RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 SNAPC2Q13487 334 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 C16orf72Q14CZ0 275 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 CNGA3Q16281 694 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 MAPK6Q16659 721 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 HYIQ5T013 277 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 IZUMO3Q5VZ72 239 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 SPTY2D1Q68D10 685 aaPredicted RBP8.5□□□□□ -1.05
ATG4A-201ENST00000343524 C4orf33Q8N1A6 199 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 METTL25Q8N6Q8 603 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 LINC00116Q8NCU8 138 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 RAB3IL1Q8TBN0 382 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 STARD8Q92502 1023 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 KRT35Q92764 455 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 CAPNS2Q96L46 248 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 MTMR9Q96QG7 549 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 FAM96AQ9H5X1 160 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 STN1Q9H668 368 aaKnown RBP8.5□□□□□ -1.05
ATG4A-201ENST00000343524 ARHGEF4Q9NR80 690 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 VPS45Q9NRW7 570 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 SEPT11Q9NVA2 429 aaKnown RBP8.5□□□□□ -1.05
ATG4A-201ENST00000343524 ATAD3AQ9NVI7 634 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 TBC1D7Q9P0N9 293 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 LRP2BPQ9P2M1 347 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 GRID1Q9ULK0 1009 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 COG5Q9UP83 839 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 CEPT1Q9Y6K0 416 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 CASP8AP2Q9UKL3 1982 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 A0A088AWK7 358 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 GNPATO15228 680 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 ADCY6O43306 1168 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 ITM2AO43736 263 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 LRRN2O75325 713 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 ENO1P06733 434 aaKnown RBP8.49□□□□□ -1.05
ATG4A-201ENST00000343524 SRGAP2CP0DJJ0 459 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 SRGAP2BP0DMP2 458 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 MYL2P10916 166 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 CYP2C9P11712 490 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 PTPN2P17706 415 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 FGFR2P21802 821 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 CYP7A1P22680 504 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 PEX2P28328 305 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 SERPINB6P35237 376 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 PIK3CAP42336 1068 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 VCPP55072 806 aaKnown RBP8.49□□□□□ -1.05
ATG4A-201ENST00000343524 CTSWP56202 376 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 NOP14P78316 857 aaKnown RBP8.49□□□□□ -1.05
ATG4A-201ENST00000343524 PRKD1Q15139 912 aaPredicted RBP8.49□□□□□ -1.05
ATG4A-201ENST00000343524 PKN2Q16513 984 aaKnown RBP8.49□□□□□ -1.05
ATG4A-201ENST00000343524 KNOP1Q1ED39 458 aaKnown RBP8.49□□□□□ -1.05
ATG4A-201ENST00000343524 ZNF829Q3KNS6 432 aaPredicted RBP8.49□□□□□ -1.05
ATG4A-201ENST00000343524 IL23RQ5VWK5 629 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 LPCAT2Q7L5N7 544 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 PEX5LQ8IYB4 626 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 RTKN2Q8IZC4 609 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 SLC26A7Q8TE54 656 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 SH3RF3Q8TEJ3 882 aaPredicted RBP8.49□□□□□ -1.05
ATG4A-201ENST00000343524 DCUN1D1Q96GG9 259 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 C7orf26Q96N11 449 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 GPR101Q96P66 508 aaPredicted RBP8.49□□□□□ -1.05
ATG4A-201ENST00000343524 ZBTB3Q9H5J0 574 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 FBXO6Q9NRD1 293 aaPredicted RBP8.49□□□□□ -1.05
ATG4A-201ENST00000343524 DNAJC17Q9NVM6 304 aaKnown RBP8.49□□□□□ -1.05
ATG4A-201ENST00000343524 ARPP21Q9UBL0 812 aaPredicted RBP8.49□□□□□ -1.05
ATG4A-201ENST00000343524 GNPTGQ9UJJ9 305 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 TTLL3Q9Y4R7 772 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 SCINQ9Y6U3 715 aa8.49□□□□□ -1.05
ATG4A-201ENST00000343524 ARHGAP42A6NI28 874 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 TSPY2A6NKD2 308 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 SOBPA7XYQ1 873 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 POC1B-GALNT4F8VUJ3 575 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 EML1O00423 815 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 MCF2LO15068 1137 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 KRT18P05783 430 aaKnown RBP8.48□□□□□ -1.05
ATG4A-201ENST00000343524 VDRP11473 427 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 TSHRP16473 764 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 KRT4P19013 534 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 ADRA1DP25100 572 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 NFKBIAP25963 317 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 CHRNA5P30532 468 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 KCNJ1P48048 391 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 TRPC1P48995 793 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 ARL4CP56559 192 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 ZNF200P98182 395 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-201ENST00000343524 MESDQ14696 234 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 DRAP1Q14919 205 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-201ENST00000343524 HERC4Q5GLZ8 1057 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-201ENST00000343524 EFHC2Q5JST6 749 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 ATG16L1Q676U5 607 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 CYP4F22Q6NT55 531 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 ZFP1Q6P2D0 407 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 FBXL19Q6PCT2 694 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 KIF6Q6ZMV9 814 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 REXO1Q8N1G1 1221 aaKnown RBP8.48□□□□□ -1.05
ATG4A-201ENST00000343524 KCTD17Q8N5Z5 321 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 CHPT1Q8WUD6 406 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 SLC35C1Q96A29 364 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 C9orf72Q96LT7 481 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 CCDC138Q96M89 665 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 AGPAT1Q99943 283 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 HGH1Q9BTY7 390 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms