RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 TFAP2BQ92481 460 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 WDR83Q9BRX9 315 aaKnown RBP16.9■□□□□ 0.3
SCARB1-202ENST00000339570 RNF146Q9NTX7 359 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 C2CD2Q9Y426 696 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 FCHO1O14526 889 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 ALOX15BO15296 676 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 EXTL3O43909 919 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 PHBP35232 272 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 NEK3P51956 506 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 PARP6Q2NL67 630 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 TTLL6Q8N841 843 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 PXMP2Q9NR77 195 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 PACSIN3Q9UKS6 424 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 MAGED2Q9UNF1 606 aaPredicted RBP16.9■□□□□ 0.3
SCARB1-202ENST00000339570 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.9■□□□□ 0.3
SCARB1-202ENST00000339570 GSC2O15499 205 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 PRPF4O43172 522 aaKnown RBP eCLIP16.9■□□□□ 0.36e-7■■□□□ 12.4
SCARB1-202ENST00000339570 RBP3P10745 1247 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 CHRM1P11229 460 aaPredicted RBP16.9■□□□□ 0.3
SCARB1-202ENST00000339570 SKIV2L2P42285 1042 aaKnown RBP16.9■□□□□ 0.3
SCARB1-202ENST00000339570 EIF3EP60228 445 aaKnown RBP16.9■□□□□ 0.3
SCARB1-202ENST00000339570 MORF4L2Q15014 288 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 PLEKHA7Q6IQ23 1121 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 CDHR3Q6ZTQ4 885 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 POU5F2Q8N7G0 328 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 NSL1Q96IY1 281 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 BTBD10Q9BSF8 475 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 CYP26B1Q9NR63 512 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 TAS2R1Q9NYW7 299 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 STOML1Q9UBI4 398 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 POLIQ9UNA4 740 aa16.9■□□□□ 0.3
SCARB1-202ENST00000339570 TMEM191CA6NGB0 347 aa16.89■□□□□ 0.29
SCARB1-202ENST00000339570 ARHGAP42A6NI28 874 aa16.89■□□□□ 0.29
SCARB1-202ENST00000339570 TRIM49D1C9J1S8 452 aa16.89■□□□□ 0.29
SCARB1-202ENST00000339570 CCDC22O60826 627 aa16.89■□□□□ 0.29
SCARB1-202ENST00000339570 TMEM191BP0C7N4 346 aa16.89■□□□□ 0.29
SCARB1-202ENST00000339570 MUTP22033 750 aa16.89■□□□□ 0.29
SCARB1-202ENST00000339570 GRIK3Q13003 919 aa16.89■□□□□ 0.29
SCARB1-202ENST00000339570 TRPC3Q13507 836 aa16.89■□□□□ 0.29
SCARB1-202ENST00000339570 MCF2L2Q86YR7 1114 aa16.89■□□□□ 0.29
SCARB1-202ENST00000339570 DCLRE1BQ9H816 532 aa16.89■□□□□ 0.29
SCARB1-202ENST00000339570 CYP4F11Q9HBI6 524 aa16.89■□□□□ 0.29
SCARB1-202ENST00000339570 GMPRP36959 345 aa16.89■□□□□ 0.29
SCARB1-202ENST00000339570 PSMC1P62191 440 aaKnown RBP16.89■□□□□ 0.29
SCARB1-202ENST00000339570 DENND1BQ6P3S1 775 aa16.89■□□□□ 0.29
SCARB1-202ENST00000339570 KCTD17Q8N5Z5 321 aa16.89■□□□□ 0.29
SCARB1-202ENST00000339570 SPATA18Q8TC71 538 aa16.89■□□□□ 0.29
SCARB1-202ENST00000339570 RPAP3Q9H6T3 665 aaPredicted RBP16.89■□□□□ 0.29
SCARB1-202ENST00000339570 ACTL7BQ9Y614 415 aa16.89■□□□□ 0.29
SCARB1-202ENST00000339570 CDKN2BP42772 138 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 JAK3P52333 1124 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 KRT76Q01546 638 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 CCDC15Q0P6D6 951 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 EMC2Q15006 297 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 RASA2Q15283 850 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 RIBC1Q8N443 379 aaPredicted RBP16.88■□□□□ 0.29
SCARB1-202ENST00000339570 PPP1R14CQ8TAE6 165 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 INPP5DQ92835 1189 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 AKT1S1Q96B36 256 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 CISHQ9NSE2 258 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 SIPA1L1O43166 1804 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 GJB1P08034 283 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 ETS2P15036 469 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 EPHB1P54762 984 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 IRX1P78414 480 aaPredicted RBP16.88■□□□□ 0.29
SCARB1-202ENST00000339570 PEX6Q13608 980 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 SLC45A4Q5BKX6 768 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 MROH9Q5TGP6 573 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 SNRNP48Q6IEG0 339 aaKnown RBP16.88■□□□□ 0.29
SCARB1-202ENST00000339570 LRRC74BQ6ZQY2 392 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 AGR3Q8TD06 166 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 FAM151AQ8WW52 585 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 ATP6V0A1Q93050 837 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 MMP19Q99542 508 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 PAPOLBQ9NRJ5 636 aaKnown RBP16.88■□□□□ 0.29
SCARB1-202ENST00000339570 PCMTD2Q9NV79 361 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 FOCADQ5VW36 1801 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 KLRG2A4D1S0 409 aaPredicted RBP16.88■□□□□ 0.29
SCARB1-202ENST00000339570 C2CD2LO14523 706 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 KRT3P12035 628 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 VHLP40337 213 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 SERPINB4P48594 390 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 ACTR2P61160 394 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 AP1ARQ63HQ0 302 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 ENOSF1Q7L5Y1 443 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 KIAA0319LQ8IZA0 1049 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 CEP120Q8N960 986 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 PPFIBP2Q8ND30 876 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 FAF2Q96CS3 445 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 RAB6BQ9NRW1 208 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 SLC17A6Q9P2U8 582 aa16.88■□□□□ 0.29
SCARB1-202ENST00000339570 COPEO14579 308 aa16.87■□□□□ 0.29
SCARB1-202ENST00000339570 ZWINTO95229 277 aa16.87■□□□□ 0.29
SCARB1-202ENST00000339570 MMP8P22894 467 aa16.87■□□□□ 0.29
SCARB1-202ENST00000339570 SP100P23497 879 aaPredicted RBP16.87■□□□□ 0.29
SCARB1-202ENST00000339570 PTGER2P43116 358 aa16.87■□□□□ 0.29
SCARB1-202ENST00000339570 FSTL1Q12841 308 aa16.87■□□□□ 0.29
SCARB1-202ENST00000339570 PTP4A2Q12974 167 aa16.87■□□□□ 0.29
SCARB1-202ENST00000339570 UBAP2LQ14157 1087 aaKnown RBP16.87■□□□□ 0.29
SCARB1-202ENST00000339570 SLC30A9Q6PML9 568 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms