RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 SPATA18Q8TC71 538 aa13.4□□□□□ -0.26
CT55-202ENST00000344129 IPO4Q8TEX9 1081 aaKnown RBP13.4□□□□□ -0.26
CT55-202ENST00000344129 SLC35F5Q8WV83 523 aa13.4□□□□□ -0.26
CT55-202ENST00000344129 MCEEQ96PE7 176 aa13.4□□□□□ -0.26
CT55-202ENST00000344129 YME1L1Q96TA2 773 aa13.4□□□□□ -0.26
CT55-202ENST00000344129 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.4□□□□□ -0.26
CT55-202ENST00000344129 DUSP16Q9BY84 665 aa13.4□□□□□ -0.26
CT55-202ENST00000344129 KRT82Q9NSB4 513 aa13.4□□□□□ -0.26
CT55-202ENST00000344129 PARVAQ9NVD7 372 aa13.4□□□□□ -0.26
CT55-202ENST00000344129 MRPL42Q9Y6G3 142 aaKnown RBP13.4□□□□□ -0.26
CT55-202ENST00000344129 SCINQ9Y6U3 715 aa13.4□□□□□ -0.26
CT55-202ENST00000344129 SF3B1O75533 1304 aaKnown RBP eCLIP13.4□□□□□ -0.26
CT55-202ENST00000344129 VWA8A3KMH1 1905 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 TCRBV5S1A1TA0A578 114 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 AP1G2O75843 785 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 SETSIPP0DME0 302 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 LCP1P13796 627 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 CXCR5P32302 372 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 GABRB2P47870 512 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 CACNA2D1P54289 1103 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 MAP3K7CLP57077 242 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 AMPD2Q01433 879 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 TSPY1Q01534 308 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 PAPD7Q5XG87 772 aaKnown RBP13.39□□□□□ -0.27
CT55-202ENST00000344129 OR6B2Q6IFH4 312 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 FAM183BPQ6ZVS7 135 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 NT5DC3Q86UY8 548 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 SYCE1Q8N0S2 351 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 FEZF2Q8TBJ5 459 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 PKMYT1Q99640 499 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 SELENOOQ9BVL4 669 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 SLC4A5Q9BY07 1137 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 MRPL47Q9HD33 250 aaKnown RBP13.39□□□□□ -0.27
CT55-202ENST00000344129 ABCB6Q9NP58 842 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 STRIP2Q9ULQ0 834 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 ALG6Q9Y672 507 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 SYN3O14994 580 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 ZNF185O15231 689 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 OAZ2O95190 189 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 FAM200BP0CF97 657 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 NPR3P17342 541 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 COMTP21964 271 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 FGFR3P22607 806 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 PLCB3Q01970 1234 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 SLC39A12Q504Y0 691 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 RTP2Q5QGT7 225 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 DAB2IPQ5VWQ8 1189 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 C11orf63Q6NUN7 778 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 FAM171BQ6P995 826 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 DCUN1D2Q6PH85 259 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 KCNT2Q6UVM3 1135 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 CLEC20AQ6ZU45 233 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 CMTR2Q8IYT2 770 aaKnown RBP13.39□□□□□ -0.27
CT55-202ENST00000344129 C3orf20Q8ND61 904 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 JOSD2Q8TAC2 188 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 DPF3Q92784 378 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 PIWIL1Q96J94 861 aaKnown RBP13.39□□□□□ -0.27
CT55-202ENST00000344129 CAPZA3Q96KX2 299 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 SMOQ99835 787 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 HTATIP2Q9BUP3 242 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 MIS12Q9H081 205 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 METTL5Q9NRN9 209 aaKnown RBP13.39□□□□□ -0.27
CT55-202ENST00000344129 TMEM30AQ9NV96 361 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 AMFRQ9UKV5 643 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 SNX12Q9UMY4 172 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 MRFAP1Q9Y605 127 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 SAR1BQ9Y6B6 198 aa13.39□□□□□ -0.27
CT55-202ENST00000344129 TMEM191CA6NGB0 347 aa13.38□□□□□ -0.27
CT55-202ENST00000344129 MYO1FO00160 1098 aa13.38□□□□□ -0.27
CT55-202ENST00000344129 XPO1O14980 1071 aaKnown RBP13.38□□□□□ -0.27
CT55-202ENST00000344129 BDNFP23560 247 aa13.38□□□□□ -0.27
CT55-202ENST00000344129 ARPP19P56211 112 aa13.38□□□□□ -0.27
CT55-202ENST00000344129 RNASE9P60153 205 aaKnown RBP13.38□□□□□ -0.27
CT55-202ENST00000344129 ZNF268Q14587 947 aaPredicted RBP13.38□□□□□ -0.27
CT55-202ENST00000344129 RPS6KA1Q15418 735 aa13.38□□□□□ -0.27
CT55-202ENST00000344129 CTXN3Q4LDR2 81 aa13.38□□□□□ -0.27
CT55-202ENST00000344129 PPP1R15BQ5SWA1 713 aa13.38□□□□□ -0.27
CT55-202ENST00000344129 FAM102AQ5T9C2 384 aaPredicted RBP13.38□□□□□ -0.27
CT55-202ENST00000344129 COL13A1Q5TAT6 717 aaPredicted RBP13.38□□□□□ -0.27
CT55-202ENST00000344129 PSRC1Q6PGN9 363 aaPredicted RBP13.38□□□□□ -0.27
CT55-202ENST00000344129 PIGZQ86VD9 579 aa13.38□□□□□ -0.27
CT55-202ENST00000344129 SCUBE3Q8IX30 993 aa13.38□□□□□ -0.27
CT55-202ENST00000344129 EMC1Q8N766 993 aa13.38□□□□□ -0.27
CT55-202ENST00000344129 CLEC4CQ8WTT0 213 aa13.38□□□□□ -0.27
CT55-202ENST00000344129 ABHD8Q96I13 439 aa13.38□□□□□ -0.27
CT55-202ENST00000344129 IGSF21Q96ID5 467 aa13.38□□□□□ -0.27
CT55-202ENST00000344129 ZNF558Q96NG5 402 aa13.38□□□□□ -0.27
CT55-202ENST00000344129 OSBPL9Q96SU4 736 aa13.38□□□□□ -0.27
CT55-202ENST00000344129 KCNK16Q96T55 309 aa13.38□□□□□ -0.27
CT55-202ENST00000344129 ZBED2Q9BTP6 218 aa13.38□□□□□ -0.27
CT55-202ENST00000344129 VN1R3Q9BXE9 311 aa13.38□□□□□ -0.27
CT55-202ENST00000344129 PAPSS1O43252 624 aaPredicted RBP13.37□□□□□ -0.27
CT55-202ENST00000344129 SPOPO43791 374 aa13.37□□□□□ -0.27
CT55-202ENST00000344129 GRAP2O75791 330 aa13.37□□□□□ -0.27
CT55-202ENST00000344129 KRT3P12035 628 aa13.37□□□□□ -0.27
CT55-202ENST00000344129 PLA2G4AP47712 749 aa13.37□□□□□ -0.27
CT55-202ENST00000344129 SLC8A3P57103 927 aa13.37□□□□□ -0.27
CT55-202ENST00000344129 OGDHQ02218 1023 aa13.37□□□□□ -0.27
CT55-202ENST00000344129 ELAVL2Q12926 359 aaKnown RBP13.37□□□□□ -0.27
CT55-202ENST00000344129 TAF5Q15542 800 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms