RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 CTSHP09668 335 aa19.59■□□□□ 0.73
HOXA9-201ENST00000343483 KRT17Q04695 432 aa19.59■□□□□ 0.73
HOXA9-201ENST00000343483 SPDYCQ5MJ68 293 aa19.59■□□□□ 0.73
HOXA9-201ENST00000343483 SMG8Q8ND04 991 aaKnown RBP19.59■□□□□ 0.73
HOXA9-201ENST00000343483 BCAS4Q8TDM0 211 aa19.59■□□□□ 0.73
HOXA9-201ENST00000343483 CCDC114Q96M63 670 aa19.59■□□□□ 0.73
HOXA9-201ENST00000343483 SLITRK1Q96PX8 696 aa19.59■□□□□ 0.73
HOXA9-201ENST00000343483 RABEP2Q9H5N1 569 aa19.59■□□□□ 0.73
HOXA9-201ENST00000343483 TRIP12Q14669 1992 aaPredicted RBP19.59■□□□□ 0.73
HOXA9-201ENST00000343483 RALGAPA2Q2PPJ7 1873 aa19.58■□□□□ 0.73
HOXA9-201ENST00000343483 XPOTO43592 962 aaKnown RBP19.58■□□□□ 0.73
HOXA9-201ENST00000343483 KRT10P13645 584 aa19.58■□□□□ 0.73
HOXA9-201ENST00000343483 KCNE1P15382 129 aa19.58■□□□□ 0.73
HOXA9-201ENST00000343483 GBP1P32455 592 aa19.58■□□□□ 0.73
HOXA9-201ENST00000343483 GABRB2P47870 512 aa19.58■□□□□ 0.73
HOXA9-201ENST00000343483 GSCP56915 257 aaPredicted RBP19.58■□□□□ 0.73
HOXA9-201ENST00000343483 SOWAHAQ2M3V2 549 aa19.58■□□□□ 0.73
HOXA9-201ENST00000343483 PPP1R26Q5T8A7 1209 aaPredicted RBP19.58■□□□□ 0.73
HOXA9-201ENST00000343483 FAM102AQ5T9C2 384 aaPredicted RBP19.58■□□□□ 0.73
HOXA9-201ENST00000343483 ARRDC4Q8NCT1 418 aa19.58■□□□□ 0.73
HOXA9-201ENST00000343483 BCCIPQ9P287 314 aaKnown RBP eCLIP19.58■□□□□ 0.73
HOXA9-201ENST00000343483 LRRD1A4D1F6 860 aa19.58■□□□□ 0.72
HOXA9-201ENST00000343483 PIRO00625 290 aa19.58■□□□□ 0.72
HOXA9-201ENST00000343483 HPDP32754 393 aaPredicted RBP19.58■□□□□ 0.72
HOXA9-201ENST00000343483 GUCY1A3Q02108 690 aa19.58■□□□□ 0.72
HOXA9-201ENST00000343483 CACNB2Q08289 660 aaPredicted RBP19.58■□□□□ 0.72
HOXA9-201ENST00000343483 MFSD7Q6UXD7 560 aa19.58■□□□□ 0.72
HOXA9-201ENST00000343483 RSPH3Q86UC2 560 aa19.58■□□□□ 0.72
HOXA9-201ENST00000343483 SLCO2A1Q92959 643 aa19.58■□□□□ 0.72
HOXA9-201ENST00000343483 ZNF560Q96MR9 790 aa19.58■□□□□ 0.72
HOXA9-201ENST00000343483 UPF3AQ9H1J1 476 aaKnown RBP19.58■□□□□ 0.72
HOXA9-201ENST00000343483 ZWILCHQ9H900 591 aa19.58■□□□□ 0.72
HOXA9-201ENST00000343483 XPNPEP3Q9NQH7 507 aa19.58■□□□□ 0.72
HOXA9-201ENST00000343483 HOMER3Q9NSC5 361 aa19.58■□□□□ 0.72
HOXA9-201ENST00000343483 RRP15Q9Y3B9 282 aaKnown RBP19.58■□□□□ 0.72
HOXA9-201ENST00000343483 NME7Q9Y5B8 376 aa19.58■□□□□ 0.72
HOXA9-201ENST00000343483 A8MXQ7 604 aa19.57■□□□□ 0.72
HOXA9-201ENST00000343483 KPNA7A9QM74 516 aa19.57■□□□□ 0.72
HOXA9-201ENST00000343483 E5RJQ4 531 aa19.57■□□□□ 0.72
HOXA9-201ENST00000343483 LRCH4O75427 683 aa19.57■□□□□ 0.72
HOXA9-201ENST00000343483 RGS7P49802 495 aa19.57■□□□□ 0.72
HOXA9-201ENST00000343483 PMS2P54278 862 aa19.57■□□□□ 0.72
HOXA9-201ENST00000343483 SOX4Q06945 474 aaPredicted RBP19.57■□□□□ 0.72
HOXA9-201ENST00000343483 IFFO1Q0D2I5 559 aa19.57■□□□□ 0.72
HOXA9-201ENST00000343483 STILQ15468 1287 aa19.57■□□□□ 0.72
HOXA9-201ENST00000343483 XKR4Q5GH76 650 aa19.57■□□□□ 0.72
HOXA9-201ENST00000343483 AGBL2Q5U5Z8 902 aa19.57■□□□□ 0.72
HOXA9-201ENST00000343483 SRLQ86TD4 932 aa19.57■□□□□ 0.72
HOXA9-201ENST00000343483 FNIP1Q8TF40 1166 aa19.57■□□□□ 0.72
HOXA9-201ENST00000343483 GRK7Q8WTQ7 553 aa19.57■□□□□ 0.72
HOXA9-201ENST00000343483 RAPGEF5Q92565 580 aa19.57■□□□□ 0.72
HOXA9-201ENST00000343483 WNT8BQ93098 351 aa19.57■□□□□ 0.72
HOXA9-201ENST00000343483 MCRS1Q96EZ8 462 aa19.57■□□□□ 0.72
HOXA9-201ENST00000343483 DDX56Q9NY93 547 aaKnown RBP19.57■□□□□ 0.72
HOXA9-201ENST00000343483 ASIC3Q9UHC3 531 aa19.57■□□□□ 0.72
HOXA9-201ENST00000343483 TRPV2Q9Y5S1 764 aa19.57■□□□□ 0.72
HOXA9-201ENST00000343483 SPTLC1O15269 473 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 HCRTO43612 131 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 GAS8O95995 478 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 PFKMP08237 780 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 ADCY2Q08462 1091 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 SMTNL2Q2TAL5 461 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 KRT71Q3SY84 523 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 SPOCD1Q6ZMY3 1216 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 ARFGAP2Q8N6H7 521 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 DPEP3Q9H4B8 488 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 TRIP11Q15643 1979 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 PNPLA4P41247 253 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 CCT5P48643 541 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 EIF3BP55884 814 aaKnown RBP19.56■□□□□ 0.72
HOXA9-201ENST00000343483 TRIP13Q15645 432 aaPredicted RBP19.56■□□□□ 0.72
HOXA9-201ENST00000343483 CCNG2Q16589 344 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 OR6B2Q6IFH4 312 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 ARFGAP1Q8N6T3 406 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 ZFP42Q96MM3 310 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 LPIN3Q9BQK8 851 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 HESX1Q9UBX0 185 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 MTRF1LQ9UGC7 380 aaKnown RBP19.56■□□□□ 0.72
HOXA9-201ENST00000343483 FEZ2Q9UHY8 353 aaPredicted RBP19.56■□□□□ 0.72
HOXA9-201ENST00000343483 ST3GAL5Q9UNP4 418 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 SCN1AP35498 2009 aa19.56■□□□□ 0.72
HOXA9-201ENST00000343483 TULP2O00295 520 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 TJP3O95049 919 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 PDGFRBP09619 1106 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 ELNP15502 786 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 CCND3P30281 292 aaPredicted RBP19.55■□□□□ 0.72
HOXA9-201ENST00000343483 LSP1P33241 339 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 MDH1P40925 334 aaKnown RBP19.55■□□□□ 0.72
HOXA9-201ENST00000343483 TAF6P49848 677 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 SLC25A11Q02978 314 aaKnown RBP19.55■□□□□ 0.72
HOXA9-201ENST00000343483 CALCOCO2Q13137 446 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 HADHQ16836 314 aaKnown RBP19.55■□□□□ 0.72
HOXA9-201ENST00000343483 KCNT1Q5JUK3 1230 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 FAM183BPQ6ZVS7 135 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 POLNQ7Z5Q5 900 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 UNC93AQ86WB7 457 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 TTC30AQ86WT1 665 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 ATL2Q8NHH9 583 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 TSPAN18Q96SJ8 248 aa19.55■□□□□ 0.72
HOXA9-201ENST00000343483 MIS12Q9H081 205 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms