RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 TBC1D12O60347 775 aa19.33■□□□□ 0.69
SMPD1-201ENST00000342245 CRTAMO95727 393 aa19.33■□□□□ 0.69
SMPD1-201ENST00000342245 BCAP31P51572 246 aa19.33■□□□□ 0.69
SMPD1-201ENST00000342245 SLC18A2Q05940 514 aa19.33■□□□□ 0.69
SMPD1-201ENST00000342245 POTEAQ6S8J7 498 aa19.33■□□□□ 0.69
SMPD1-201ENST00000342245 PCGF5Q86SE9 256 aa19.33■□□□□ 0.69
SMPD1-201ENST00000342245 KBTBD6Q86V97 674 aa19.33■□□□□ 0.69
SMPD1-201ENST00000342245 NUF2Q9BZD4 464 aa19.33■□□□□ 0.69
SMPD1-201ENST00000342245 ITGA11Q9UKX5 1188 aa19.33■□□□□ 0.69
SMPD1-201ENST00000342245 TSC22D4Q9Y3Q8 395 aa19.33■□□□□ 0.69
SMPD1-201ENST00000342245 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.33■□□□□ 0.69
SMPD1-201ENST00000342245 MAST2Q6P0Q8 1798 aa19.33■□□□□ 0.69
SMPD1-201ENST00000342245 SOBPA7XYQ1 873 aa19.33■□□□□ 0.68
SMPD1-201ENST00000342245 ZNF701M0R085 212 aaPredicted RBP19.33■□□□□ 0.68
SMPD1-201ENST00000342245 POLR2MP0CAP2 368 aa19.33■□□□□ 0.68
SMPD1-201ENST00000342245 HMOX2P30519 316 aa19.33■□□□□ 0.68
SMPD1-201ENST00000342245 ERFP50548 548 aa19.33■□□□□ 0.68
SMPD1-201ENST00000342245 MECOMQ03112 1051 aa19.33■□□□□ 0.68
SMPD1-201ENST00000342245 ZBTB17Q13105 803 aa19.33■□□□□ 0.68
SMPD1-201ENST00000342245 SLC15A2Q16348 729 aa19.33■□□□□ 0.68
SMPD1-201ENST00000342245 MEX3CQ5U5Q3 659 aaKnown RBP19.33■□□□□ 0.68
SMPD1-201ENST00000342245 CLEC4GQ6UXB4 293 aa19.33■□□□□ 0.68
SMPD1-201ENST00000342245 STXBP4Q6ZWJ1 553 aa19.33■□□□□ 0.68
SMPD1-201ENST00000342245 PQLC1Q8N2U9 271 aa19.33■□□□□ 0.68
SMPD1-201ENST00000342245 LMO3Q8TAP4 145 aa19.33■□□□□ 0.68
SMPD1-201ENST00000342245 TTC17Q96AE7 1141 aa19.33■□□□□ 0.68
SMPD1-201ENST00000342245 PPP1R10Q96QC0 940 aaKnown RBP19.33■□□□□ 0.68
SMPD1-201ENST00000342245 STN1Q9H668 368 aaKnown RBP19.33■□□□□ 0.68
SMPD1-201ENST00000342245 NOCTQ9UK39 431 aaKnown RBP19.33■□□□□ 0.68
SMPD1-201ENST00000342245 AP4B1Q9Y6B7 739 aa19.33■□□□□ 0.68
SMPD1-201ENST00000342245 SF3B1O75533 1304 aaKnown RBP eCLIP19.33■□□□□ 0.68
SMPD1-201ENST00000342245 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.32■□□□□ 0.68
SMPD1-201ENST00000342245 C2orf71A6NGG8 1288 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 CYP26A1O43174 497 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 MED24O75448 989 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 OCM2P0CE71 109 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 OCMP0CE72 109 aaPredicted RBP19.32■□□□□ 0.68
SMPD1-201ENST00000342245 CIAPIN1Q6FI81 312 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 ZNF746Q6NUN9 644 aaPredicted RBP19.32■□□□□ 0.68
SMPD1-201ENST00000342245 LPCAT2Q7L5N7 544 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 CPNE8Q86YQ8 564 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 ADCY4Q8NFM4 1077 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 EPS8L1Q8TE68 723 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 LAMB2P55268 1798 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 PSTPIP1O43586 416 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 ADAM23O75077 832 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 CLASP2O75122 1294 aaKnown RBP19.32■□□□□ 0.68
SMPD1-201ENST00000342245 ESRRBO95718 433 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 SEPT6Q14141 434 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 DEPDC1Q5TB30 811 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 NIPAL1Q6NVV3 410 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 KSR1Q8IVT5 923 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 DDHD1Q8NEL9 900 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 MRRFQ96E11 262 aaKnown RBP19.32■□□□□ 0.68
SMPD1-201ENST00000342245 ZMAT2Q96NC0 199 aaKnown RBP19.32■□□□□ 0.68
SMPD1-201ENST00000342245 CCDC68Q9H2F9 335 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 VAT1LQ9HCJ6 419 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 ALG13Q9NP73 1137 aaKnown RBP19.32■□□□□ 0.68
SMPD1-201ENST00000342245 PALMDQ9NP74 551 aa19.32■□□□□ 0.68
SMPD1-201ENST00000342245 ASTN2O75129 1339 aaPredicted RBP19.32■□□□□ 0.68
SMPD1-201ENST00000342245 PRR5-ARHGAP8B1AHC4 643 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 RALAP11233 206 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 RFC4P35249 363 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 ALDH3B2P48448 385 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 CLK2P49760 499 aaKnown RBP19.31■□□□□ 0.68
SMPD1-201ENST00000342245 ARHGAP8P85298 464 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 FASTKD3Q14CZ7 662 aaKnown RBP19.31■□□□□ 0.68
SMPD1-201ENST00000342245 CRLF3Q8IUI8 442 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 LZTR1Q8N653 840 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 TRPC7Q9HCX4 862 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 VPS45Q9NRW7 570 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 DMAC2Q9NW81 257 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 CDH22Q9UJ99 828 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 TRIM17Q9Y577 477 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 SCN7AQ01118 1682 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 NUP98P52948 1817 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 USP17L8P0C7I0 530 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 PRDX6P30041 224 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 COPAP53621 1224 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 WASHC5Q12768 1159 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 MYBPC2Q14324 1141 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 ZNF829Q3KNS6 432 aaPredicted RBP19.31■□□□□ 0.68
SMPD1-201ENST00000342245 ZNF34Q8IZ26 560 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 TRIML2Q8N7C3 387 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 DCAKDQ8WVC6 231 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 FAM111AQ96PZ2 611 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 SMYD3Q9H7B4 428 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 CHORDC1Q9UHD1 332 aaPredicted RBP19.31■□□□□ 0.68
SMPD1-201ENST00000342245 BCAP29Q9UHQ4 241 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 ANAPC7Q9UJX3 599 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 POMPQ9Y244 141 aa19.31■□□□□ 0.68
SMPD1-201ENST00000342245 CTDP1Q9Y5B0 961 aaPredicted RBP19.31■□□□□ 0.68
SMPD1-201ENST00000342245 FAM189A1O60320 539 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 RPA1P27694 616 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 GYG1P46976 350 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 ENTPD1P49961 510 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 BFSP1Q12934 665 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 LLGL1Q15334 1064 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 MDH1BQ5I0G3 518 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 ZFP1Q6P2D0 407 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms