CASP14P31944 242 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 GNL1P36915 607 aaPredicted RBP14.66□□□□□ -0.06
TPM4-202ENST00000344824 POLR2FP61218 127 aaKnown RBP14.66□□□□□ -0.06
TPM4-202ENST00000344824 CYP4F8P98187 520 aa14.66□□□□□ -0.06
TPM4-202ENST00000344824 DDR2Q16832 855 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms