RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 HNRNPABQ99729 332 aaKnown RBP8.6□□□□□ -1.03
HMGCR-202ENST00000343975 NHEJ1Q9H9Q4 299 aaPredicted RBP8.6□□□□□ -1.03
HMGCR-202ENST00000343975 CLDND1Q9NY35 253 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 AIPL1Q9NZN9 384 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 YBX2Q9Y2T7 364 aaKnown RBP8.6□□□□□ -1.03
HMGCR-202ENST00000343975 MYBPHLA2RUH7 354 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 F8VP50 259 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 TEX28O15482 410 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 KIF5CO60282 957 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 PNMA6AP0CW24 399 aaPredicted RBP8.6□□□□□ -1.03
HMGCR-202ENST00000343975 MYL4P12829 197 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 AARSP49588 968 aaKnown RBP eCLIP8.6□□□□□ -1.03
HMGCR-202ENST00000343975 PTPN14Q15678 1187 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 ARHGAP17Q68EM7 881 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 SLC47A2Q86VL8 602 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 LEMD2Q8NC56 503 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 ZBP1Q9H171 429 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 TLR8Q9NR97 1041 aaKnown RBP8.6□□□□□ -1.03
HMGCR-202ENST00000343975 NAGPAQ9UK23 515 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 TYW5A2RUC4 315 aaKnown RBP8.6□□□□□ -1.03
HMGCR-202ENST00000343975 MYO1FO00160 1098 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 RTN2O75298 545 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 MICAL2O94851 1124 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 RAD23BP54727 409 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 FAM102AQ5T9C2 384 aaPredicted RBP8.6□□□□□ -1.03
HMGCR-202ENST00000343975 CCDC181Q5TID7 509 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 LCLAT1Q6UWP7 414 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 RTL10Q7L3V2 364 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 OSTM1Q86WC4 334 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 NUP93Q8N1F7 819 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 PCED1BQ96HM7 432 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 PPP1R13BQ96KQ4 1090 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 KLHL5Q96PQ7 755 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 DUSP16Q9BY84 665 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 SLC27A5Q9Y2P5 690 aa8.6□□□□□ -1.03
HMGCR-202ENST00000343975 CNPP09543 421 aaKnown RBP8.59□□□□□ -1.03
HMGCR-202ENST00000343975 ATF2P15336 505 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 LMO2P25791 158 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 CDC25CP30307 473 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 MAGEA11P43364 429 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 PSEN1P49768 467 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 TKTL1P51854 596 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 CDK17Q00537 523 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 APBA1Q02410 837 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 ZDHHC17Q8IUH5 632 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 SLC4A11Q8NBS3 891 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 C1orf131Q8NDD1 294 aaKnown RBP8.59□□□□□ -1.03
HMGCR-202ENST00000343975 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.59□□□□□ -1.03
HMGCR-202ENST00000343975 LNX1Q8TBB1 728 aaPredicted RBP8.59□□□□□ -1.03
HMGCR-202ENST00000343975 ZCWPW1Q9H0M4 648 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 HSD3B7Q9H2F3 369 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 TRPC7Q9HCX4 862 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 TMEM51Q9NW97 253 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 LMCD1Q9NZU5 365 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 CNOT8Q9UFF9 292 aaKnown RBP8.59□□□□□ -1.03
HMGCR-202ENST00000343975 LSM7Q9UK45 103 aaKnown RBP8.59□□□□□ -1.03
HMGCR-202ENST00000343975 MRPS23Q9Y3D9 190 aaKnown RBP8.59□□□□□ -1.03
HMGCR-202ENST00000343975 CEP350Q5VT06 3117 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 O00370 1275 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 HNRNPA1P09651 372 aaKnown RBP eCLIP8.59□□□□□ -1.03
HMGCR-202ENST00000343975 SPATA31D3P0C874 917 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 GZMAP12544 262 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 HOXB8P17481 243 aaPredicted RBP8.59□□□□□ -1.03
HMGCR-202ENST00000343975 SDC4P31431 198 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 CDR1P51861 262 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 PDE4CQ08493 712 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 HADHQ16836 314 aaKnown RBP8.59□□□□□ -1.03
HMGCR-202ENST00000343975 PPP1R26Q5T8A7 1209 aaPredicted RBP8.59□□□□□ -1.03
HMGCR-202ENST00000343975 CC2D1AQ6P1N0 951 aaPredicted RBP8.59□□□□□ -1.03
HMGCR-202ENST00000343975 SPATA31D4Q6ZUB0 917 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 YAF2Q8IY57 180 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 C12orf29Q8N999 325 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 EPS8L1Q8TE68 723 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 GIPC2Q8TF65 315 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 CORO1BQ9BR76 489 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 CXCL16Q9H2A7 254 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 MAN1C1Q9NR34 630 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.59□□□□□ -1.03
HMGCR-202ENST00000343975 YIPF1Q9Y548 306 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 MTMR11A4FU01 709 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 C5orf67F2Z3F1 127 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 XPO1O14980 1071 aaKnown RBP8.59□□□□□ -1.03
HMGCR-202ENST00000343975 SPOPO43791 374 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 FTLP02792 175 aaPredicted RBP8.59□□□□□ -1.03
HMGCR-202ENST00000343975 CKMP06732 381 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 PTPN2P17706 415 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 CYP2F1P24903 491 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 SSTR3P32745 418 aaPredicted RBP8.59□□□□□ -1.03
HMGCR-202ENST00000343975 PRKCIP41743 596 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 GPC5P78333 572 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 SLC18A3Q16572 532 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 MEA1Q16626 185 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 CFAP221Q4G0U5 840 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 SLC8B1Q6J4K2 584 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 TMEM173Q86WV6 379 aaPredicted RBP8.59□□□□□ -1.03
HMGCR-202ENST00000343975 RHOT2Q8IXI1 618 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 DNAJC7Q99615 494 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 ATXN3LQ9H3M9 355 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 SFXN1Q9H9B4 322 aa8.59□□□□□ -1.03
HMGCR-202ENST00000343975 CHST7Q9NS84 486 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms