RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 ZMAT5Q9UDW3 170 aaKnown RBP10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 EXOC1LA0A1B0GW35 172 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 ATP2A1O14983 1001 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 MTRF1O75570 445 aaKnown RBP10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 BAIAP3O94812 1187 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 GH2P01242 217 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 P4HA1P13674 534 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 BMPR1AP36894 532 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 GRM5P41594 1212 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 KRT17Q04695 432 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 NME3Q13232 169 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 RASGRF1Q13972 1273 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 WTAPQ15007 396 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 ZNF829Q3KNS6 432 aaPredicted RBP10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 CDONQ4KMG0 1287 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 TWF2Q6IBS0 349 aaKnown RBP10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 LRRC55Q6ZSA7 311 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 SLFN11Q7Z7L1 901 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 RPAP3Q9H6T3 665 aaPredicted RBP10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 POLE4Q9NR33 117 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 RABGEF1Q9UJ41 708 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 GNEQ9Y223 722 aaKnown RBP10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 WNK3Q9BYP7 1800 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 C1orf232A0A0U1RR37 186 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 PRR5-ARHGAP8B1AHC4 643 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 TAF4O00268 1085 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 TATP17735 454 aaPredicted RBP10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 STAT2P52630 851 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 CTAG1AP78358 180 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 ARHGAP8P85298 464 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 CHRNA2Q15822 529 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 PCNX4Q63HM2 1172 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 IRF2BP2Q7Z5L9 587 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 HPS6Q86YV9 775 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 LRRC49Q8IUZ0 686 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 ZNF654Q8IZM8 581 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 FANCBQ8NB91 859 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 NGDNQ8NEJ9 315 aaKnown RBP10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 TBCBQ99426 244 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 NUDT12Q9BQG2 462 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 EPS8L2Q9H6S3 715 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 ZNF696Q9H7X3 374 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 AS3MTQ9HBK9 375 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 HOXC10Q9NYD6 342 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 KLQ9UEF7 1012 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 ATP11BQ9Y2G3 1177 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 USP6P35125 1406 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 CFAP99D6REC4 459 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 MEN1O00255 615 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 ZMPSTE24O75844 475 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 TSPAN9O75954 239 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 ESRRBO95718 433 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 PRKCAP17252 672 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 PTPN2P17706 415 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 ANXA13P27216 316 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 GCAP28676 217 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 ATG9AQ7Z3C6 839 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 HEATR4Q86WZ0 1026 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 LSMEM1Q8N8F7 131 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 TANKQ92844 425 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 FAM89AQ96GI7 184 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 TSSK1BQ9BXA7 367 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 NOL6Q9H6R4 1146 aaKnown RBP10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 PARVGQ9HBI0 331 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 GPAMQ9HCL2 828 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 KBTBD4Q9NVX7 518 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 FKBP14Q9NWM8 211 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 PARP2Q9UGN5 583 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 DCCP43146 1447 aa10.07□□□□□ -0.8
PTCHD4-201ENST00000339488 DDX60Q8IY21 1712 aaKnown RBP10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 FAM205AQ6ZU69 1335 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 TRAF5O00463 557 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 STAM2O75886 525 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 KRT4P19013 534 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 GRK2P25098 689 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 DRG2P55039 364 aaKnown RBP10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 EIF3EP60228 445 aaKnown RBP10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 KRT76Q01546 638 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 HIC1Q14526 733 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 NRF1Q16656 503 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 RABL6Q3YEC7 729 aaPredicted RBP10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 DALRD3Q5D0E6 543 aaKnown RBP10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 GALNT18Q6P9A2 607 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 SETD3Q86TU7 594 aaPredicted RBP10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 GLYCTKQ8IVS8 523 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 AHI1Q8N157 1196 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 HDAC2Q92769 488 aaKnown RBP10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 MED30Q96HR3 178 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 CCDC138Q96M89 665 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 WRNIP1Q96S55 665 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 SLC2A11Q9BYW1 496 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 DCLK3Q9C098 648 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 MCM9Q9NXL9 1143 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 TAS2R14Q9NYV8 317 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 HERC5Q9UII4 1024 aaKnown RBP10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 SPEF1Q9Y4P9 236 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 CROCCQ5TZA2 2017 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 CCDC195A0A1B0GUA6 201 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 H3BNX3 289 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms