RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 NGRNQ9NPE2 291 aaKnown RBP17.29■□□□□ 0.36
SNED1-202ENST00000342631 HSFX1Q9UBD0 423 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 PCDHB5Q9Y5E4 795 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 CDY1Q9Y6F8 540 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 PTPRDP23468 1912 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 A0A1W2PPC1 479 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 XPO1O14980 1071 aaKnown RBP17.29■□□□□ 0.36
SNED1-202ENST00000342631 PJA2O43164 708 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 CALB1P05937 261 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 MMP8P22894 467 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 MAGEA11P43364 429 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 PLA2G4AP47712 749 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 PTPN14Q15678 1187 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 VSTM1Q6UX27 236 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 ERICH1Q86X53 443 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 C1orf131Q8NDD1 294 aaKnown RBP17.29■□□□□ 0.36
SNED1-202ENST00000342631 CPA5Q8WXQ8 436 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 SECISBP2LQ93073 1101 aaKnown RBP17.29■□□□□ 0.36
SNED1-202ENST00000342631 HSFY1Q96LI6 401 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 CLSTN3Q9BQT9 956 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 PNPLA8Q9NP80 782 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 KRT82Q9NSB4 513 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 TMLHEQ9NVH6 421 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 TAS2R14Q9NYV8 317 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 STRIP2Q9ULQ0 834 aa17.29■□□□□ 0.36
SNED1-202ENST00000342631 H3BNC9 293 aa17.28■□□□□ 0.36
SNED1-202ENST00000342631 TMEM253P0C7T8 217 aa17.28■□□□□ 0.36
SNED1-202ENST00000342631 PBX2P40425 430 aa17.28■□□□□ 0.36
SNED1-202ENST00000342631 RPL34P49207 117 aaKnown RBP17.28■□□□□ 0.36
SNED1-202ENST00000342631 NDUFV1P49821 464 aa17.28■□□□□ 0.36
SNED1-202ENST00000342631 PDE4CQ08493 712 aa17.28■□□□□ 0.36
SNED1-202ENST00000342631 KIF5AQ12840 1032 aa17.28■□□□□ 0.36
SNED1-202ENST00000342631 PDCLQ13371 301 aa17.28■□□□□ 0.36
SNED1-202ENST00000342631 RAB33AQ14088 237 aa17.28■□□□□ 0.36
SNED1-202ENST00000342631 PPP2R2DQ66LE6 453 aa17.28■□□□□ 0.36
SNED1-202ENST00000342631 MON1BQ7L1V2 547 aa17.28■□□□□ 0.36
SNED1-202ENST00000342631 TMC7Q7Z402 723 aa17.28■□□□□ 0.36
SNED1-202ENST00000342631 MCOLN2Q8IZK6 566 aa17.28■□□□□ 0.36
SNED1-202ENST00000342631 UBA3Q8TBC4 463 aa17.28■□□□□ 0.36
SNED1-202ENST00000342631 CTNNBL1Q8WYA6 563 aaPredicted RBP17.28■□□□□ 0.36
SNED1-202ENST00000342631 SLC28A3Q9HAS3 691 aa17.28■□□□□ 0.36
SNED1-202ENST00000342631 TLR9Q9NR96 1032 aa17.28■□□□□ 0.36
SNED1-202ENST00000342631 ADAM22Q9P0K1 906 aa17.28■□□□□ 0.36
SNED1-202ENST00000342631 MYH10P35580 1976 aa17.27■□□□□ 0.36
SNED1-202ENST00000342631 BTNL10A8MVZ5 291 aa17.27■□□□□ 0.36
SNED1-202ENST00000342631 TMCO5BA8MYB1 307 aa17.27■□□□□ 0.36
SNED1-202ENST00000342631 C2CD2LO14523 706 aa17.27■□□□□ 0.36
SNED1-202ENST00000342631 AP1G2O75843 785 aa17.27■□□□□ 0.36
SNED1-202ENST00000342631 ARHGEF15O94989 841 aa17.27■□□□□ 0.36
SNED1-202ENST00000342631 C1RP00736 705 aa17.27■□□□□ 0.36
SNED1-202ENST00000342631 SSTR3P32745 418 aaPredicted RBP17.27■□□□□ 0.36
SNED1-202ENST00000342631 OR1D2P34982 312 aa17.27■□□□□ 0.36
SNED1-202ENST00000342631 ACADSBP45954 432 aa17.27■□□□□ 0.36
SNED1-202ENST00000342631 GALCP54803 685 aa17.27■□□□□ 0.36
SNED1-202ENST00000342631 ROR1Q01973 937 aa17.27■□□□□ 0.36
SNED1-202ENST00000342631 SMC1AQ14683 1233 aaKnown RBP17.27■□□□□ 0.36
SNED1-202ENST00000342631 RSPO2Q6UXX9 243 aaPredicted RBP17.27■□□□□ 0.36
SNED1-202ENST00000342631 CLEC20AQ6ZU45 233 aa17.27■□□□□ 0.36
SNED1-202ENST00000342631 CCAR2Q8N163 923 aaKnown RBP17.27■□□□□ 0.36
SNED1-202ENST00000342631 ZNF461Q8TAF7 563 aa17.27■□□□□ 0.36
SNED1-202ENST00000342631 IPO4Q8TEX9 1081 aaKnown RBP17.27■□□□□ 0.36
SNED1-202ENST00000342631 POF1BQ8WVV4 589 aa17.27■□□□□ 0.36
SNED1-202ENST00000342631 KCTD13Q8WZ19 329 aa17.27■□□□□ 0.36
SNED1-202ENST00000342631 PPP1R13BQ96KQ4 1090 aa17.27■□□□□ 0.36
SNED1-202ENST00000342631 SLC4A5Q9BY07 1137 aa17.27■□□□□ 0.36
SNED1-202ENST00000342631 LMAN2LQ9H0V9 348 aa17.27■□□□□ 0.36
SNED1-202ENST00000342631 ALG13Q9NP73 1137 aaKnown RBP17.27■□□□□ 0.36
SNED1-202ENST00000342631 DMAP1Q9NPF5 467 aaPredicted RBP17.27■□□□□ 0.36
SNED1-202ENST00000342631 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.27■□□□□ 0.36
SNED1-202ENST00000342631 CLDN5O00501 218 aa17.27■□□□□ 0.35
SNED1-202ENST00000342631 KRT86O43790 486 aa17.27■□□□□ 0.35
SNED1-202ENST00000342631 LPXNO60711 386 aa17.27■□□□□ 0.35
SNED1-202ENST00000342631 ABLIM3O94929 683 aa17.27■□□□□ 0.35
SNED1-202ENST00000342631 CXCL14O95715 111 aa17.27■□□□□ 0.35
SNED1-202ENST00000342631 OR4Q2P0C623 313 aa17.27■□□□□ 0.35
SNED1-202ENST00000342631 GABRB2P47870 512 aa17.27■□□□□ 0.35
SNED1-202ENST00000342631 GSCP56915 257 aaPredicted RBP17.27■□□□□ 0.35
SNED1-202ENST00000342631 GPC5P78333 572 aa17.27■□□□□ 0.35
SNED1-202ENST00000342631 CCDC142Q17RM4 750 aa17.27■□□□□ 0.35
SNED1-202ENST00000342631 LIN9Q5TKA1 542 aa17.27■□□□□ 0.35
SNED1-202ENST00000342631 CALR3Q96L12 384 aaKnown RBP17.27■□□□□ 0.35
SNED1-202ENST00000342631 CEP295NLQ96MC4 621 aa17.27■□□□□ 0.35
SNED1-202ENST00000342631 TCF25Q9BQ70 676 aa17.27■□□□□ 0.35
SNED1-202ENST00000342631 EMILIN2Q9BXX0 1053 aa17.27■□□□□ 0.35
SNED1-202ENST00000342631 NKX2-4Q9H2Z4 354 aa17.27■□□□□ 0.35
SNED1-202ENST00000342631 ENTPD7Q9NQZ7 604 aa17.27■□□□□ 0.35
SNED1-202ENST00000342631 WDR35Q9P2L0 1181 aa17.27■□□□□ 0.35
SNED1-202ENST00000342631 AFF4Q9UHB7 1163 aaKnown RBP17.27■□□□□ 0.35
SNED1-202ENST00000342631 A0A0A6YYK5 440 aaPredicted RBP17.26■□□□□ 0.35
SNED1-202ENST00000342631 MTMR11A4FU01 709 aa17.26■□□□□ 0.35
SNED1-202ENST00000342631 TRIM66O15016 1216 aa17.26■□□□□ 0.35
SNED1-202ENST00000342631 BDNFP23560 247 aa17.26■□□□□ 0.35
SNED1-202ENST00000342631 ARPP19P56211 112 aa17.26■□□□□ 0.35
SNED1-202ENST00000342631 GPM6BQ13491 265 aa17.26■□□□□ 0.35
SNED1-202ENST00000342631 CHRDL2Q6WN34 429 aa17.26■□□□□ 0.35
SNED1-202ENST00000342631 TMEM110Q86TL2 294 aa17.26■□□□□ 0.35
SNED1-202ENST00000342631 ZDHHC17Q8IUH5 632 aa17.26■□□□□ 0.35
SNED1-202ENST00000342631 C18orf8Q96DM3 657 aa17.26■□□□□ 0.35
SNED1-202ENST00000342631 AVENQ9NQS1 362 aaPredicted RBP17.26■□□□□ 0.35
SNED1-202ENST00000342631 ABI2Q9NYB9 513 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms