RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ADCK2Q7Z695 626 aa13.4□□□□□ -0.27
LIN54-201ENST00000340417 ZNF557Q8N988 423 aaPredicted RBP13.4□□□□□ -0.27
LIN54-201ENST00000340417 NWD2Q9ULI1 1742 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 KCNA2P16389 499 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 ATP5C1P36542 298 aaKnown RBP13.39□□□□□ -0.27
LIN54-201ENST00000340417 ATP11CQ8NB49 1132 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 UBXN6Q9BZV1 441 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 DNAJC17Q9NVM6 304 aaKnown RBP13.39□□□□□ -0.27
LIN54-201ENST00000340417 ANKRD63C9JTQ0 380 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 AP3B1O00203 1094 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 CCDC130P13994 396 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 CDC25CP30307 473 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 CEP85LQ5SZL2 805 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 CEP120Q8N960 986 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 SERPINB11Q96P15 392 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 OR6C75A6NL08 312 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 CHEK2O96017 543 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 MT-ND3P03897 115 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 PTPN1P18031 435 aaKnown RBP13.39□□□□□ -0.27
LIN54-201ENST00000340417 GRM5P41594 1212 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 SMTNL2Q2TAL5 461 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 ZNF618Q5T7W0 954 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 ZNF507Q8TCN5 953 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 GTF2IRD1Q9UHL9 959 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 ZDHHC9Q9Y397 364 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 C2orf54Q08AI8 447 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 SLFN11Q7Z7L1 901 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 HS6ST3Q8IZP7 471 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 PXYLP1Q8TE99 480 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 ULK4Q96C45 1275 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 EPB41L5Q9HCM4 733 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 CDH9Q9ULB4 789 aa13.39□□□□□ -0.27
LIN54-201ENST00000340417 PHF20L1A8MW92 1017 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 FGFR1P11362 822 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 RETSATQ6NUM9 610 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 SRPK1Q96SB4 655 aaKnown RBP13.38□□□□□ -0.27
LIN54-201ENST00000340417 DRC3Q9H069 523 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 COL20A1Q9P218 1284 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 ZNF536O15090 1300 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 PPP1R11O60927 126 aaPredicted RBP13.38□□□□□ -0.27
LIN54-201ENST00000340417 ALDH1A2O94788 518 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 DDHD2O94830 711 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 GPS1Q13098 491 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 SAYSD1Q9NPB0 183 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 MID2Q9UJV3 735 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 SGPL1O95470 568 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 NFICP08651 508 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 ARF4P18085 180 aaPredicted RBP13.38□□□□□ -0.27
LIN54-201ENST00000340417 GABRR2P28476 465 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 CDH8P55286 799 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 AAK1Q2M2I8 961 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 RASSF3Q86WH2 238 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 ENGASEQ8NFI3 743 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 TROVE2P10155 538 aaKnown RBP eCLIP13.38□□□□□ -0.27
LIN54-201ENST00000340417 BRCC3P46736 316 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 RRP1BQ14684 758 aaKnown RBP13.38□□□□□ -0.27
LIN54-201ENST00000340417 C1orf186Q6ZWK4 172 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 ANO5Q75V66 913 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 IPMKQ8NFU5 416 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 HAS1Q92839 578 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 EVA1BQ9NVM1 165 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 CHORDC1Q9UHD1 332 aaPredicted RBP13.38□□□□□ -0.27
LIN54-201ENST00000340417 GTF3C4Q9UKN8 822 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 RGPD2P0DJD1 1756 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 GALCP54803 685 aa13.38□□□□□ -0.27
LIN54-201ENST00000340417 IGKV6D-41A0A0C4DH26 115 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 NVLO15381 856 aaKnown RBP13.37□□□□□ -0.27
LIN54-201ENST00000340417 VCLP18206 1134 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 SMAD1Q15797 465 aaKnown RBP13.37□□□□□ -0.27
LIN54-201ENST00000340417 BOLA3Q53S33 107 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 SLC35G2Q8TBE7 412 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 CDC23Q9UJX2 597 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 ATMINO43313 823 aaPredicted RBP13.37□□□□□ -0.27
LIN54-201ENST00000340417 P3H1Q32P28 736 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 SLC45A4Q5BKX6 768 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 TRIM65Q6PJ69 517 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 TRIM67Q6ZTA4 783 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 MFN1Q8IWA4 741 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 LGI2Q8N0V4 545 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 TRIB2Q92519 343 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.37□□□□□ -0.27
LIN54-201ENST00000340417 ATP8A1Q9Y2Q0 1164 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 MRPS17Q9Y2R5 130 aaKnown RBP13.37□□□□□ -0.27
LIN54-201ENST00000340417 CASZ1Q86V15 1759 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 NDUFS3O75489 264 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 ACAD10Q6JQN1 1059 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 TEPSINQ96N21 525 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 OMDQ99983 421 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 ZNF284Q2VY69 593 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 CCDC62Q6P9F0 684 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 TSPAN18Q96SJ8 248 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 CENPKQ9BS16 269 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 ZNF518BQ9C0D4 1074 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 MIR1-1HGQ9H1L0 117 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 CRLS1Q9UJA2 301 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 DNMT3LQ9UJW3 386 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 FBXO10Q9UK96 956 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 CDY1Q9Y6F8 540 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 MTSS1O43312 755 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 AKAP3O75969 853 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms