RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 TRAPPC11Q7Z392 1133 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.29□□□□□ -0.28
SGCA-202ENST00000344627 MAB21L3Q8N8X9 362 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 FSIP1Q8NA03 581 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 TRMT2BQ96GJ1 504 aaKnown RBP13.29□□□□□ -0.28
SGCA-202ENST00000344627 FUBP3Q96I24 572 aaKnown RBP eCLIP13.29□□□□□ -0.28
SGCA-202ENST00000344627 SPATA32Q96LK8 384 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 FAM83CQ9BQN1 747 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 SMG9Q9H0W8 520 aaKnown RBP13.29□□□□□ -0.28
SGCA-202ENST00000344627 SNX25Q9H3E2 840 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 IL21Q9HBE4 155 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 SEMA4GQ9NTN9 838 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 TDP1Q9NUW8 608 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 PCDHGA5Q9Y5G8 931 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 KIF26AQ9ULI4 1882 aaPredicted RBP13.29□□□□□ -0.28
SGCA-202ENST00000344627 DMXL1Q9Y485 3027 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 TRDMT1O14717 391 aaKnown RBP13.28□□□□□ -0.28
SGCA-202ENST00000344627 ATP2C2O75185 946 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 F11P03951 625 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 SOX9P48436 509 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 NLRP12P59046 1061 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 PSMC1P62191 440 aaKnown RBP13.28□□□□□ -0.28
SGCA-202ENST00000344627 SNRPFP62306 86 aaKnown RBP13.28□□□□□ -0.28
SGCA-202ENST00000344627 TNNC1P63316 161 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 KRT85P78386 507 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 CYP27A1Q02318 531 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 GAS6Q14393 721 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 PSMD6Q15008 389 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 MAPRE1Q15691 268 aaKnown RBP13.28□□□□□ -0.28
SGCA-202ENST00000344627 KNOP1Q1ED39 458 aaKnown RBP13.28□□□□□ -0.28
SGCA-202ENST00000344627 TMEM196Q5HYL7 178 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 C4orf50Q6ZRC1 276 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 CEP68Q76N32 757 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 CACNA2D4Q7Z3S7 1137 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 C11orf74Q86VG3 221 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 MON1AQ86VX9 555 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 CXorf38Q8TB03 319 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 PAGE5Q96GU1 130 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 MYRFLQ96LU7 910 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 CGRRF1Q99675 332 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 SYT15Q9BQS2 421 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 SLC46A2Q9BY10 475 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 TRPC7Q9HCX4 862 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 GTSE1Q9NYZ3 720 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 MAGEC2Q9UBF1 373 aaPredicted RBP13.28□□□□□ -0.28
SGCA-202ENST00000344627 FRYLO94915 3013 aa13.28□□□□□ -0.28
SGCA-202ENST00000344627 COL4A2P08572 1712 aa13.27□□□□□ -0.28
SGCA-202ENST00000344627 ATG2BQ96BY7 2078 aa13.27□□□□□ -0.28
SGCA-202ENST00000344627 GABRDO14764 452 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 HRO43593 1189 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 PRAMEF12O95522 483 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 CST3P01034 146 aaPredicted RBP13.27□□□□□ -0.29
SGCA-202ENST00000344627 FAM163BP0C2L3 166 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 TCF3P15923 654 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 PFKFB1P16118 471 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 HMGA1P17096 107 aaKnown RBP13.27□□□□□ -0.29
SGCA-202ENST00000344627 CMA1P23946 247 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 LMO2P25791 158 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 GNL1P36915 607 aaPredicted RBP13.27□□□□□ -0.29
SGCA-202ENST00000344627 PPP3CCP48454 512 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 FNTBP49356 437 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 SPEM2Q0P670 501 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 NR1H3Q13133 447 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 BIRC3Q13489 604 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 PON2Q15165 354 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 CCDC142Q17RM4 750 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 CFAP221Q4G0U5 840 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 TXNDC8Q6A555 127 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 PRR23CQ6ZRP0 262 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 OR6B3Q8NGW1 331 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 GOLGA5Q8TBA6 731 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 GAB3Q8WWW8 586 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 CCDC47Q96A33 483 aaKnown RBP13.27□□□□□ -0.29
SGCA-202ENST00000344627 CHAMP1Q96JM3 812 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 LRRC3BQ96PB8 259 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 GKN1Q9NS71 199 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 CGNQ9P2M7 1197 aaKnown RBP13.27□□□□□ -0.29
SGCA-202ENST00000344627 NXF1Q9UBU9 619 aaKnown RBP13.27□□□□□ -0.29
SGCA-202ENST00000344627 CDH9Q9ULB4 789 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 SLC8A2Q9UPR5 921 aa13.27□□□□□ -0.29
SGCA-202ENST00000344627 ACTN4O43707 911 aaKnown RBP13.26□□□□□ -0.29
SGCA-202ENST00000344627 NOL4O94818 638 aa13.26□□□□□ -0.29
SGCA-202ENST00000344627 ADRB1P08588 477 aa13.26□□□□□ -0.29
SGCA-202ENST00000344627 WARSP23381 471 aaKnown RBP13.26□□□□□ -0.29
SGCA-202ENST00000344627 BDNFP23560 247 aa13.26□□□□□ -0.29
SGCA-202ENST00000344627 ANXA13P27216 316 aa13.26□□□□□ -0.29
SGCA-202ENST00000344627 GRIK1P39086 918 aa13.26□□□□□ -0.29
SGCA-202ENST00000344627 SYKP43405 635 aa13.26□□□□□ -0.29
SGCA-202ENST00000344627 CASP4P49662 377 aa13.26□□□□□ -0.29
SGCA-202ENST00000344627 FAM160A1Q05DH4 1040 aa13.26□□□□□ -0.29
SGCA-202ENST00000344627 TNK2Q07912 1038 aa13.26□□□□□ -0.29
SGCA-202ENST00000344627 EHHADHQ08426 723 aa13.26□□□□□ -0.29
SGCA-202ENST00000344627 WDR72Q3MJ13 1102 aa13.26□□□□□ -0.29
SGCA-202ENST00000344627 KMT5BQ4FZB7 885 aa13.26□□□□□ -0.29
SGCA-202ENST00000344627 TXNDC11Q6PKC3 985 aa13.26□□□□□ -0.29
SGCA-202ENST00000344627 CPA6Q8N4T0 437 aa13.26□□□□□ -0.29
SGCA-202ENST00000344627 MYLPFQ96A32 169 aa13.26□□□□□ -0.29
SGCA-202ENST00000344627 ACDQ96AP0 544 aa13.26□□□□□ -0.29
SGCA-202ENST00000344627 PARD6AQ9NPB6 346 aa13.26□□□□□ -0.29
SGCA-202ENST00000344627 USP25Q9UHP3 1055 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms